Dictyostelium discoideum cDNA Clone SHJ886

Sequence SHJ886

ACTGTTGGCC TACTGGGTAA TTCACCAAGT GCAACAATTC ATAACCAAAC
CACATTCCAA TCATGGTTTC ACAATGTTCC AGGTGTGAAT CTTCCAATTC
AAAAAGATAT CATTCTTACA CAATCTCTTT CAAATCCAAA TATTTATTCC
TACAGTAATG ATTCTTATTT TGTAATTGAT GGTCAAGGTT TTGATGACAA
ATCAGTTTAT CCAAATGAAA GAGTTTATCG TGACGCTTTT GGAAATCCAC
ATAATTTCCA CTTTTGTTTA CAAGCTCATA CCGAATTTCA ATATAAAACT
GGTGATGTTT TTAATTTTGC AGGTGATGAT GATGTTTGGG TATTTATTAA
TAATATTTTG GTTGTGGATT TGGGAGGTAT TCATACAATT GCAAGTGCAA
GTGTTAACTT GGATTTATTG GGTTTAACAC CTGGACAAAA TTATCCATTT
GATTTCTTTT ATTGTGAACG TCACACTGTA GAATCTCATA TAAGAATTGA
AACATCTTTG GCATTCAAGT GTCCTCGATA TGATGAATGT GGTGTCTGTG
AAGGTGATGG TACTTCTTGT TGTACTCCAA ATAATTGTGA TAATAATCCA
ATTTATAGAA CCAACTGTAT AACAGCAAAA TGTTCAAATA ATGTTTGCGT
TACTTC---- ------CCCA TCAGATGATG CATGTAATTT ACAAGTATGT
TCTGAAACTG GAGATAGTTG TCTTACAATG GTTTTAAATT GTGATGATAA
TAACGATTGT ACTGAAGATA AGTGTTTAAA TACTGGTATT TGTCAAAATA
ATCCAATTGA CGGTTGTGTT ACACCATCAC CAGTTTCAAT TGGTGGAACT
ATCCCTCCAA CCACTACTGG TGTATCACAA GTTGAGTGTG ATTGTTGTCC
AATTGGTCAA AAATGTTTAT TAGTCAATGG TCATGAAATT TGTATTAAAC
CAGCAACCAC TGGTGGTATT CCAGAATTAA CTACTGGTTG TGCTGGTACA
ACAACTGGCA GGGCTACAGG TCATTACACA GAATCAGGTA CAGGTAATCC
ACATTTATGT GATAGATATC ATTGTAAAAG AGGAATGGAA TGTCATGTTG
TTAATGGTGT TCCAGAATGT TTACCATCAA ACTACAAATG TTTAGATTGT
TTAGATCTTC ATTGTGAGAG ACAAGGTGAT TTCACCTGTT TTATGGTTAA
AAATCCAAAT TTCATTTCTA GTAAACATAG TTGTTATGGT GAATCATGTT
GTAAATTCAC ACCAGTTTGC AAACCAAAAG GACACTCACT TTAAAAAAAA
CTAAAATTAA TATATTATTT CTTTTCTTTT TATTATATAT TTTTATTAAA
ATTTTATAAC CAAGTCAACT AATTTCAATT TAATATTACA ATATAAACAT
TAAGTTTATT GTAAAATTTA ATAATAAATA AAAAAACAAC TGCCCCA

Translated Amino Acid Sequence SHJ886

TVGLLGNSPSATIHNQTTFQSWFHNVPGVNLPIQKDIILTQSLSNPNIYSYSNDSYFVID
GQGFDDKSVYPNERVYRDAFGNPHNFHFCLQAHTEFQYKTGDVFNFAGDDDVWVFINNIL
VVDLGGIHTIASASVNLDLLGLTPGQNYPFDFFYCERHTVESHIRIETSLAFKCPRYDEC
GVCEGDGTSCCTPNNCDNNPIYRTNCITAKCSNNVCVT---

---PSDDACNLQVCSETGDSCLTMVLNCDDNNDCTEDKCLNTGICQNNPIDGCVTPSPVS
IGGTIPPTTTGVSQVECDCCPIGQKCLLVNGHEICIKPATTGGIPELTTGCAGTTTGRAT
GHYTESGTGNPHLCDRYHCKRGMECHVVNGVPECLPSNYKCLDCLDLHCERQGDFTCFMV
KNPNFISSKHSCYGESCCKFTPVCKPKGHSL*kklkliyyffsfyyifllkfynqvn*fq
fniti*tlsll*nliinkkttap

Homology SHJ886 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SHJ886 (SHJ886Q) /CSM/SH/SHJ8-D/SHJ886Q.Seq.d/                       2502   0.0
SHD437 (SHD437Q) /CSM/SH/SHD4-B/SHD437Q.Seq.d/                       1245   0.0
SHJ668 (SHJ668Q) /CSM/SH/SHJ6-C/SHJ668Q.Seq.d/                       1239   0.0
SHF242 (SHF242Q) /CSM/SH/SHF2-B/SHF242Q.Seq.d/                       1239   0.0
SHB522 (SHB522Q) /CSM/SH/SHB5-A/SHB522Q.Seq.d/                       1239   0.0
SHB423 (SHB423Q) /CSM/SH/SHB4-A/SHB423Q.Seq.d/                       1239   0.0
SHA693 (SHA693Q) /CSM/SH/SHA6-D/SHA693Q.Seq.d/                       1239   0.0
CHG220 (CHG220Q) /CSM/CH/CHG2-A/CHG220Q.Seq.d/                       1239   0.0
AHE486 (AHE486Q) /CSM/AH/AHE4-D/AHE486Q.Seq.d/                       1239   0.0
AHB727 (AHB727Q) /CSM/AH/AHB7-B/AHB727Q.Seq.d/                       1239   0.0

Homology SHJ886 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


U67940|U67940.1 Dictyostelium discoideum ORFveg106 mRNA, com...    60   4e-14  5
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 ma...    66   2e-11  7
AB053203|AB053203.1 Dictyostelium discoideum psiA mRNA for P...    56   2e-07  2
AJ548837|AJ548837.1 Dictyostelium discoideum mRNA for extrac...    54   0.003  2
AJ548838|AJ548838.1 Dictyostelium discoideum dicA gene for e...    54   0.003  2
AF362371|AF362371.1 Dictyostelium discoideum histidine kinas...    42   0.34   2
AE014823|AE014823.1 Plasmodium falciparum 3D7 chromosome 14 ...    38   0.48   11
AX251444|AX251444.1 Sequence 412 from Patent WO0168912.            38   0.50   3
BD452965|BD452965.1 Diagnosis of Diseases Associated with tu...    38   0.50   3
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma...    48   0.58   1

Homology SHJ886 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54C31) RecName: Full=Protein psiR; Flags: Precursor;                464   e-134
(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor;                328   1e-88
(Q54FD8) RecName: Full=Protein psiD; Flags: Precursor;                231   5e-64
(Q1ZXC5) RecName: Full=Protein psiC; Flags: Precursor;                224   8e-62
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor;                207   2e-51
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor;                206   2e-51
(Q94494) RecName: Full=Protein psiH; Flags: Precursor;  &U67940_...   180   5e-46
(Q55FQ4) RecName: Full=Protein psiB; Flags: Precursor;                188   6e-46
(Q968Z6) RecName: Full=Protein psiA; AltName: Full=Prespore-cell...   187   1e-45
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor;                180   2e-43

Homology SHJ886 vs Genome