Homology SHJ893 vs DNA
Query= SHJ893 (SHJ893Q) /CSM/SH/SHJ8-D/SHJ893Q.Seq.d/
(1452 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum22.seq; ddbjhum23.seq;
ddbjhum3.seq; ddbjhum4.seq; ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq;
ddbjhum8.seq; ddbjhum9.seq; /db/DDBJNEW.DATA/b/new_ddbjhum.seq;
ddbjpri1.seq; ddbjpri2.seq; /db/DDBJNEW.DATA/b/new_ddbjpri.seq;
ddbjrod1.seq; ddbjrod10.seq; ddbjrod11.seq; ddbjrod12.seq;
ddbjrod13.seq; ddbjrod14.seq; ddbjrod15.seq; ddbjrod16.seq;
ddbjrod17.seq; ddbjrod18.seq; ddbjrod19.seq; ddbjrod2.seq;
ddbjrod20.seq; ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq;
ddbjrod7.seq; ddbjrod8.seq; ddbjrod9.seq;
/db/DDBJNEW.DATA/b/new_ddbjrod.seq; ddbjmam1.seq; ddbjmam2.seq;
/db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; ddbjvrt4.seq; ddbjvrt5.seq; ddbjvrt6.seq; ddbjvrt7.seq;
ddbjvrt8.seq; ddbjvrt9.seq; /db/DDBJNEW.DATA/b/new_ddbjvrt.seq;
ddbjinv1.seq; ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
ddbjinv6.seq; ddbjinv7.seq; /db/DDBJNEW.DATA/b/new_ddbjinv.seq;
ddbjpln1.seq; ddbjpln10.seq; ddbjpln11.seq; ddbjpln12.seq;
ddbjpln13.seq; ddbjpln14.seq; ddbjpln2.seq; ddbjpln3.seq;
ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq; ddbjpln8.seq;
ddbjpln9.seq; /db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct10.seq; ddbjbct11.seq; ddbjbct2.seq; ddbjbct3.seq;
ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq; ddbjbct7.seq; ddbjbct8.seq;
ddbjbct9.seq; /db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq;
ddbjvrl2.seq; ddbjvrl3.seq; ddbjvrl4.seq; ddbjvrl5.seq;
/db/DDBJNEW.DATA/b/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss100.seq; ddbjgss101.seq; ddbjgss102.seq; ddbjgss103.seq;
ddbjgss104.seq; ddbjgss105.seq; ddbjgss106.seq; ddbjgss107.seq;
ddbjgss108.seq; ddbjgss109.seq; ddbjgss11.seq; ddbjgss110.seq;
ddbjgss111.seq; ddbjgss112.seq; ddbjgss113.seq; ddbjgss114.seq;
ddbjgss115.seq; ddbjgss116.seq; ddbjgss117.seq; ddbjgss118.seq;
ddbjgss119.seq; ddbjgss12.seq; ddbjgss120.seq; ddbjgss121.seq;
ddbjgss122.seq; ddbjgss123.seq; ddbjgss124.seq; ddbjgss125.seq;
ddbjgss126.seq; ddbjgss127.seq; ddbjgss128.seq; ddbjgss129.seq;
ddbjgss13.seq; ddbjgss130.seq; ddbjgss131.seq; ddbjgss132.seq;
ddbjgss133.seq; ddbjgss134.seq; ddbjgss135.seq; ddbjgss136.seq;
ddbjgss137.seq; ddbjgss14.seq; ddbjgss15.seq; ddbjgss16.seq;
ddbjgss17.seq; ddbjgss18.seq; ddbjgss19.seq; ddbjgss2.seq;
ddbjgss20.seq; ddbjgss21.seq; ddbjgss22.seq; ddbjgss23.seq;
ddbjgss24.seq; ddbjgss25.seq; ddbjgss26.seq; ddbjgss27.seq;
ddbjgss28.seq; ddbjgss29.seq; ddbjgss3.seq; ddbjgss30.seq;
ddbjgss31.seq; ddbjgss32.seq; ddbjgss33.seq; ddbjgss34.seq;
ddbjgss35.seq; ddbjgss36.seq; ddbjgss37.seq; ddbjgss38.seq;
ddbjgss39.seq; ddbjgss4.seq; ddbjgss40.seq; ddbjgss41.seq;
ddbjgss42.seq; ddbjgss43.seq; ddbjgss44.seq; ddbjgss45.seq;
ddbjgss46.seq; ddbjgss47.seq; ddbjgss48.seq; ddbjgss49.seq;
ddbjgss5.seq; ddbjgss50.seq; ddbjgss51.seq; ddbjgss52.seq;
ddbjgss53.seq; ddbjgss54.seq; ddbjgss55.seq; ddbjgss56.seq;
ddbjgss57.seq; ddbjgss58.seq; ddbjgss59.seq; ddbjgss6.seq;
ddbjgss60.seq; ddbjgss61.seq; ddbjgss62.seq; ddbjgss63.seq;
ddbjgss64.seq; ddbjgss65.seq; ddbjgss66.seq; ddbjgss67.seq;
ddbjgss68.seq; ddbjgss69.seq; ddbjgss7.seq; ddbjgss70.seq;
ddbjgss71.seq; ddbjgss72.seq; ddbjgss73.seq; ddbjgss74.seq;
ddbjgss75.seq; ddbjgss76.seq; ddbjgss77.seq; ddbjgss78.seq;
ddbjgss79.seq; ddbjgss8.seq; ddbjgss80.seq; ddbjgss81.seq;
ddbjgss82.seq; ddbjgss83.seq; ddbjgss84.seq; ddbjgss85.seq;
ddbjgss86.seq; ddbjgss87.seq; ddbjgss88.seq; ddbjgss89.seq;
ddbjgss9.seq; ddbjgss90.seq; ddbjgss91.seq; ddbjgss92.seq;
ddbjgss93.seq; ddbjgss94.seq; ddbjgss95.seq; ddbjgss96.seq;
ddbjgss97.seq; ddbjgss98.seq; ddbjgss99.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss1.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg53.seq; ddbjhtg54.seq;
ddbjhtg55.seq; ddbjhtg56.seq; ddbjhtg57.seq; ddbjhtg58.seq;
ddbjhtg59.seq; ddbjhtg6.seq; ddbjhtg60.seq; ddbjhtg61.seq;
ddbjhtg62.seq; ddbjhtg63.seq; ddbjhtg64.seq; ddbjhtg65.seq;
ddbjhtg66.seq; ddbjhtg7.seq; ddbjhtg8.seq; ddbjhtg9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhtg1.seq;
/db/DDBJNEW.DATA/b/new_ddbjhtg2.seq; ddbjpat1.seq; ddbjpat10.seq;
ddbjpat11.seq; ddbjpat12.seq; ddbjpat13.seq; ddbjpat14.seq;
ddbjpat15.seq; ddbjpat16.seq; ddbjpat17.seq; ddbjpat18.seq;
ddbjpat19.seq; ddbjpat2.seq; ddbjpat20.seq; ddbjpat3.seq;
ddbjpat4.seq; ddbjpat5.seq; ddbjpat6.seq; ddbjpat7.seq; ddbjpat8.seq;
ddbjpat9.seq; /db/DDBJNEW.DATA/b/new_ddbjpat.seq; ddbjsts1.seq;
ddbjsts10.seq; ddbjsts11.seq; ddbjsts12.seq; ddbjsts2.seq;
ddbjsts3.seq; ddbjsts4.seq; ddbjsts5.seq; ddbjsts6.seq; ddbjsts7.seq;
ddbjsts8.seq; ddbjsts9.seq; /db/DDBJNEW.DATA/b/new_ddbjsts.seq;
ddbjsyn.seq; /db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq;
/db/DDBJNEW.DATA/b/new_est_cele1.seq; est_crei1.seq; est_cint1.seq;
/db/DDBJNEW.DATA/b/new_est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/b/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/b/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; est_hum5.seq;
/db/DDBJNEW.DATA/b/new_est_hum1.seq;
/db/DDBJNEW.DATA/b/new_est_hum2.seq; est_hvul1.seq;
/db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/b/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/b/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/b/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/b/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
est_rest3.seq; est_rest4.seq; est_rest5.seq; est_rest6.seq;
est_rest7.seq; est_rest8.seq; est_rest9.seq;
/db/DDBJNEW.DATA/b/new_est_rest1.seq;
/db/DDBJNEW.DATA/b/new_est_rest2.seq
56,571,066 sequences; 61,523,538,385 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
U67940|U67940.1 Dictyostelium discoideum ORFveg106 mRNA, com... 60 4e-14 5
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 ma... 66 2e-11 7
AB053203|AB053203.1 Dictyostelium discoideum psiA mRNA for P... 56 2e-07 2
AJ548837|AJ548837.1 Dictyostelium discoideum mRNA for extrac... 54 0.003 2
AJ548838|AJ548838.1 Dictyostelium discoideum dicA gene for e... 54 0.003 2
AE014823|AE014823.1 Plasmodium falciparum 3D7 chromosome 14 ... 38 0.18 11
AF362371|AF362371.1 Dictyostelium discoideum histidine kinas... 42 0.34 2
AX251444|AX251444.1 Sequence 412 from Patent WO0168912. 38 0.51 3
BD452965|BD452965.1 Diagnosis of Diseases Associated with tu... 38 0.51 3
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma... 48 0.58 1
AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 ma... 44 0.59 10
AE016826|AE016826.1 Buchnera aphidicola str. Bp (Baizongia p... 40 0.83 15
AC117076|AC117076.3 Dictyostelium discoideum chromosome 2 ma... 34 2.1 9
CZ291153|CZ291153.1 cp74a11.f Candida parapsilosis Random Ge... 46 2.3 1
AC020547|AC020547.7 Homo sapiens BAC clone RP11-134F3 from 2... 46 2.3 1
AL359090|AL359090.15 Human DNA sequence from clone RP11-69P2... 42 2.5 2
CW940928|CW940928.1 TcB22.1_A03_SP6 Tribolium BAC library Tr... 38 3.1 2
BX927286|BX927286.7 Zebrafish DNA sequence *** SEQUENCING IN... 42 4.1 8
AC156695|AC156695.2 Bos taurus clone CH240-56A7, *** SEQUENC... 32 4.1 2
AC148669|AC148669.1 Macaca mulatta Major Histocompatibility ... 34 4.3 2
AC168497|AC168497.2 Strongylocentrotus purpuratus clone R3-3... 34 4.3 2
AL161510|AL161510.2 Arabidopsis thaliana DNA chromosome 4, c... 42 5.1 5
CB108395|CB108395.1 K-EST0148326 L4SNU368 Homo sapiens cDNA ... 34 5.8 2
CJ453170|CJ453170.1 Macaca fascicularis mRNA, clone: QflA-18... 32 6.5 3
AC009177|AC009177.7 Arabidopsis thaliana chromosome III BAC ... 32 8.1 7
CV752175|CV752175.1 SJL6-009_A06_SJL6-009A06-T3_039.ab1 SJL ... 44 9.1 1
CV752026|CV752026.1 SJL6-007_B08_SJL6-007B08-T3_063.ab1 SJL ... 44 9.1 1
CV682259|CV682259.1 sjs6-009_H10_sjs6-009H10-T3 SJS Schistos... 44 9.1 1
CV739281|CV739281.1 SJAL_019_73.T3 SJL Schistosoma japonicum... 44 9.1 1
CV581768|CV581768.1 sjmi-1-002_E12_sjmi-1-002E12-T3 Schistos... 44 9.1 1
CV739266|CV739266.1 SJAL_019_64.T3 SJL Schistosoma japonicum... 44 9.1 1
CO637331|CO637331.1 USDA-FP_106068 Adult Glassy-winged Sharp... 44 9.1 1
BU725144|BU725144.1 SJMBXF01 SJM Schistosoma japonicum cDNA,... 44 9.1 1
CT827854|CT827854.1 Pig DNA sequence *** SEQUENCING IN PROGR... 44 9.1 1
AC185674|AC185674.1 Bos taurus clone RP42-237N3, WORKING DRA... 44 9.1 1
CV369478|CV369478.1 PM2-HT0927-080900-004-g08 HT0927 Homo sa... 44 9.1 1
AC182054|AC182054.3 Bos taurus clone CH240-429G14, *** SEQUE... 44 9.1 1
AC166348|AC166348.1 Mus musculus chromosome 15 clone RP24-94... 44 9.1 1
AC165023|AC165023.2 Bos taurus clone CH240-167G1, WORKING DR... 44 9.1 1
AC155853|AC155853.2 Bos taurus clone CH240-45P19, *** SEQUEN... 44 9.1 1
CE271640|CE271640.1 tigr-gss-dog-17000333554387 Dog Library ... 44 9.1 1
BZ922370|BZ922370.1 CH240_120P2.TV CHORI-240 Bos taurus geno... 44 9.1 1
BZ438331|BZ438331.1 BONES46TF BO_1.6_2_KB_tot Brassica olera... 44 9.1 1
BX166639|BX166639.1 Danio rerio genomic clone DKEY-123E12, g... 44 9.1 1
BH585502|BH585502.1 BOHOU48TF BOHO Brassica oleracea genomic... 44 9.1 1
DU340847|DU340847.1 1098313029058 CHORI-243 Ovis aries genom... 44 9.1 1
DU200195|DU200195.1 1098553679288 CHORI-243 Ovis aries genom... 44 9.1 1
CW149393|CW149393.1 104_548_11142468_116_36292_042 Sorghum m... 44 9.1 1
CW446497|CW446497.1 fsbb001f179c24k0 Sorghum methylation fil... 44 9.1 1
CW110937|CW110937.1 104_484_11104018_148_34528_047 Sorghum m... 44 9.1 1
CW209460|CW209460.1 104_639_11189257_148_36990_007 Sorghum m... 44 9.1 1
CT417482|CT417482.1 Sus scrofa genomic clone CH242-433J9, ge... 44 9.1 1
AB081020|AB081020.1 JC virus DNA, complete genome, isolate:M... 44 9.1 1
AP005729|AP005729.3 Oryza sativa (japonica cultivar-group) g... 44 9.1 1
BA000019|BA000019.2 Nostoc sp. PCC 7120 DNA, complete genome. 44 9.1 1
AP008215|AP008215.1 Oryza sativa (japonica cultivar-group) g... 44 9.1 1
BX936417|BX936417.8 Zebrafish DNA sequence from clone DKEY-2... 44 9.1 1
AC125182|AC125182.3 Mus musculus BAC clone RP23-293D23 from ... 44 9.1 1
BX004770|BX004770.12 Zebrafish DNA sequence from clone DKEY-... 44 9.1 1
AL096814|AL096814.26 Human DNA sequence from clone RP1-139D8... 44 9.1 1
CN816594|CN816594.1 HRO4522_F02_K04ZS5 Lib AA071E1X Avena sa... 36 9.5 3
AC023716|AC023716.4 Drosophila melanogaster X BAC RP98-45E21... 38 9.6 5
>U67940|U67940.1 Dictyostelium discoideum ORFveg106 mRNA, complete
cds.
Length = 2441
Score = 60.0 bits (30), Expect(5) = 4e-14
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 190 ggtgatgatgatgtttgggtatttattaataatattttggttgtggattt 239
||||||||||||||||||||||| |||||||| | |||||||| |||||
Sbjct: 643 ggtgatgatgatgtttgggtattcattaataacaaattggttgtcgattt 692
Score = 42.1 bits (21), Expect(5) = 4e-14
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 316 tttgatttcttttattgtgaa 336
|||||||||||||||||||||
Sbjct: 769 tttgatttcttttattgtgaa 789
Score = 34.2 bits (17), Expect(5) = 4e-14
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 118 cataatttccacttttgttta 138
||||||||||| |||||||||
Sbjct: 571 cataatttccatttttgttta 591
Score = 26.3 bits (13), Expect(5) = 4e-14
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 698 aatttacaagtat 710
|||||||||||||
Sbjct: 826 aatttacaagtat 838
Score = 26.3 bits (13), Expect(5) = 4e-14
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 923 aaatgtttattag 935
|||||||||||||
Sbjct: 1126 aaatgtttattag 1138
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 62,490,597
Number of Sequences: 56571066
Number of extensions: 62490597
Number of successful extensions: 5024306
Number of sequences better than 10.0: 124
length of query: 1452
length of database: 61,523,538,385
effective HSP length: 24
effective length of query: 1428
effective length of database: 60,165,832,801
effective search space: 85916809239828
effective search space used: 85916809239828
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home