Homology SHC248 vs Protein

Query= SHC248 (SHC248Q) /CSM/SH/SHC2-B/SHC248Q.Seq.d/
         (728 letters)

Database: nrp_B
           5,349,213 sequences; 1,732,582,204 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(O76329) RecName: Full=Interaptin; AltName: Full=Actin-binding p...   149   2e-34

>(O76329) RecName: Full=Interaptin; AltName: Full=Actin-binding
            protein D; AltName: Full=Alpha-actinin B;
            &AF057019_1(AF057019|pid:none) &T14867(T14867)
          Length = 1738

 Score =  149 bits (375), Expect = 2e-34
 Identities = 98/207 (47%), Positives = 98/207 (47%)
 Frame = +1

Query: 100  LSEKDQQLNQLIEKNESDXXXXXXXXXSIENDXXXXXXXXXXXXXXXXXXXXXXSEVSID 279
            LSEKDQQLNQLIEKNESD         SIEND                      SEVSID
Sbjct: 1086 LSEKDQQLNQLIEKNESDQKEQQLKQQSIENDLIEKENQIQQLQLQLNEQRQLQSEVSID 1145

Query: 280  NDKILELEKQLKQCQSXXXXXXXXXXXXXXXXXXXXIGFDQLQLTFNQFKNDKDSXXXXX 459
            NDKILELEKQLKQCQS                    I FDQLQLTFNQFKNDKDS
Sbjct: 1146 NDKILELEKQLKQCQSDLLKLNDEKQQQDKQLQDKQIEFDQLQLTFNQFKNDKDSQFIQL 1205

Query: 460  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEKLQSIQLENQEKEKQLSEKDEKXXXX 639
                                            DEKLQSIQ ENQEKEKQLSEKDEK
Sbjct: 1206 QDDQKQQLQSIQQDLNQLKQENQEKEKQLSEKDEKLQSIQFENQEKEKQLSEKDEKLQSI 1265

Query: 640  XXXXXXXXXXXXXKVKQFSEKXEKPQS 720
                         KVKQFSEK EK QS
Sbjct: 1266 QQNLNQLNDENQEKVKQFSEKDEKLQS 1292

 Score = 41.2 bits (95), Expect = 0.052
 Identities = 21/32 (65%), Positives = 22/32 (68%)
 Frame = +1

Query: 100  LSEKDQQLNQLIEKNESDXXXXXXXXXSIEND 195
            LSEKDQQLNQLIEKN+ D         SIEND
Sbjct: 1029 LSEKDQQLNQLIEKNQFDQKEQQLKQQSIEND 1060

 Score = 41.2 bits (95), Expect = 0.052
 Identities = 27/59 (45%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
 Frame = +1

Query: 556  DEKLQSIQL-------ENQEKEKQLSEKDEKXXXXXXXXXXXXXXXXXKVKQFSEKXEK 711
            DEKLQSIQ        ENQEKEKQLSEKDEK                 K ++  EK E+
Sbjct: 1287 DEKLQSIQQDLNQLKQENQEKEKQLSEKDEKLQSIQQDLNQLNDDQIKKNEKLKEKEEQ 1345

Lambda     K      H
   0.300    0.122    0.298

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 529,450,987
Number of extensions: 4440350
Number of successful extensions: 8732
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8702
Number of HSP's successfully gapped: 3
Length of query: 242
Length of database: 1,732,582,204
Length adjustment: 128
Effective length of query: 114
Effective length of database: 1,047,882,940
Effective search space: 119458655160
Effective search space used: 119458655160
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 6.9 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.8 bits)
S2: 31 (16.5 bits)