Homology SHL629 vs DNA
Query= SHL629 (SHL629Q) /CSM/SH/SHL6-B/SHL629Q.Seq.d/
(1265 letters)
Score E
Sequences producing significant alignments: (bits) Value N
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma... 38 0.28 8
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma... 32 1.1 16
AC167674|AC167674.2 Bos taurus clone CH240-196I16, *** SEQUE... 46 2.1 1
AC167580|AC167580.2 Bos taurus clone CH240-203N8, *** SEQUEN... 46 2.1 1
CZ518228|CZ518228.1 GMW2-73G17a.b1 GMW2 Glycine max genomic,... 46 2.1 1
AC188200|AC188200.1 Zea mays chromosome UNKNOWN clone ZMMBBb... 44 2.8 4
DY895079|DY895079.1 CeleSEQ14806 Cunninghamella elegans pBlu... 44 8.1 1
CK295567|CK295567.1 EST758281 Nicotiana benthamiana mixed ti... 44 8.1 1
AC189077|AC189077.1 Zea mays chromosome 9 clone CH201-11M20;... 44 8.1 1
AC126969|AC126969.3 Rattus norvegicus clone CH230-197P4, ***... 44 8.1 1
AC098757|AC098757.9 Rattus norvegicus clone CH230-86J1, *** ... 44 8.1 1
CZ544989|CZ544989.1 SRAA-aad59b06.g1 Strongyloides ratti who... 44 8.1 1
AF481231|AF481231.1 Cucumis sativus PEPCK (Pepck) gene, comp... 44 8.1 1
CT010458|CT010458.8 Mouse DNA sequence from clone RP23-279C9... 44 8.1 1
AC154364|AC154364.2 Mus musculus BAC clone RP24-559G11 from ... 44 8.1 1
AL157817|AL157817.13 Human DNA sequence from clone RP11-457D... 44 8.1 1
AC108253|AC108253.6 Rattus norvegicus clone CH230-114H14, **... 42 8.6 6
>AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map
1005175-1418323 strainAX4, complete sequence.
Length = 413138
Score = 38.2 bits (19), Expect(8) = 0.28
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 134 aacaatatttaatattgtt 152
|||||||||||||||||||
Sbjct: 68562 aacaatatttaatattgtt 68580
Score = 34.2 bits (17), Expect(8) = 0.28
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 505 tattatttggtgaagat 521
|||||||||||||||||
Sbjct: 385397 tattatttggtgaagat 385413
Score = 32.2 bits (16), Expect(8) = 0.28
Identities = 19/20 (95%)
Strand = Plus / Plus
Query: 175 ttaaaggaaaaaagttaata 194
||||||||||||| ||||||
Sbjct: 110739 ttaaaggaaaaaaattaata 110758
Score = 32.2 bits (16), Expect(8) = 0.28
Identities = 19/20 (95%)
Strand = Plus / Plus
Query: 1089 tatttgaatatgataatgaa 1108
|||||||||||||| |||||
Sbjct: 390328 tatttgaatatgatgatgaa 390347
Score = 30.2 bits (15), Expect(8) = 0.28
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 404 tgatattaaagccaa 418
|||||||||||||||
Sbjct: 350550 tgatattaaagccaa 350564
Score = 28.2 bits (14), Expect(8) = 0.28
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 230 aattttgttaactt 243
||||||||||||||
Sbjct: 285949 aattttgttaactt 285962
Score = 28.2 bits (14), Expect(8) = 0.28
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 247 aaaaaatattacca 260
||||||||||||||
Sbjct: 324363 aaaaaatattacca 324376
Score = 26.3 bits (13), Expect(8) = 0.28
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 1232 tcttctaaaattt 1244
|||||||||||||
Sbjct: 402922 tcttctaaaattt 402934
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 58603374
Number of Hits to DB: 784,892,987
Number of extensions: 45796139
Number of successful extensions: 3555844
Number of sequences better than 10.0: 20
Length of query: 1265
Length of database: 63,190,217,120
Length adjustment: 24
Effective length of query: 1241
Effective length of database: 61,783,736,144
Effective search space: 76673616554704
Effective search space used: 76673616554704
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home