Dictyostelium discoideum cDNA Clone SHL672

Sequence SHL672

ATTAATAAAT AATAATTAAA ATTTGCATAT ATAAAAGAAA TAAAAATTTT
TTATTTTTTG TAAACATATT ATTTTCTGTA AATAAATCAT ATAATTTTTC
AACATACATA TATATATATA TATTTTTAAA ATAAAATAAA ATAAAAATGT
CATTTAATCC AGAAGAATTT ACTGATAAAA CAAATACAAT TTTGTTAAGA
ACTCAAGAAT TGGCAAGAGA AAAATCAAAT GTACAATTAG CACCAATACA
TTTGGCTGTT ACATTATTAA ATGATGAAGA TAATTTAGCA AAATCTATAT
TTGAAAAAGC TGGTGGAGAT GTACCAAAAA TTGATGCTGG TTTTAAAAGA
TTATTAGCCA AACAACCTGT TCAAAATCCA GTACCACCTG AAATTTCTCC
AAATTCATTA TTTTTACAAG TTTTAAGATC AGCAGCACGT CATCAAAAGA
ATAATGGTGA TTCTCATTTA GCAGTTGACC ATTTAATATT GGGATTATTG
GATGATAGAG ATATATTATC AGTATTGGGA GATGCTGGTG CAACCAAA--
--------AA AAGCATTGGC ATGGNAATTG TTTGATGATG AATCTCATAT
GGTTAGAATT GATATGAGTG AATATATGGA ACAACATTCG GTTTCTCGTT
TAATTGGTGC TCCACCAGGT TATGTAGGTT ATGATCAAGG TGGTCAATTA
ACTGAAGCCG TCAGAAGAAG ACCATACAGT GTAGTATTGT TTGATGAAGT
TGAAAAAGCT CATCAACAAG TTTGGAATGT TCTCTTACAA GTATTGGATG
AAGGTCGTCT TACCGATGGT CAAGGTAGAA CCGTAGATTT CTCAAATGTT
GTTATCATTA TGACCTCAAA TTTAGGTAGT CAATACATCC TTGGTGAACA
AGCAAACAAA GAAGGTGGTA ACAACTCTTT ATCACAAGCT TGTAAAGATA
AAGTCATTGA TGAAGTTAGA AAACATTTCC GTCCAGAGTT TTTAAATCGT
CTCGATGATA TAATTGTCTT TACTCCATTG AGTAAAGAAA ACCTTCATAG
TATTATTACT CTTCAATTAA GATCCGTCGA AAAGAGATTA GAAGATCAAA
ATATGTCTTT AAAGATTTCA AACGATGCTT TAGATTCAAT TATCAATGCT
GCATATGATC CAATCTTTGG TGGTAGACCA TTGAAACGTT ACATTGAAAA
GAATATTGTC ACTGAACTTA GTAAACTCAT CCTTGGTGGT AAATTAAAAG
AAAATCAAGG TGTTGTTGTC AATGAAAAAG ATCATCATCT CAACTTTGAT
ATTATAGATT TAAAACAACA ACAACAACGT CCAGCTTCTC CAACCAAAAA
ACAAAAAACT A

Translated Amino Acid Sequence SHL672

**iiikiciykrnknflffvnilfsvnksynfstyiyiyiflk*NKIKMSFNPEEFTDKT
NTILLRTQELAREKSNVQLAPIHLAVTLLNDEDNLAKSIFEKAGGDVPKIDAGFKRLLAK
QPVQNPVPPEISPNSLFLQVLRSAARHQKNNGDSHLAVDHLILGLLDDRDILSVLGDAGA
TK---

---KALAWXLFDDESHMVRIDMSEYMEQHSVSRLIGAPPGYVGYDQGGQLTEAVRRRPYS
VVLFDEVEKAHQQVWNVLLQVLDEGRLTDGQGRTVDFSNVVIIMTSNLGSQYILGEQANK
EGGNNSLSQACKDKVIDEVRKHFRPEFLNRLDDIIVFTPLSKENLHSIITLQLRSVEKRL
EDQNMSLKISNDALDSIINAAYDPIFGGRPLKRYIEKNIVTELSKLILGGKLKENQGVVV
NEKDHHLNFDIIDLKQQQQRPASPTKKQKT

Homology SHL672 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SHL672 (SHL672Q) /CSM/SH/SHL6-C/SHL672Q.Seq.d/                       2309   0.0
SHJ825 (SHJ825Q) /CSM/SH/SHJ8-B/SHJ825Q.Seq.d/                       1546   0.0
CHR423 (CHR423Q) /CSM/CH/CHR4-A/CHR423Q.Seq.d/                       1546   0.0
CHS196 (CHS196Q) /CSM/CH/CHS1-D/CHS196Q.Seq.d/                       1540   0.0
CHH470 (CHH470Q) /CSM/CH/CHH4-C/CHH470Q.Seq.d/                       1538   0.0
CHL860 (CHL860Q) /CSM/CH/CHL8-C/CHL860Q.Seq.d/                       1532   0.0
SHG564 (SHG564Q) /CSM/SH/SHG5-C/SHG564Q.Seq.d/                       1530   0.0
SFE610 (SFE610Q) /CSM/SF/SFE6-A/SFE610Q.Seq.d/                       1530   0.0
CHR708 (CHR708Q) /CSM/CH/CHR7-A/CHR708Q.Seq.d/                       1530   0.0
CHL309 (CHL309Q) /CSM/CH/CHL3-A/CHL309Q.Seq.d/                       1530   0.0

Homology SHL672 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


CP000029|CP000029.1 Staphylococcus epidermidis RP62A, comple...   129   5e-34  3
AE015929|AE015929.1 Staphylococcus epidermidis ATCC 12228, c...   129   5e-34  3
AX145048|AX145048.1 Sequence 3770 from Patent WO0134809.          129   6e-34  3
AR485684|AR485684.1 Sequence 3770 from patent US 6703492.         129   6e-34  3
AF269730|AF269730.1 Staphylococcus epidermidis strain SR1 cl...   129   6e-34  3
AR888347|AR888347.1 Sequence 2008 from patent US 7060458.         129   6e-34  3
AX143829|AX143829.1 Sequence 2551 from Patent WO0134809.          129   6e-34  3
AR484857|AR484857.1 Sequence 2551 from patent US 6703492.         129   6e-34  3
AB239684|AB239684.1 Tetragenococcus halophilus gene for ClpB...   105   2e-24  2
CP000233|CP000233.1 Lactobacillus salivarius subsp. salivari...    56   5e-20  3

Homology SHL672 vs Protein

Sequences producing significant alignments:                      (bits) Value


HC750102_1(HC750102|pid:none) Sequence 7193 from Patent WO201004...   295   4e-78
AY764155_1(AY764155|pid:none) Vitis vinifera heat shock protein ...   295   4e-78
GQ342709_1(GQ342709|pid:none) Vitis labrusca x Vitis vinifera he...   295   4e-78
CP001107_2482(CP001107|pid:none) Eubacterium rectale ATCC 33656,...   294   9e-78
FP929043_719(FP929043|pid:none) Eubacterium rectale M104/1 draft...   294   9e-78
AJ970534_1(AJ970534|pid:none) Triticum turgidum subsp. durum par...   293   2e-77
HC750078_1(HC750078|pid:none) Sequence 7169 from Patent WO201004...   292   3e-77
AJ970533_1(AJ970533|pid:none) Triticum turgidum subsp. durum par...   292   3e-77
HC750088_1(HC750088|pid:none) Sequence 7179 from Patent WO201004...   292   3e-77
(Q6F2Y7) RecName: Full=Chaperone protein ClpB1; AltName: Full=AT...   292   3e-77

Homology SHL672 vs Genome