Homology SHL629 vs Protein
Query= SHL629 (SHL629Q) /CSM/SH/SHL6-B/SHL629Q.Seq.d/
(1265 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC117076_23(AC117076|pid:none) Dictyostelium discoideum chromoso... 64 2e-08
AC116963_25(AC116963|pid:none) Dictyostelium discoideum chromoso... 51 2e-04
AC116100_1(AC116100|pid:none) Dictyostelium discoideum chromosom... 47 0.002
CP002480_2124(CP002480|pid:none) Granulicella sp. MP5ACTX9, comp... 47 0.002
CP002345_2101(CP002345|pid:none) Paludibacter propionicigenes WB... 46 0.004
(Q06885) RecName: Full=Glycoprotein gp100; AltName: Full=P29F8; ... 43 0.033
EU643473_4(EU643473|pid:none) Adineta vaga clone Av240_A TPR rep... 43 0.033
AC115598_15(AC115598|pid:none) Dictyostelium discoideum chromoso... 43 0.044
FJ374909_1(FJ374909|pid:none) Dictyostelium discoideum strain QS... 42 0.057
AP012206_5165(AP012206|pid:none) Bradyrhizobium japonicum USDA 6... 40 0.28
FJ374905_1(FJ374905|pid:none) Dictyostelium discoideum strain QS... 40 0.28
CP001323_444(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 40 0.28
FJ374902_1(FJ374902|pid:none) Dictyostelium discoideum strain QS... 40 0.28
CP002735_788(CP002735|pid:none) Delftia sp. Cs1-4, complete geno... 40 0.28
FJ374919_1(FJ374919|pid:none) Dictyostelium discoideum strain QS... 40 0.28
FJ374921_1(FJ374921|pid:none) Dictyostelium discoideum strain QS... 39 0.48
FJ374957_1(FJ374957|pid:none) Dictyostelium discoideum strain QS... 39 0.63
FJ374900_1(FJ374900|pid:none) Dictyostelium discoideum strain QS... 39 0.63
FJ374903_1(FJ374903|pid:none) Dictyostelium discoideum strain QS... 39 0.82
FJ374918_1(FJ374918|pid:none) Dictyostelium discoideum strain QS... 39 0.82
CP000884_5785(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 39 0.82
FJ374895_1(FJ374895|pid:none) Dictyostelium discoideum strain QS... 39 0.82
FJ374893_1(FJ374893|pid:none) Dictyostelium discoideum strain QS... 39 0.82
FJ374912_1(FJ374912|pid:none) Dictyostelium discoideum strain QS... 39 0.82
FJ374955_1(FJ374955|pid:none) Dictyostelium discoideum strain QS... 38 1.1
FJ374959_1(FJ374959|pid:none) Dictyostelium discoideum strain QS... 38 1.1
FJ374954_1(FJ374954|pid:none) Dictyostelium discoideum strain QS... 38 1.1
FJ374967_1(FJ374967|pid:none) Dictyostelium discoideum strain QS... 38 1.1
FJ374960_1(FJ374960|pid:none) Dictyostelium discoideum strain QS... 38 1.1
FJ374962_1(FJ374962|pid:none) Dictyostelium discoideum strain QS... 38 1.1
CP002047_7442(CP002047|pid:none) Streptomyces bingchenggensis BC... 38 1.1
FJ374964_1(FJ374964|pid:none) Dictyostelium discoideum strain QS... 38 1.1
FJ374958_1(FJ374958|pid:none) Dictyostelium discoideum strain QS... 38 1.1
FJ374956_1(FJ374956|pid:none) Dictyostelium discoideum strain QS... 38 1.1
FJ374915_1(FJ374915|pid:none) Dictyostelium discoideum strain QS... 38 1.4
(Q54L75) RecName: Full=Tiger protein E1; AltName: Full=Loose agg... 37 1.8
FJ374970_1(FJ374970|pid:none) Dictyostelium discoideum strain QS... 37 1.8
(Q54T74) RecName: Full=S-cell enriched with leucine-rich repeat-... 37 2.4
AP008955_4972(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 36 5.3
CP000884_5870(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 36 5.3
A31643(S22066;A31643;A26310;A23951;A33463;S01473) cell adhesion ... 35 7.0
(Q55GI8) RecName: Full=Tiger protein O1; AltName: Full=Transmemb... 35 9.1
CP001707_1225(CP001707|pid:none) Kangiella koreensis DSM 16069, ... 35 9.1
AC116982_63(AC116982|pid:none) Dictyostelium discoideum chromoso... 35 9.1
>AC117076_23(AC117076|pid:none) Dictyostelium discoideum chromosome 2
map 3323568-3470138 strain AX4, complete sequence.
Length = 945
Score = 63.9 bits (154), Expect = 2e-08
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 11/134 (8%)
Frame = +2
Query: 659 NKKDTGLKIMVGNHSCDSLTIVDTQ---TLTXSAPPGSGIKNXVSFMVKDAESKLSPP-L 826
N L I +G+ C + +D + ++T PPGSG VS ++ D + +P L
Sbjct: 712 NNNGNHLNIKIGSQICKDIQQLDLKHFTSITCKMPPGSGGDYSVSILINDILVQGNPKGL 771
Query: 827 FLDYSPPTIMSSTSVKQVEGGQVTIYGTNFENTLITVNVGSKSCEXXXVIDSTKLTC--- 997
Y PTI++STSV GG +TI+G+ + + C + DS LTC
Sbjct: 772 TFSYMSPTIINSTSVSPTTGGLITIFGSQLAKPINITIANLQQCIYVNITDSNSLTCYLP 831
Query: 998 ----SISKSTIDPS 1027
S++KS+I+ S
Sbjct: 832 PLSESLNKSSIERS 845
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 2,671,539,745
Number of extensions: 48954032
Number of successful extensions: 99934
Number of sequences better than 10.0: 44
Number of HSP's gapped: 99858
Number of HSP's successfully gapped: 47
Length of query: 421
Length of database: 1,732,582,204
Length adjustment: 135
Effective length of query: 286
Effective length of database: 1,010,438,449
Effective search space: 288985396414
Effective search space used: 288985396414
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home