Dictyostelium discoideum cDNA Clone SHK290

Sequence SHK290

CTGTTGGCCT ACTGGTAAAT AATAAATTTA CTATCAAATA ACTATTTTTT
CTTTTCTTTC TTTTTAAAGT TTAAATAATA GAAATAATAA AAATTAATAT
TAAAAAAAAG GAACGTTAAA AAAAAAA--- -------CAC CTGCTGTAAA
CTCTCATAAG ATTGTAACTC AAATGGGAAA TGTTGAAAAT AATGAAATTA
CCAATGAACA AGATGCCATT GAACAAGCTC AACATTTACA ACGTATTGAA
AATGGTGAAG ATATCGATGA GTATGAAGCT GCCCAACATG AAGTTGCCTT
TTTAGATGAA AATGAACAAG ATGCTGCTAA ATTACAAAAT GAAATGGACC
AATTAGAACT CTTACTTGAA GAGAATGAAG AAGAACAATT TTCAAATAAA
AATTTACAAC AACTTAATGA GAAAGAAAAT CAACAACAAC AACAAGGACA
ACAACAAGTT CAAGCAACAA ATGTTGAACA ACAAATCGTT GAACAACTTA
AAGTTATCAA AGAATTTCAA AGACAAGATC AACAAAAGAA ACAAAAAATT
CAACAAGAGA ACGATGCTGT CTACTTGAGT GATGTTGAAA AAGCTCAACT
TGAATTGGAT GCTGAATTGG CTAAAAATAA TAAACAAGAG AATCAAGATG
AGAATTTAGT TCAAGAGAAA CAACAATCTC CTGACCAAAT TAAAAATCAA
TTAAAAAATA TTCAACATGA ACAACAAATC CAAGAACAAC AAGATAAATT
AAATCAAGAA AAAAATCAAC AATTATTAGA ACAAGAACAA AATCAAAAAT
AATTTAATCA TTNCTTNCTT TTTAAAAAAC T

Translated Amino Acid Sequence SHK290

llayw*iinllsnnyfffsfflkfk**k**KLILKKRNVKKK---

---PAVNSHKIVTQMGNVENNEITNEQDAIEQAQHLQRIENGEDIDEYEAAQHEVAFLDE
NEQDAAKLQNEMDQLELLLEENEEEQFSNKNLQQLNEKENQQQQQGQQQVQATNVEQQIV
EQLKVIKEFQRQDQQKKQKIQQENDAVYLSDVEKAQLELDAELAKNNKQENQDENLVQEK
QQSPDQIKNQLKNIQHEQQIQEQQDKLNQEKNQQLLEQEQNQK*fnhxxlfkk

Homology SHK290 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SHL773 (SHL773Q) /CSM/SH/SHL7-D/SHL773Q.Seq.d/                        662   0.0
SHL680 (SHL680Q) /CSM/SH/SHL6-D/SHL680Q.Seq.d/                        662   0.0
SHL647 (SHL647Q) /CSM/SH/SHL6-B/SHL647Q.Seq.d/                        662   0.0
SHL304 (SHL304Q) /CSM/SH/SHL3-A/SHL304Q.Seq.d/                        662   0.0
SHL180 (SHL180Q) /CSM/SH/SHL1-D/SHL180Q.Seq.d/                        662   0.0
SHK747 (SHK747Q) /CSM/SH/SHK7-B/SHK747Q.Seq.d/                        662   0.0
SHK735 (SHK735Q) /CSM/SH/SHK7-B/SHK735Q.Seq.d/                        662   0.0
SHK608 (SHK608Q) /CSM/SH/SHK6-A/SHK608Q.Seq.d/                        662   0.0
SHK431 (SHK431Q) /CSM/SH/SHK4-B/SHK431Q.Seq.d/                        662   0.0
SHK290 (SHK290Q) /CSM/SH/SHK2-D/SHK290Q.Seq.d/                        662   0.0

Homology SHK290 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


U25143|U25143.1 Dictyostelium discoideum cAMP-inducible pres...   571   0.0    5
AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 ma...   127   4e-25  8
AC117070|AC117070.2 Dictyostelium discoideum chromosome 2 ma...    34   1e-04  9
AE014832|AE014832.1 Plasmodium falciparum 3D7 chromosome 10 ...    36   0.004  8
AL929355|AL929355.1 Plasmodium falciparum strain 3D7, chromo...    36   0.012  11
AX344618|AX344618.1 Sequence 43 from Patent WO0200927.             42   0.014  4
BH133394|BH133394.1 ENTNI62TF Entamoeba histolytica Sheared ...    38   0.019  2
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma...    40   0.023  13
BX842644|BX842644.1 Mycoplasma mycoides subsp. mycoides SC g...    40   0.031  14
AE013218|AE013218.1 Buchnera aphidicola str. Sg (Schizaphis ...    40   0.056  14

Homology SHK290 vs Protein

Sequences producing significant alignments:                      (bits) Value


(P54682) RecName: Full=cAMP-inducible prespore protein D7; Flags...   228   2e-58
AF314648_2(AF314648|pid:none) Plasmodium vivax CG9 (cg9) gene, c...    35   3.6
(Q54F33) RecName: Full=Uncharacterized protein DDB_G0291143;           35   6.2
CP002629_2795(CP002629|pid:none) Desulfobacca acetoxidans DSM 11...    35   6.2

Homology SHK290 vs Genome