Homology SHL704 vs DNA
Query= SHL704 (SHL704Q) /CSM/SH/SHL7-A/SHL704Q.Seq.d/
(968 letters)
Database: ddbjhum1.seq; ddbjhum2.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; /db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq;
/db/DDBJNEW.DATA/b/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
/db/DDBJNEW.DATA/b/new_ddbjvrt.seq; ddbjinv1.seq; ddbjinv2.seq;
/db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; /db/DDBJNEW.DATA/b/new_ddbjpln.seq;
ddbjbct1.seq; ddbjbct2.seq; ddbjbct3.seq;
/db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq;
/db/DDBJNEW.DATA/b/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq; ddbjgss1.seq;
ddbjgss10.seq; ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq;
ddbjgss14.seq; ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq;
ddbjgss18.seq; ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq;
ddbjgss21.seq; ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq;
ddbjgss25.seq; ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq;
ddbjgss29.seq; ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq;
ddbjgss4.seq; ddbjgss5.seq; ddbjgss6.seq; ddbjgss7.seq; ddbjgss8.seq;
ddbjgss9.seq; /db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss2.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg2.seq; ddbjhtg3.seq; ddbjhtg4.seq; ddbjhtg5.seq;
ddbjhtg6.seq; ddbjhtg7.seq; ddbjhtg8.seq; ddbjhtg9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhtg1.seq;
/db/DDBJNEW.DATA/b/new_ddbjhtg2.seq; ddbjpat1.seq; ddbjpat2.seq;
ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq;
/db/DDBJNEW.DATA/b/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; /db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq; est_crei1.seq;
est_cint1.seq; est_drer1.seq; /db/DDBJNEW.DATA/b/new_est_drer1.seq;
est_dmel1.seq; est_ggal1.seq; /db/DDBJNEW.DATA/b/new_est_ggal1.seq;
est_gmax1.seq; /db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq;
est_hum2.seq; est_hum3.seq; est_hum4.seq; est_hum5.seq; est_hum6.seq;
/db/DDBJNEW.DATA/b/new_est_hum1.seq; est_hvul1.seq;
/db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/b/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/b/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/b/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest10.seq;
est_rest11.seq; est_rest2.seq; est_rest3.seq; est_rest4.seq;
est_rest5.seq; est_rest6.seq; est_rest7.seq; est_rest8.seq;
est_rest9.seq; /db/DDBJNEW.DATA/b/new_est_rest1.seq
64,045,775 sequences; 69,202,372,393 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AV408295|AV408295.1 Lotus japonicus cDNA clone:MWL038g09_r, ... 36 0.006 2
AG279695|AG279695.1 Mus musculus molossinus DNA, clone:MSMg0... 38 0.022 2
AZ540454|AZ540454.1 ENTDF66TF Entamoeba histolytica Sheared ... 40 0.022 2
AZ529180|AZ529180.1 ENTCE59TR Entamoeba histolytica Sheared ... 40 0.022 2
AZ669217|AZ669217.1 ENTFV38TR Entamoeba histolytica Sheared ... 40 0.022 2
AL459772|AL459772.1 T. brucei sheared genomic DNA clone 76h1... 50 0.11 1
AC159432|AC159432.1 Trypanosoma brucei chromosome 5 clone RP... 50 0.11 1
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 ma... 38 0.23 6
AW602525|AW602525.1 RC5-BT0562-200100-031-D05 BT0562 Homo sa... 36 0.33 2
AW602513|AW602513.1 RC5-BT0562-180100-031-D05 BT0562 Homo sa... 36 0.33 2
AW602527|AW602527.1 RC5-BT0562-200100-031-E06 BT0562 Homo sa... 36 0.33 2
AW602516|AW602516.1 RC5-BT0562-180100-031-E06 BT0562 Homo sa... 36 0.33 2
AW602511|AW602511.1 RC5-BT0562-140100-031-C06 BT0562 Homo sa... 36 0.33 2
DY364470|DY364470.1 ZO__Ee0002N16.f ZO__Ee Zingiber officina... 48 0.43 1
H63840|H63840.1 yu47a10.s1 Soares fetal liver spleen 1NFLS H... 48 0.43 1
AC024315|AC024315.3 Homo sapiens clone RP11-26N3, WORKING DR... 48 0.43 1
AL391001|AL391001.12 Human DNA sequence from clone RP11-477H... 48 0.43 1
AC007956|AC007956.5 Homo sapiens chromosome 14 clones CTD-32... 36 0.88 2
AC132595|AC132595.3 Mus musculus BAC clone RP24-229G7 from c... 40 0.88 2
CS080912|CS080912.1 Sequence 115 from Patent WO2005040414. 36 0.88 2
CS063131|CS063131.1 Sequence 115 from Patent EP1522594. 36 0.88 2
AL832365|AL832365.1 Homo sapiens mRNA; cDNA DKFZp451P176 (fr... 36 1.1 2
AK090435|AK090435.1 Homo sapiens mRNA for FLJ00353 protein. 36 1.1 2
DD388316|DD388316.1 COMPOSITIONS AND METHODS FOR THE DIAGNOS... 36 1.1 2
CR761606|CR761606.2 Xenopus tropicalis finished cDNA, clone ... 36 1.1 2
DD366887|DD366887.1 Genes which regulate angiogenesis. 36 1.1 2
AX925944|AX925944.1 Sequence 23 from Patent WO03083117. 36 1.1 2
AX060175|AX060175.1 Sequence 21 from Patent WO0078952. 36 1.1 2
DD366886|DD366886.1 Genes which regulate angiogenesis. 36 1.1 2
AX925942|AX925942.1 Sequence 21 from Patent WO03083117. 36 1.1 2
BC007792|BC007792.1 Homo sapiens YLP motif containing 1, mRN... 36 1.1 2
AG288523|AG288523.1 Mus musculus molossinus DNA, clone:MSMg0... 34 1.1 2
AR204104|AR204104.1 Sequence 2 from patent US 6365722. 36 1.1 2
BC023570|BC023570.2 Homo sapiens YLP motif containing 1, mRN... 36 1.2 2
BE795132|BE795132.1 601592665F1 NIH_MGC_7 Homo sapiens cDNA ... 36 1.2 2
BG164559|BG164559.1 602342110F1 NIH_MGC_89 Homo sapiens cDNA... 36 1.2 2
BG289918|BG289918.1 602381333F1 NIH_MGC_93 Homo sapiens cDNA... 36 1.2 2
BQ424807|BQ424807.1 AGENCOURT_7902752 NIH_MGC_72 Homo sapien... 36 1.2 2
BG431377|BG431377.1 602500003F1 NIH_MGC_75 Homo sapiens cDNA... 36 1.2 2
AL043233|AL043233.1 Homo sapiens mRNA; EST DKFZp434J1423_r1 ... 36 1.2 2
BG675850|BG675850.1 602621889F1 NCI_CGAP_Skn4 Homo sapiens c... 36 1.2 2
BE743026|BE743026.1 601574654F1 NIH_MGC_9 Homo sapiens cDNA ... 36 1.2 2
BE746216|BE746216.1 601578685F1 NIH_MGC_9 Homo sapiens cDNA ... 36 1.2 2
BI829562|BI829562.1 603080394F1 NIH_MGC_119 Homo sapiens cDN... 36 1.2 2
BF573676|BF573676.1 602077265F2 NIH_MGC_62 Homo sapiens cDNA... 36 1.2 2
BU430228|BU430228.1 UI-HF-BN0-aev-h-06-0-UI.r1 NIH_MGC_50 Ho... 36 1.2 2
CB153087|CB153087.1 K-EST0210419 B1T694954 Homo sapiens cDNA... 36 1.2 2
CB116754|CB116754.1 K-EST0161636 L10ChoCK0 Homo sapiens cDNA... 36 1.2 2
CR746625|CR746625.1 RZPD Homo sapiens cDNA clone IMAGp998D09... 36 1.2 2
AW377966|AW377966.1 MR0-HT0208-211299-104-a02 HT0208 Homo sa... 36 1.2 2
BF349715|BF349715.1 MR0-HT0208-131299-102-c07 HT0208 Homo sa... 36 1.2 2
BD436801|BD436801.1 Human Genes and Gene Expression Products. 36 1.2 2
AX247334|AX247334.1 Sequence 2264 from Patent WO0166753. 36 1.2 2
BD214267|BD214267.1 Novel human genes and gene expression pr... 36 1.2 2
AR767861|AR767861.1 Sequence 2409 from patent US 6964868. 36 1.2 2
R58811|R58811.1 G5168 Fetal heart Homo sapiens cDNA clone G5... 36 1.2 2
DX405755|DX405755.1 GR_Sa0003I23.b1 Gossypium raimondii WGS ... 36 1.5 2
AC010407|AC010407.4 Homo sapiens chromosome 5 clone CTD-2156... 46 1.7 1
DE245391|DE245391.1 Trifolium pratense DNA, clone:RC0432f.ab1. 46 1.7 1
CW271531|CW271531.1 104_743_11403047_116_35338_084 Sorghum m... 46 1.7 1
CW068618|CW068618.1 104_317_10525216_1_30096 Sorghum methyla... 46 1.7 1
CW068522|CW068522.1 104_317_10525166_1_30110 Sorghum methyla... 46 1.7 1
CL108045|CL108045.1 ISB1-49D10_Sp6.1 ISB1 Xenopus tropicalis... 46 1.7 1
CC204282|CC204282.1 CH261-17J24_Sp6.1 CH261 Gallus gallus ge... 46 1.7 1
U61948|U61948.2 Caenorhabditis elegans cosmid C46A5, complet... 46 1.7 1
DQ131648|DQ131648.1 Sarcoptes scabiei paramyosin mRNA, parti... 46 1.7 1
AF462195|AF462195.1 Sarcoptes scabiei type hominis paramyosi... 46 1.7 1
AF317670|AF317670.1 Sarcoptes scabiei paramyosin mRNA, compl... 46 1.7 1
AC022449|AC022449.5 Homo sapiens chromosome 5 clone RP11-93O... 46 1.7 1
AC021076|AC021076.5 Homo sapiens chromosome 5 clone CTB-166J... 46 1.7 1
U09185|U09185.1 Buchnera aphidicola Soh B protease (soh B) g... 38 2.4 3
AC097309|AC097309.6 Rattus norvegicus clone CH230-97M10, WOR... 32 3.2 2
AC156219|AC156219.2 Bos taurus clone CH240-47O5, *** SEQUENC... 34 3.2 2
AC188592|AC188592.3 Pan troglodytes chromosome 7 clone CH251... 34 3.2 2
AC146204|AC146204.3 Pan troglodytes BAC clone RP43-25M3 from... 34 3.2 2
BX842566|BX842566.4 Mouse DNA sequence from clone RP23-174M7... 32 3.2 2
AY126275|AY126275.1 Mamestra configurata nucleopolyhedroviru... 32 3.3 2
AC023101|AC023101.3 Homo sapiens chromosome 7 clone RP11-348... 34 3.3 2
AC184313|AC184313.1 Strongylocentrotus purpuratus clone R3-3... 32 3.3 2
AL049649|AL049649.7 Human DNA sequence from clone RP4-734C18... 32 3.3 2
AC069368|AC069368.14 Homo sapiens chromosome 15, clone CTD-2... 32 3.3 2
AC007029|AC007029.3 Homo sapiens clone RP5-855F16, complete ... 34 3.4 2
AC103691|AC103691.2 Homo sapiens chromosome 15, clone RP11-9... 32 3.4 2
AL929107|AL929107.14 Mouse DNA sequence from clone RP23-6C6 ... 32 3.5 2
AC170714|AC170714.2 Atelerix albiventris clone LB4-323J17, W... 40 3.7 4
CT728718|CT728718.2 Danio rerio EST, clone ZF_mu_292n18 3'. 36 4.0 2
CT597405|CT597405.2 Danio rerio EST, clone ZF_mu_35p10 3'. 36 4.1 2
AG280418|AG280418.1 Mus musculus molossinus DNA, clone:MSMg0... 32 4.2 2
BF583260|BF583260.1 602101723F1 NCI_CGAP_Co24 Mus musculus c... 32 4.3 2
BQ717312|BQ717312.1 AGENCOURT_8291429 Lupski_sympathetic_tru... 32 4.3 2
DU058903|DU058903.1 90823 Tomato HindIII BAC Library Solanum... 32 4.3 2
BQ918522|BQ918522.1 AGENCOURT_8821136 Lupski_sciatic_nerve H... 32 4.3 2
DN960180|DN960180.1 USDA-FP/ARO_16010 Star Ruby grapefruit h... 34 4.3 2
EB047799|EB047799.1 OpilSEQ13122 Ophiostoma piliferum pBlues... 32 4.3 2
CU103411|CU103411.1 Equus caballus GSS, BAC clone CH241-209F... 34 4.4 2
CA306321|CA306321.1 UI-H-FT1-bhv-f-12-0-UI.s1 NCI_CGAP_FT1 H... 32 4.4 2
EC817647|EC817647.1 SME00002494 esmbsro2 Sawyeria marylanden... 32 4.8 2
AC148135|AC148135.1 Atelerix albiventris clone LB4-506N2, WO... 42 5.5 4
CT728717|CT728717.2 Danio rerio EST, clone ZF_mu_292n18 5'. 36 5.5 2
CV848557|CV848557.1 ID0AEE5DG08RM1 ID0AEE Acyrthosiphon pisu... 44 6.8 1
>AV408295|AV408295.1 Lotus japonicus cDNA clone:MWL038g09_r, 5' end.
Length = 426
Score = 36.2 bits (18), Expect(2) = 0.006
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 392 cagaggaagaaaagaaac 409
||||||||||||||||||
Sbjct: 214 cagaggaagaaaagaaac 231
Score = 36.2 bits (18), Expect(2) = 0.006
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 422 ttgaagaagaaaagaaac 439
||||||||||||||||||
Sbjct: 262 ttgaagaagaaaagaaac 279
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 64045775
Number of Hits to DB: 621,526,825
Number of extensions: 42098196
Number of successful extensions: 3847975
Number of sequences better than 10.0: 117
Length of query: 968
Length of database: 69,202,372,393
Length adjustment: 24
Effective length of query: 944
Effective length of database: 67,665,273,793
Effective search space: 63876018460592
Effective search space used: 63876018460592
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
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