Dictyostelium discoideum cDNA Clone SHJ893

Sequence SHJ893

CTGTTGGCCT ACTGGTCCTA CAGTAATGAT TCTTATTTTG TAATTGATGG
TCAAGGTTTT GATGACAAAT CAGTTTATCC AAATGAAAGA GTTTATCGTG
ACGCTTTTGG AAATCCACAT AATTTCCACT TTTGTTTACA AGCTCATACC
GAATTTCAAT ATAAAACTGG TGATGTTTTT AATTTTGCAG GTGATGATGA
TGTTTGGGTA TTTATTAATA ATATTTTGGT TGTGGATTTG GGAGGTATTC
ATACAATTGC AAGTGCAAGT GTTAACTTGG ATTTATTGGG TTTAACACCT
GGACAAAATT ATCCATTTGA TTTCTTTTAT TGTGAACGTC ACACTGTAGA
ATCTCATATA AGAATTGAAA CATCTTTGGC ATTCAAGTGT CCTCGATATG
ATGAATGTGG TGTCTGTGAA GGTGATGGTA CTTCTTGTTG TACTCCAAAT
AATTGTGATA ATAATCCAAT TTATAGAACC AACTGTATAA CAGCAAAATG
TTCAAATAAT GTTTGCGTTA CTTCAGCACC ATATTGCAGT TCAACCGAAC
CATGTACAGT TGGTCTTTGT ACACCAGGTG TTGGTTGTTC AGTTGTTCCA
AAAAATTGTG TAAATGAAAA TCATTGTACC CAAGATTCAT GTAATTCAAC
TATAAATGCT TGCCAACATG ATCC------ ----AGATGA TGCATGTAAT
TTACAAGTAT GTTCTGAAAC TGGAGATAGT TGTCTTACAA TGGTTTTAAA
TTGTGATGAT AATAACGATT GTACTGAAGA TAAGTGTTTA AATACTGGTA
TTTGTCAAAA TAATCCAATT GACGGTTGTG TTACACCATC ACCAGTTTCA
ATTGGTGGAA CTATCCCTCC AACCACTACT GGTGTATCAC AAGTTGAGTG
TGATTGTTGT CCAATTGGTC AAAAATGTTT ATTAGTCAAT GGTCATGAAA
TTTGTATTAA ACCAGCAACC ACTGGTGGTA TTCCAGAATT AACTACTGGT
TGTGCTGGTA CAACAACTGG CAGGGCTACA GGTCATTACA CAGAATCAGG
TACAGGTAAT CCACATTTAT GTGATAGATA TCATTGTAAA AGAGGAATGG
AATGTCATGT TGTTAATGGT GTTCCAGAAT GTTTACCATC AAACTACAAA
TGTTTAGATT GTTTAGATCT TCATTGTGAG AGACAAGGTG ATTTCACCTG
TTTTATGGTT AAAAATCCAA ATTTCATTTC TAGTAAACAT AGTTGTTATG
GTGAATCATG TTGTAAATTC ACACCAGTTT GCAAACCAAA AGGACACTCA
CTTTAAAAAA AACTAAAATT AATATATTAT TTCTTTTCTT TTTATTATAT
ATTTTTATTA AAATTTTATA ACCAAGTCAA CTAATTTCAA TTTAATATTA
CAATATAAAC ATTAAGTTTA TTGTAAAATT TAATAATAAA TAAAAAAACA
AC

Translated Amino Acid Sequence SHJ893

LLAYWSYSNDSYFVIDGQGFDDKSVYPNERVYRDAFGNPHNFHFCLQAHTEFQYKTGDVF
NFAGDDDVWVFINNILVVDLGGIHTIASASVNLDLLGLTPGQNYPFDFFYCERHTVESHI
RIETSLAFKCPRYDECGVCEGDGTSCCTPNNCDNNPIYRTNCITAKCSNNVCVTSAPYCS
STEPCTVGLCTPGVGCSVVPKNCVNENHCTQDSCNSTINACQHD---

---DDACNLQVCSETGDSCLTMVLNCDDNNDCTEDKCLNTGICQNNPIDGCVTPSPVSIG
GTIPPTTTGVSQVECDCCPIGQKCLLVNGHEICIKPATTGGIPELTTGCAGTTTGRATGH
YTESGTGNPHLCDRYHCKRGMECHVVNGVPECLPSNYKCLDCLDLHCERQGDFTCFMVKN
PNFISSKHSCYGESCCKFTPVCKPKGHSL*kklkliyyffsfyyifllkfynqvn*fqfn
iti*tlsll*nliinkkt

Homology SHJ893 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SHJ893 (SHJ893Q) /CSM/SH/SHJ8-D/SHJ893Q.Seq.d/                       2526   0.0
CHS158 (CHS158Q) /CSM/CH/CHS1-C/CHS158Q.Seq.d/                       1247   0.0
SHJ886 (SHJ886Q) /CSM/SH/SHJ8-D/SHJ886Q.Seq.d/                       1229   0.0
SHJ668 (SHJ668Q) /CSM/SH/SHJ6-C/SHJ668Q.Seq.d/                       1229   0.0
SHG326 (SHG326Q) /CSM/SH/SHG3-B/SHG326Q.Seq.d/                       1229   0.0
SHF242 (SHF242Q) /CSM/SH/SHF2-B/SHF242Q.Seq.d/                       1229   0.0
SHC693 (SHC693Q) /CSM/SH/SHC6-D/SHC693Q.Seq.d/                       1229   0.0
SHB522 (SHB522Q) /CSM/SH/SHB5-A/SHB522Q.Seq.d/                       1229   0.0
SHB423 (SHB423Q) /CSM/SH/SHB4-A/SHB423Q.Seq.d/                       1229   0.0
SHA693 (SHA693Q) /CSM/SH/SHA6-D/SHA693Q.Seq.d/                       1229   0.0

Homology SHJ893 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


U67940|U67940.1 Dictyostelium discoideum ORFveg106 mRNA, com...    60   4e-14  5
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 ma...    66   2e-11  7
AB053203|AB053203.1 Dictyostelium discoideum psiA mRNA for P...    56   2e-07  2
AJ548837|AJ548837.1 Dictyostelium discoideum mRNA for extrac...    54   0.003  2
AJ548838|AJ548838.1 Dictyostelium discoideum dicA gene for e...    54   0.003  2
AE014823|AE014823.1 Plasmodium falciparum 3D7 chromosome 14 ...    38   0.18   11
AF362371|AF362371.1 Dictyostelium discoideum histidine kinas...    42   0.34   2
AX251444|AX251444.1 Sequence 412 from Patent WO0168912.            38   0.51   3
BD452965|BD452965.1 Diagnosis of Diseases Associated with tu...    38   0.51   3
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma...    48   0.58   1

Homology SHJ893 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54C31) RecName: Full=Protein psiR; Flags: Precursor;                488   e-145
(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor;                315   9e-91
(Q1ZXC5) RecName: Full=Protein psiC; Flags: Precursor;                217   9e-60
(Q54FD8) RecName: Full=Protein psiD; Flags: Precursor;                224   1e-56
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor;                171   2e-43
(Q968Z6) RecName: Full=Protein psiA; AltName: Full=Prespore-cell...   179   4e-43
(Q94494) RecName: Full=Protein psiH; Flags: Precursor;  &U67940_...   177   2e-42
(Q55FQ4) RecName: Full=Protein psiB; Flags: Precursor;                176   4e-42
(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor;  &AC11695...   176   4e-42
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor;                171   1e-40

Homology SHJ893 vs Genome