Homology SHL629 vs DNA

Query= SHL629 (SHL629Q) /CSM/SH/SHL6-B/SHL629Q.Seq.d/
         (1265 letters)

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma...    38   0.28   8
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma...    32   1.1    16
AC167674|AC167674.2 Bos taurus clone CH240-196I16, *** SEQUE...    46   2.1    1
AC167580|AC167580.2 Bos taurus clone CH240-203N8, *** SEQUEN...    46   2.1    1
CZ518228|CZ518228.1 GMW2-73G17a.b1 GMW2 Glycine max genomic,...    46   2.1    1
AC188200|AC188200.1 Zea mays chromosome UNKNOWN clone ZMMBBb...    44   2.8    4
DY895079|DY895079.1 CeleSEQ14806 Cunninghamella elegans pBlu...    44   8.1    1
CK295567|CK295567.1 EST758281 Nicotiana benthamiana mixed ti...    44   8.1    1
AC189077|AC189077.1 Zea mays chromosome 9 clone CH201-11M20;...    44   8.1    1
AC126969|AC126969.3 Rattus norvegicus clone CH230-197P4, ***...    44   8.1    1
AC098757|AC098757.9 Rattus norvegicus clone CH230-86J1, *** ...    44   8.1    1
CZ544989|CZ544989.1 SRAA-aad59b06.g1 Strongyloides ratti who...    44   8.1    1
AF481231|AF481231.1 Cucumis sativus PEPCK (Pepck) gene, comp...    44   8.1    1
CT010458|CT010458.8 Mouse DNA sequence from clone RP23-279C9...    44   8.1    1
AC154364|AC154364.2 Mus musculus BAC clone RP24-559G11 from ...    44   8.1    1
AL157817|AL157817.13 Human DNA sequence from clone RP11-457D...    44   8.1    1
AC108253|AC108253.6 Rattus norvegicus clone CH230-114H14, **...    42   8.6    6

>AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 map
             1005175-1418323 strainAX4, complete sequence.
          Length = 413138

 Score = 38.2 bits (19), Expect(8) = 0.28
 Identities = 19/19 (100%)
 Strand = Plus / Plus


Query: 134   aacaatatttaatattgtt 152
             |||||||||||||||||||
Sbjct: 68562 aacaatatttaatattgtt 68580

 Score = 34.2 bits (17), Expect(8) = 0.28
 Identities = 17/17 (100%)
 Strand = Plus / Plus


Query: 505    tattatttggtgaagat 521
              |||||||||||||||||
Sbjct: 385397 tattatttggtgaagat 385413

 Score = 32.2 bits (16), Expect(8) = 0.28
 Identities = 19/20 (95%)
 Strand = Plus / Plus


Query: 175    ttaaaggaaaaaagttaata 194
              ||||||||||||| ||||||
Sbjct: 110739 ttaaaggaaaaaaattaata 110758

 Score = 32.2 bits (16), Expect(8) = 0.28
 Identities = 19/20 (95%)
 Strand = Plus / Plus


Query: 1089   tatttgaatatgataatgaa 1108
              |||||||||||||| |||||
Sbjct: 390328 tatttgaatatgatgatgaa 390347

 Score = 30.2 bits (15), Expect(8) = 0.28
 Identities = 15/15 (100%)
 Strand = Plus / Plus


Query: 404    tgatattaaagccaa 418
              |||||||||||||||
Sbjct: 350550 tgatattaaagccaa 350564

 Score = 28.2 bits (14), Expect(8) = 0.28
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 230    aattttgttaactt 243
              ||||||||||||||
Sbjct: 285949 aattttgttaactt 285962

 Score = 28.2 bits (14), Expect(8) = 0.28
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 247    aaaaaatattacca 260
              ||||||||||||||
Sbjct: 324363 aaaaaatattacca 324376

 Score = 26.3 bits (13), Expect(8) = 0.28
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 1232   tcttctaaaattt 1244
              |||||||||||||
Sbjct: 402922 tcttctaaaattt 402934

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 58603374
Number of Hits to DB: 784,892,987
Number of extensions: 45796139
Number of successful extensions: 3555844
Number of sequences better than 10.0: 20
Length of query: 1265
Length of database: 63,190,217,120
Length adjustment: 24
Effective length of query: 1241
Effective length of database: 61,783,736,144
Effective search space: 76673616554704
Effective search space used: 76673616554704
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.




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