Dictyostelium discoideum cDNA Clone SHL702

Sequence SHL702

AACAACCTCA ACAACAACAA CAAAAACAAA CATCAAATCA ATCAGAAGAT
CCTGCTACTC AATTATCTTC ATTGAAATTT GAAAGTGATA AAGAAAAAGA
ACAAGCTTTA CTTTGGGCTT TCTTGGCAAG CTATCTTCCA GAGGATAAGG
GTTCACTTCA AAAAGAATTT GTTAAACATG TTGAATATAC TTTGGCTCAA
ACCAAGAGTG AATGTACTGA TTTCTCAAGT TTCCAAGCAC TTTCATATTG
TACCAGGGAT AGACTCATTG AGAGATGGAA GGATACCAAA CTTTTCTTTA
AACAAAAGAG TGTTAAACAA GTAAACTATA TGTCTTTGGA ATTTTTATTG
GGTAGATCTC TTCAAAACTC TCTTAGTGCA TTGGGCTTAG TTGGTAAATA
TTCTGATGCT TTAATGGACT TGGGTTTCAA ACTTGAAGAT CTCTATGATG
AAGAAAGAGA TGCAGGTTTA GGTAATGGTG GTCTTGGTCG TTTAGCTGCA
TGTTTTATGG ATTCATTAGC AACTTGTAAT TTTCCAGGAT ATGGCTATGG
TTTACGTTAT AAATTTGGTA TGTTTTATCA AACATTAGTT GATGGTGAAC
AAGTTGAATT ---------- TACTGAAGCA TCTGGTACAA GTAATATGAA
ATTCAGTATG AATGGTGGTC TTATCATTGG TACTTTGGAT GGTGCAAACA
TTGAAATTCG TGATGCCATT GGTCATGAAA ATATGTACAT CTTTGGTGCT
CGTTCTGAAG AGGTCAACAA AGTAAAGAAA ATTATTCATG ATGGAAAATT
CACACCAGAC ACTAGATGGG CTCGTGTTTT AACCGCTATT AAAGAAGATA
CTTTTGGTCC ACATGAACAA TTCCAAGATA TTATCAACTC TGTTAGTGGT
GGCAATGATC ATTACATTCT TAGTTATGAT TTTGGTTCTT ACTTGGATAT
TCAAAATTCA ATTGATCAAG ATTTCAAAGA TAGAGCTAAA TGGGCTAAAA
AATCAATTAT GGCTTCAGTT TGTTGTGGTA AATTCAGTTC AGATAGAACC
ATTAAAGAGT ATGCTCAACA AATTTGGGGT ATTGAAGAAT GGAAGAGACC
AGGTCCAGTT CCAGTTTCAA ATGAAGAAGC TCGTTCTTTA TTAGTTCCAC
CACCATCTGG TTCACCAAAT GATATCAATG CTATCTCAAT TGAAAGATTA
TCACCTTTAA CTTTTGTTAA ACAAACTTCT GCTTCTCCAT TATCTGTTAT
CTCTGGTGGT GATAAAACCA ACAACACTTT AAAACCAAAA CAAACTACAA
AAGGTTTTAA TATTGGGGTC AACCAGGTAA TCCAACAAAT TAATTAAATA
ATAATAATAA AAAAGAAAAA AA

Translated Amino Acid Sequence SHL702

QPQQQQQKQTSNQSEDPATQLSSLKFESDKEKEQALLWAFLASYLPEDKGSLQKEFVKHV
EYTLAQTKSECTDFSSFQALSYCTRDRLIERWKDTKLFFKQKSVKQVNYMSLEFLLGRSL
QNSLSALGLVGKYSDALMDLGFKLEDLYDEERDAGLGNGGLGRLAACFMDSLATCNFPGY
GYGLRYKFGMFYQTLVDGEQVE---

---TEASGTSNMKFSMNGGLIIGTLDGANIEIRDAIGHENMYIFGARSEEVNKVKKIIHD
GKFTPDTRWARVLTAIKEDTFGPHEQFQDIINSVSGGNDHYILSYDFGSYLDIQNSIDQD
FKDRAKWAKKSIMASVCCGKFSSDRTIKEYAQQIWGIEEWKRPGPVPVSNEEARSLLVPP
PSGSPNDINAISIERLSPLTFVKQTSASPLSVISGGDKTNNTLKPKQTTKGFNIGVNQVI
QQIN*iiiikkkk

Homology SHL702 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SHL702 (SHL702Q) /CSM/SH/SHL7-A/SHL702Q.Seq.d/                       2569   0.0
AHF204 (AHF204Q) /CSM/AH/AHF2-A/AHF204Q.Seq.d/                       1463   0.0
AHE134 (AHE134Q) /CSM/AH/AHE1-B/AHE134Q.Seq.d/                       1463   0.0
SHA771 (SHA771Q) /CSM/SH/SHA7-C/SHA771Q.Seq.d/                       1455   0.0
CHS249 (CHS249Q) /CSM/CH/CHS2-C/CHS249Q.Seq.d/                       1455   0.0
CHL678 (CHL678Q) /CSM/CH/CHL6-D/CHL678Q.Seq.d/                       1455   0.0
CHG213 (CHG213Q) /CSM/CH/CHG2-A/CHG213Q.Seq.d/                       1455   0.0
CHF191 (CHF191Q) /CSM/CH/CHF1-D/CHF191Q.Seq.d/                       1455   0.0
AHO116 (AHO116Q) /CSM/AH/AHO1-A/AHO116Q.Seq.d/                       1455   0.0
AHM665 (AHM665Q) /CSM/AH/AHM6-C/AHM665Q.Seq.d/                       1455   0.0

Homology SHL702 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


M77492|M77492.1 Dictyostelium discoideum glycoprotein phosph...  1380   0.0    2
X62142|X62142.1 D. discoideum glpV gene for glycogen phospho...    94   1e-36  6
AL409683|AL409683.1 T3 end of clone XAV0AA001D03 of library ...    74   2e-14  2
CP000021|CP000021.1 Vibrio fischeri ES114 chromosome II, com...    84   5e-12  3
CR378679|CR378679.1 Photobacterium profundum SS9 chromosome ...    84   1e-11  1
BX538351|BX538351.1 Cryptosporidium parvum chromosome 6, com...    50   3e-09  2
CF721944|CF721944.1 CCAGX23TR C.neoformans strain JEC21 Cryp...    68   7e-07  1
CF719572|CF719572.1 CCABL22TR C.neoformans strain JEC21 Cryp...    68   7e-07  1
CF718941|CF718941.1 CCACV19TR C.neoformans strain JEC21 Cryp...    68   7e-07  1
CF718033|CF718033.1 CCAGE88TR C.neoformans strain JEC21 Cryp...    68   7e-07  1

Homology SHL702 vs Protein

Sequences producing significant alignments:                      (bits) Value


CR954211_102(CR954211|pid:none) Ostreococcus tauri strain OTTH05...   174   1e-41
CP000591_95(CP000591|pid:none) Ostreococcus lucimarinus CCE9901 ...   174   1e-41
(Q00766) RecName: Full=Glycogen phosphorylase 1;          Short=...   173   2e-41
CP001577_330(CP001577|pid:none) Micromonas sp. RCC299 chromosome...   166   4e-39
EU165056_1(EU165056|pid:none) Cyanophora paradoxa starch phospho...   163   2e-38
AY098895_1(AY098895|pid:none) Citrus hybrid cultivar starch phos...   163   2e-38
BX538351_58(BX538351|pid:none) Cryptosporidium parvum chromosome...   162   6e-38
CP001330_331(CP001330|pid:none) Micromonas sp. RCC299 chromosome...   162   6e-38
DQ279077_1(DQ279077|pid:none) Chlamydomonas reinhardtii PhoB (PH...   161   7e-38
CR954204_212(CR954204|pid:none) Ostreococcus tauri strain OTTH05...   159   4e-37

Homology SHL702 vs Genome