<List of Series> <Series: SHL8-D> <Clone: SHL875> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Clone SHL875
Dictyostelium discoideum cDNA Project Home
Sequence SHL875
AAAATAATAA ATTTACTATC AAATAACTAT TTTTTCTTTT CTTTCTTTTT
AAAGTTTAAA TAATAGAAAT AATAAAAATT AATATTAAAA AAAAGGAACG
TTAAAAAAAA AA-------- --AAATTCAT AATTCCAATT TGAATAAAGC
AGTTCAAGAG GCTGAAGAAA TTGAAAGACA ACAAAATGGT AATGGTTCAC
CTGCTGTAAA CTCTCATAAG ATTGTAACTC AAATGGGAAA TGTTGAAAAT
AATGAAATTA CCAATGAACA AGATGCCATT GAACAAGCTC AACATTTACA
ACGTATTGAA AATGGTGAAG ATATCGATGA GTATGAAGCT GCCCAACATG
AAGTTGCCTT TTTAGATGAA AATGAACAAG ATGCTGCTAA ATTACAAAAT
GAAATGGACC AATTAGAACT CTTACTTGAA GAGAATGAAG AAGAACAATT
TTCAAATAAA AATTTACAAC AACTTAATGA GAATGAAAAT CAACAACAAC
AACAAGGACA ACAACAAGTT CAAGCAACAA ATGTTGAACA ACAAATCGTT
GAACAACTTA AAGTTATCAA AGAATTTCAA AGACAAGATC AACAAAAGAA
ACAAAAAATT CAACAAGAGA ACGATGCTGT CTACTTGAGT GATGTTGAAA
AAGCTCAACT TGAATTGGAT GCTGAATTGG CTAAAAATAA TAAACAAGAG
AATCAAGATG AGAATTTAGT TCAAGAGAAA CAACAATCTC CTGACCAAAT
TAAAAATCAA TTAAAAAATA TTCAACATGA ACAACAAATC CAAGAACAAC
AAGATAAATT AAATCAAGAA GAAAATCAAC AATTATTAGA ACAAGAACAA
AATCAAAAAT AATTTAATCA TTNCTTTNCT TTTTAAAAAA CTA
Translated Amino Acid Sequence SHL875
<All Frames>
kiinllsnnyfffsfflkfk**k**KLILKKRNVKKK---
---IHNSNLNKAVQEAEEIERQQNGNGSPAVNSHKIVTQMGNVENNEITNEQDAIEQAQH
LQRIENGEDIDEYEAAQHEVAFLDENEQDAAKLQNEMDQLELLLEENEEEQFSNKNLQQL
NENENQQQQQGQQQVQATNVEQQIVEQLKVIKEFQRQDQQKKQKIQQENDAVYLSDVEKA
QLELDAELAKNNKQENQDENLVQEKQQSPDQIKNQLKNIQHEQQIQEQQDKLNQEENQQL
LEQEQNQK*fnhxfxf*kt
Homology SHL875 vs CSM-cDNA
<more CSM info>
Sequences producing significant alignments: (bits) Value
SHL875 (SHL875Q) /CSM/SH/SHL8-D/SHL875Q.Seq.d/ 729 0.0
SHL866 (SHL866Q) /CSM/SH/SHL8-C/SHL866Q.Seq.d/ 729 0.0
SHL857 (SHL857Q) /CSM/SH/SHL8-C/SHL857Q.Seq.d/ 729 0.0
SHL828 (SHL828Q) /CSM/SH/SHL8-B/SHL828Q.Seq.d/ 729 0.0
SHL815 (SHL815Q) /CSM/SH/SHL8-A/SHL815Q.Seq.d/ 729 0.0
SHL770 (SHL770Q) /CSM/SH/SHL7-C/SHL770Q.Seq.d/ 729 0.0
SHL751 (SHL751Q) /CSM/SH/SHL7-C/SHL751Q.Seq.d/ 729 0.0
SHL740 (SHL740Q) /CSM/SH/SHL7-B/SHL740Q.Seq.d/ 729 0.0
SHL708 (SHL708Q) /CSM/SH/SHL7-A/SHL708Q.Seq.d/ 729 0.0
SHL647 (SHL647Q) /CSM/SH/SHL6-B/SHL647Q.Seq.d/ 729 0.0
Homology SHL875 vs DNA
<more DNA info>
Sequences producing significant alignments: (bits) Value N
U25143|U25143.1 Dictyostelium discoideum cAMP-inducible pres... 729 0.0 4
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 ma... 127 5e-25 1
AE014817|AE014817.1 Plasmodium falciparum 3D7 chromosome 14 ... 36 0.012 10
CS468836|CS468836.1 Sequence 27 from Patent EP1748080. 42 0.12 6
CS468835|CS468835.1 Sequence 26 from Patent EP1748080. 42 0.12 6
CS419313|CS419313.1 Sequence 27 from Patent WO2006094836. 42 0.12 6
CS419312|CS419312.1 Sequence 26 from Patent WO2006094836. 42 0.12 6
DT633626|DT633626.1 EST1148557 Normalized pine embryo librar... 48 0.41 1
DR686823|DR686823.1 EST1076901 Normalized pine embryo librar... 48 0.41 1
BQ699661|BQ699661.1 NXRV125_B09_F NXRV (Nsf Xylem Root wood ... 48 0.41 1
Homology SHL875 vs Protein
<more Protein info>
Sequences producing significant alignments: (bits) Value
(P54682) RecName: Full=cAMP-inducible prespore protein D7; Flags... 282 1e-74
AJ969441_1(AJ969441|pid:none) Trypanosoma cruzi garp gene for gl... 38 0.83
(Q55GK0) RecName: Full=GATA zinc finger domain-containing protei... 37 1.1
(Q8IIG1) RecName: Full=Uncharacterized protein PF11_0213; &AE01... 37 1.4
CP001078_829(CP001078|pid:none) Clostridium botulinum E3 str. Al... 37 1.4
CP002114_2345(CP002114|pid:none) Staphylococcus aureus subsp. au... 37 1.4
EU579525_1(EU579525|pid:none) Plasmodium yoelii sporozoite and l... 36 2.4
CP001690_2288(CP001690|pid:none) Halogeometricum borinquense DSM... 36 3.2
FM864216_586(FM864216|pid:none) Mycoplasma conjunctivae HRC/581T... 36 3.2
AP007164_721(AP007164|pid:none) Aspergillus oryzae RIB40 DNA, SC... 36 3.2
Homology SHL875 vs Genome
<more Genome info>
<List of Series> <Series: SHL8-D> <Clone: SHL875> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>
Dictyostelium discoideum cDNA Project Home