Dictyostelium discoideum cDNA Clone SHC248

Sequence SHC248

---------- ATCAATTGAA AATGATTGTT GAAAAAGAGA ATCAAATTCA
ACAATNGCAA TCNCAATTAA ATGACCAAAG CCACCACCAA TCAAATCAGT
TGTCTGAAAA AGATCAACAA TTGAATCAAT TAATTGAAAA GAATGAATCT
GATCAAAAAG ANCAACAATT AAAACAACAA TCAATTGAAA ATGATTTAAT
TGAAAAAGAG AATCAAATTC AACAATTACA ATTACAATTA AATGAACAAA
GACAACTACA ATCTGAAGTA TCAATTGATA ATGATAAAAT TTTAGAATTA
GAAAAACAAT TAAAACAATG TCAATCGGAT TTATTGAAAT TAAATGATGA
AAAACAACAA CAAGATAAAC AATTACAAGA TAAACAAATT GGATTTGATC
AATTACAATT AACTTTTAAT CAATTTAAAA ATGATAAAGA TTCACAATTC
ATTCAATTAC AAGATGATCA AAAACAACAA TTACAATCAA TCCAACAAGA
TTTAAATCAA TTAAAACAAG AAAATCAAGA AAAAGAAAAA CAACTCTCTG
AAAAGGATGA AAAATTACAA TCAATTCAAC TTGAGAATCA AGAAAAAGAA
AAACAACTCT CTGAAAAGGA TGAAAAGTTA CAATCAATTC AACAAAATTT
AAATCAATTA AATGATGAAA ATCAAGAAAA AGTAAAACAA TTTTCTGAAA
AAGANGAAAA GCCCCAATCN GATTCANC

Translated Amino Acid Sequence SHC248

---QLKMIVEKENQIQQXQSQLNDQSHHQSNQLSEKDQQLNQLIEKNESDQKXQQLKQQS
IENDLIEKENQIQQLQLQLNEQRQLQSEVSIDNDKILELEKQLKQCQSDLLKLNDEKQQQ
DKQLQDKQIGFDQLQLTFNQFKNDKDSQFIQLQDDQKQQLQSIQQDLNQLKQENQEKEKQ
LSEKDEKLQSIQLENQEKEKQLSEKDEKLQSIQQNLNQLNDENQEKVKQFSEKXEKPQSD
S

Homology SHC248 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SHC248 (SHC248Q) /CSM/SH/SHC2-B/SHC248Q.Seq.d/                        916   0.0
SHA355 (SHA355Q) /CSM/SH/SHA3-C/SHA355Q.Seq.d/                        880   0.0
AFL480 (AFL480Q) /CSM/AF/AFL4-D/AFL480Q.Seq.d/                        829   0.0
CHN274 (CHN274Q) /CSM/CH/CHN2-D/CHN274Q.Seq.d/                        339   4e-92
AHH728 (AHH728Q) /CSM/AH/AHH7-B/AHH728Q.Seq.d/                        252   6e-66
SSL560 (SSL560Q) /CSM/SS/SSL5-C/SSL560Q.Seq.d/                        147   3e-34
AHG872 (AHG872Q) /CSM/AH/AHG8-C/AHG872Q.Seq.d/                        147   3e-34
SFI145 (SFI145Q) /CSM/SF/SFI1-B/SFI145Q.Seq.d/                         46   7e-04
VSH461 (VSH461Q) /CSM/VS/VSH4-C/VSH461Q.Seq.d/                         44   0.003
SSK153 (SSK153Q) /CSM/SS/SSK1-C/SSK153Q.Seq.d/                         44   0.003

Homology SHC248 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AF057019|AF057019.1 Dictyostelium discoideum interaptin (abp...   841   0.0    3
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 ma...    46   8e-12  13
AC116979|AC116979.3 Dictyostelium discoideum chromosome 2 ma...    38   7e-08  15
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma...    38   2e-06  14
BX842643|BX842643.1 Mycoplasma mycoides subsp. mycoides SC g...    40   8e-06  12
U42409|U42409.1 Dictyostelium discoideum myosin heavy chain ...    38   2e-05  6
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma...    42   4e-05  15
AE002141|AE002141.1 Ureaplasma parvum serovar 3 str. ATCC 70...    38   5e-05  4
CP000123|CP000123.1 Mycoplasma capricolum subsp. capricolum ...    46   6e-05  16
AC117076|AC117076.3 Dictyostelium discoideum chromosome 2 ma...    36   2e-04  8

Homology SHC248 vs Protein

Sequences producing significant alignments:                      (bits) Value


(O76329) RecName: Full=Interaptin; AltName: Full=Actin-binding p...   149   2e-34

Homology SHC248 vs Genome