Dictyostelium discoideum cDNA Clone SHD769

Sequence SHD769

CATAAAAATA AGAATAATAA TAATAAAATA ATAATAATAA TAATAATAAC
AAACTCAATA AAAATAAAAA AAAAATGTCA TCATTGAGCG ATTGGGAAAA
TACAAAAGAA AATATAGTTC CTCTTAAAAC TGGTAGGGAC CCAACTAAAC
TTGCATTATT TGCAAAACAA ACAAATCAAT CAGATGAAGA ATTAGAAAAA
GAAAAACAAA AATTTGAAAT AATTATAAAT GAATACCAAG GNGAAGATCC
AATTGATAAT TGGTTAAAAT ATATAAAATG GGTACAACAA TCATATCCAG
GTGGTAATAT GAAANAACAA TTAATTGTAT TATTANAGAG ATGTACAAGA
TTATTTTTAA GTACAGAGAA ATATAAAAAT GATCCACGTT ATTTAANAAT
TTGGATTACA TATGCCGATA TGTGTANAGA TCCAATTGAA GTATTCTCAT
TTTTANAGGT ACAACGTATA GGTTTCTATC TTTCATTACT CTATGAAGCA
AGAG------ ----TGAAAG TACATTAATG AAATCAACAA TCGATAATAA
TAANAATGAT AATAATAATA ATAATAATAA TAATAATAAT AATAACAATA
ATAAAAATAC TGATGTTTCA TTTGATGAGA AATCAATTGA AGATCAAGAA
AACATTGATC CAAATCAAGG TGGTGGTGGT GGTAATAATG ATGGTAATCC
TTTATTATCA AGTAAAATTA CAAATCGTGA TGTATTAATG AAACAATTAT
TCTCAAAGGA TGAAGATGAA GGAAACCAAT TTGATCAAGA AAGAGATATG
GTAAAAACAA TTGAAAGAAT TGATTTATTA GTAAAGGGTA AAGATACTCC
AAAGTTTGAA ATTTTCGAAG ATTCAACTTT AGCTTCAAGT CAATTACATT
CAAAGAGTGT TAGTTTAGCT GATAAGGTTG CAAGTAAAAA TAAACAATTA
AATCCATTGG AACAATCTCA AAATCCATTG AAAAAGTCAA TATTAGGTAG
TAGTGGTATC AATGGTATCA ATGGTAATAA TGGCGGTTTT ACCATTTTCC
AAGACCAACC AAACCAAGAG AAGAAACAAC CATTACAACA ATCACAATTA
CAAAATCCAT TGAAAAACTC AATCTTAGGT ATCAGTGATG CTAATGGTAA
TGGTGGTGGT GGTGGTAGTG GTAGTGGTAG TGGTGGTTTT ACAATTTTCC
AAGATCAAGC AGCGAAGAAA AAAAACCATT TAANAGAAAG AACAACAACA
ACA

Translated Amino Acid Sequence SHD769

*k*e****NNNNNNNNKLNKNKKKMSSLSDWENTKENIVPLKTGRDPTKLALFAKQTNQS
DEELEKEKQKFEIIINEYQGEDPIDNWLKYIKWVQQSYPGGNMKXQLIVLLXRCTRLFLS
TEKYKNDPRYLXIWITYADMCXDPIEVFSFLXVQRIGFYLSLLYEAR---

---ESTLMKSTIDNNXNDNNNNNNNNNNNNNNKNTDVSFDEKSIEDQENIDPNQGGGGGN
NDGNPLLSSKITNRDVLMKQLFSKDEDEGNQFDQERDMVKTIERIDLLVKGKDTPKFEIF
EDSTLASSQLHSKSVSLADKVASKNKQLNPLEQSQNPLKKSILGSSGINGINGNNGGFTI
FQDQPNQEKKQPLQQSQLQNPLKNSILGISDANGNGGGGGSGSGSGGFTIFQDQAAKKKN
HLXERTTTT

Homology SHD769 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SHD769 (SHD769Q) /CSM/SH/SHD7-C/SHD769Q.Seq.d/                       1070   0.0
SHA694 (SHA694Q) /CSM/SH/SHA6-D/SHA694Q.Seq.d/                       1063   0.0
AFL151 (AFL151Q) /CSM/AF/AFL1-C/AFL151Q.Seq.d/                        454   e-126
CHM870 (CHM870Q) /CSM/CH/CHM8-C/CHM870Q.Seq.d/                        400   e-110
VHJ358 (VHJ358Q) /CSM/VH/VHJ3-C/VHJ358Q.Seq.d/                         52   2e-05
SLA289 (SLA289Q) /CSM/SL/SLA2-D/SLA289Q.Seq.d/                         52   2e-05
SHL792 (SHL792Q) /CSM/SH/SHL7-D/SHL792Q.Seq.d/                         52   2e-05
SHJ785 (SHJ785Q) /CSM/SH/SHJ7-D/SHJ785Q.Seq.d/                         52   2e-05
SHJ509 (SHJ509Q) /CSM/SH/SHJ5-A/SHJ509Q.Seq.d/                         52   2e-05
SHF790 (SHF790Q) /CSM/SH/SHF7-D/SHF790Q.Seq.d/                         52   2e-05

Homology SHD769 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


G65032|G65032.1 DH0564 Dictyostelium discoideum ( P.Dear ) D...   303   8e-86  2
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma...    36   0.004  9
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma...    44   0.008  13
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma...    34   0.010  11
AC116919|AC116919.2 Dictyostelium discoideum chromosome 2 ma...    38   0.027  7
AC136557|AC136557.2 Rattus norvegicus clone CH230-66G6, *** ...    44   0.055  5
AC136039|AC136039.1 Rattus norvegicus clone CH230-312L13, **...    44   0.058  5
AC135011|AC135011.3 Rattus norvegicus clone CH230-4A10, *** ...    44   0.072  6
AC117176|AC117176.2 Dictyostelium discoideum chromosome 2 ma...    32   0.090  12
AC171199|AC171199.1 Mus musculus BAC clone RP24-469I17 from ...    50   0.12   1

Homology SHD769 vs Protein

Sequences producing significant alignments:                      (bits) Value


BC135240_1(BC135240|pid:none) Xenopus tropicalis hypothetical pr...   114   9e-24
CP001327_179(CP001327|pid:none) Micromonas sp. RCC299 chromosome...   113   3e-23
AB574507_1(AB574507|pid:none) Oryzias latipes bubr1 mRNA for bub...   112   4e-23
BC073023_1(BC073023|pid:none) Xenopus laevis BUB1 budding uninhi...   111   1e-22
AY245433_1(AY245433|pid:none) Gallus gallus spindle checkpoint p...   111   1e-22
AY095442_1(AY095442|pid:none) Xenopus laevis spindle checkpoint ...   111   1e-22
BC169729_1(BC169729|pid:none) Xenopus laevis BUB1 budding uninhi...   111   1e-22
AJ851703_1(AJ851703|pid:none) Gallus gallus mRNA for hypothetica...   110   2e-22
AC140774_9(AC140774|pid:none) Medicago truncatula clone mth2-5e1...   110   2e-22
AK133909_1(AK133909|pid:none) Mus musculus 8 days embryo whole b...   109   3e-22

Homology SHD769 vs Genome