Homology SHC248 vs DNA
Query= SHC248 (SHC248Q) /CSM/SH/SHC2-B/SHC248Q.Seq.d/
(728 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum22.seq; ddbjhum3.seq;
ddbjhum4.seq; ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq;
ddbjhum9.seq; /db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri1.seq;
ddbjpri2.seq; /db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq;
ddbjrod10.seq; ddbjrod11.seq; ddbjrod12.seq; ddbjrod13.seq;
ddbjrod14.seq; ddbjrod15.seq; ddbjrod16.seq; ddbjrod17.seq;
ddbjrod2.seq; ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq;
ddbjrod7.seq; ddbjrod8.seq; ddbjrod9.seq;
/db/DDBJNEW.DATA/b/new_ddbjrod.seq; ddbjmam1.seq; ddbjmam2.seq;
/db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; ddbjvrt4.seq; ddbjvrt5.seq; ddbjvrt6.seq; ddbjvrt7.seq;
ddbjvrt8.seq; /db/DDBJNEW.DATA/b/new_ddbjvrt.seq; ddbjinv1.seq;
ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq; ddbjinv6.seq;
/db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln10.seq;
ddbjpln11.seq; ddbjpln12.seq; ddbjpln13.seq; ddbjpln14.seq;
ddbjpln2.seq; ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq;
ddbjpln7.seq; ddbjpln8.seq; ddbjpln9.seq;
/db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq; ddbjbct2.seq;
ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq; ddbjbct7.seq;
ddbjbct8.seq; ddbjbct9.seq; /db/DDBJNEW.DATA/b/new_ddbjbct.seq;
ddbjvrl1.seq; ddbjvrl2.seq; ddbjvrl3.seq; ddbjvrl4.seq;
/db/DDBJNEW.DATA/b/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss100.seq; ddbjgss101.seq; ddbjgss102.seq; ddbjgss103.seq;
ddbjgss104.seq; ddbjgss105.seq; ddbjgss106.seq; ddbjgss107.seq;
ddbjgss108.seq; ddbjgss109.seq; ddbjgss11.seq; ddbjgss110.seq;
ddbjgss111.seq; ddbjgss112.seq; ddbjgss113.seq; ddbjgss114.seq;
ddbjgss115.seq; ddbjgss116.seq; ddbjgss117.seq; ddbjgss118.seq;
ddbjgss119.seq; ddbjgss12.seq; ddbjgss120.seq; ddbjgss13.seq;
ddbjgss14.seq; ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq;
ddbjgss18.seq; ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq;
ddbjgss21.seq; ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq;
ddbjgss25.seq; ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq;
ddbjgss29.seq; ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq;
ddbjgss32.seq; ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq;
ddbjgss36.seq; ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq;
ddbjgss4.seq; ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq;
ddbjgss43.seq; ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq;
ddbjgss47.seq; ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq;
ddbjgss50.seq; ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq;
ddbjgss54.seq; ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq;
ddbjgss58.seq; ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq;
ddbjgss61.seq; ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq;
ddbjgss65.seq; ddbjgss66.seq; ddbjgss67.seq; ddbjgss68.seq;
ddbjgss69.seq; ddbjgss7.seq; ddbjgss70.seq; ddbjgss71.seq;
ddbjgss72.seq; ddbjgss73.seq; ddbjgss74.seq; ddbjgss75.seq;
ddbjgss76.seq; ddbjgss77.seq; ddbjgss78.seq; ddbjgss79.seq;
ddbjgss8.seq; ddbjgss80.seq; ddbjgss81.seq; ddbjgss82.seq;
ddbjgss83.seq; ddbjgss84.seq; ddbjgss85.seq; ddbjgss86.seq;
ddbjgss87.seq; ddbjgss88.seq; ddbjgss89.seq; ddbjgss9.seq;
ddbjgss90.seq; ddbjgss91.seq; ddbjgss92.seq; ddbjgss93.seq;
ddbjgss94.seq; ddbjgss95.seq; ddbjgss96.seq; ddbjgss97.seq;
ddbjgss98.seq; ddbjgss99.seq; /db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss2.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss3.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg53.seq; ddbjhtg54.seq;
ddbjhtg55.seq; ddbjhtg56.seq; ddbjhtg57.seq; ddbjhtg6.seq;
ddbjhtg7.seq; ddbjhtg8.seq; ddbjhtg9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhtg1.seq;
/db/DDBJNEW.DATA/b/new_ddbjhtg2.seq;
/db/DDBJNEW.DATA/b/new_ddbjhtg3.seq; ddbjpat1.seq; ddbjpat10.seq;
ddbjpat11.seq; ddbjpat12.seq; ddbjpat13.seq; ddbjpat14.seq;
ddbjpat15.seq; ddbjpat16.seq; ddbjpat17.seq; ddbjpat18.seq;
ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq; ddbjpat6.seq;
ddbjpat7.seq; ddbjpat8.seq; ddbjpat9.seq;
/db/DDBJNEW.DATA/b/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts10.seq;
ddbjsts11.seq; ddbjsts12.seq; ddbjsts2.seq; ddbjsts3.seq;
ddbjsts4.seq; ddbjsts5.seq; ddbjsts6.seq; ddbjsts7.seq; ddbjsts8.seq;
ddbjsts9.seq; /db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq;
/db/DDBJNEW.DATA/b/new_est_cele1.seq; est_crei1.seq; est_cint1.seq;
/db/DDBJNEW.DATA/b/new_est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/b/new_est_drer1.seq; est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/b/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/b/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/b/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
/db/DDBJNEW.DATA/b/new_est_mous1.seq;
/db/DDBJNEW.DATA/b/new_est_mous2.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/b/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/b/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
est_rest3.seq; est_rest4.seq; est_rest5.seq; est_rest6.seq;
est_rest7.seq; est_rest8.seq; /db/DDBJNEW.DATA/b/new_est_rest1.seq;
/db/DDBJNEW.DATA/b/new_est_rest2.seq;
/db/DDBJNEW.DATA/b/new_est_rest3.seq
49,396,103 sequences; 55,021,534,442 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AF057019|AF057019.1 Dictyostelium discoideum interaptin (abp... 841 0.0 3
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 ma... 46 8e-12 13
AC116979|AC116979.3 Dictyostelium discoideum chromosome 2 ma... 38 7e-08 15
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma... 38 2e-06 14
BX842643|BX842643.1 Mycoplasma mycoides subsp. mycoides SC g... 40 8e-06 12
U42409|U42409.1 Dictyostelium discoideum myosin heavy chain ... 38 2e-05 6
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma... 42 4e-05 15
AE002141|AE002141.1 Ureaplasma parvum serovar 3 str. ATCC 70... 38 5e-05 4
CP000123|CP000123.1 Mycoplasma capricolum subsp. capricolum ... 46 6e-05 16
AC117076|AC117076.3 Dictyostelium discoideum chromosome 2 ma... 36 2e-04 8
BX842642|BX842642.1 Mycoplasma mycoides subsp. mycoides SC g... 46 2e-04 11
AC116977|AC116977.2 Dictyostelium discoideum chromosome 2 ma... 34 6e-04 14
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma... 36 7e-04 13
AC116963|AC116963.2 Dictyostelium discoideum chromosome 2 ma... 36 0.001 12
AC115607|AC115607.2 Dictyostelium discoideum chromosome 2 ma... 38 0.002 6
AC115592|AC115592.2 Dictyostelium discoideum chromosome 2 ma... 34 0.002 9
AE017243|AE017243.1 Mycoplasma hyopneumoniae J, complete gen... 46 0.006 15
AB102780|AB102780.1 Dictyostelium discoideum K4 mRNA for kin... 34 0.010 6
AE017308|AE017308.1 Mycoplasma mobile 163K complete genome. 34 0.010 16
AC117081|AC117081.2 Dictyostelium discoideum chromosome 2 ma... 34 0.014 12
CR962121|CR962121.2 Medicago truncatula chromosome 5 clone m... 42 0.014 6
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma... 30 0.017 13
AC115594|AC115594.2 Dictyostelium discoideum chromosome 2 ma... 36 0.024 4
AC116551|AC116551.2 Dictyostelium discoideum chromosome 2 ma... 32 0.024 8
AF063866|AF063866.1 Melanoplus sanguinipes entomopoxvirus, c... 38 0.027 8
AC116924|AC116924.3 Dictyostelium discoideum chromosome 2 ma... 38 0.033 8
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 ma... 40 0.043 8
AC005139|AC005139.3 Plasmodium falciparum chromosome 12, ***... 38 0.045 10
BA000026|BA000026.2 Mycoplasma penetrans HF-2 DNA, complete ... 46 0.046 15
AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 ma... 34 0.047 11
AC132154|AC132154.3 Homo sapiens BAC clone RP11-523J2 from 2... 48 0.050 5
BH981631|BH981631.1 odg53h01.b1 B.oleracea002 Brassica olera... 50 0.065 1
AC115612|AC115612.2 Dictyostelium discoideum chromosome 2 ma... 34 0.069 9
CS138460|CS138460.1 Sequence 156 from Patent EP1561821. 38 0.075 4
CS125451|CS125451.1 Sequence 1137 from Patent WO2005059172. 38 0.075 4
AF279293|AF279293.1 Mycoplasma hyopneumoniae strain J p76 me... 46 0.084 2
AC127401|AC127401.3 Rattus norvegicus clone CH230-195E24, WO... 38 0.086 6
AF279292|AF279292.1 Mycoplasma hyopneumoniae strain ISU 232 ... 46 0.097 2
AC155713|AC155713.14 Mus musculus 10 BAC RP24-117K18 (Roswel... 44 0.10 3
AF465306|AF465306.1 Dictyostelium discoideum ABC transporter... 46 0.11 3
AL844509|AL844509.1 Plasmodium falciparum chromosome 13. 40 0.12 14
AE016749|AE016749.1 Staphylococcus epidermidis ATCC 12228, s... 36 0.12 11
AE017244|AE017244.1 Mycoplasma hyopneumoniae 7448, complete ... 44 0.13 18
AQ989286|AQ989286.1 Gm_ISb001_003_D23R ISU Soybean BAC Libra... 36 0.15 3
AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 ma... 36 0.15 6
DT779035|DT779035.1 125247851 TH1 Tribolium castaneum cDNA c... 44 0.17 2
AC072028|AC072028.14 Homo sapiens 3 BAC RP11-190C21 (Roswell... 34 0.18 9
DT779213|DT779213.1 125652757 TH1 Tribolium castaneum cDNA c... 44 0.18 2
AC115680|AC115680.3 Dictyostelium discoideum chromosome 2 ma... 34 0.18 7
DT780521|DT780521.1 125260721 TH1 Tribolium castaneum cDNA c... 44 0.19 2
AF362371|AF362371.1 Dictyostelium discoideum histidine kinas... 40 0.19 4
CP000029|CP000029.1 Staphylococcus epidermidis RP62A, comple... 38 0.21 20
AC117070|AC117070.2 Dictyostelium discoideum chromosome 2 ma... 32 0.22 9
AE017263|AE017263.1 Mesoplasma florum L1 complete genome. 38 0.24 15
AC014158|AC014158.1 Drosophila melanogaster, *** SEQUENCING ... 42 0.24 3
CR855257|CR855257.3 Zebrafish DNA sequence *** SEQUENCING IN... 48 0.26 1
AC159854|AC159854.2 Bos taurus clone CH240-73C8, *** SEQUENC... 48 0.26 1
AC152881|AC152881.3 Bos taurus clone CH240-15D5, *** SEQUENC... 48 0.26 1
AC021294|AC021294.4 Homo sapiens clone RP11-23B13, WORKING D... 48 0.26 1
AC019120|AC019120.5 Homo sapiens chromosome 2 clone RP11-527... 48 0.26 1
AC016864|AC016864.4 Homo sapiens clone RP11-14M5, WORKING DR... 48 0.26 1
BH135161|BH135161.1 ENTNK15TF Entamoeba histolytica Sheared ... 48 0.26 1
AZ678543|AZ678543.1 ENTLU13TR Entamoeba histolytica Sheared ... 48 0.26 1
BX324166|BX324166.8 Zebrafish DNA sequence from clone DKEY-6... 48 0.26 1
AF279134|AF279134.1 Dictyostelium discoideum bifunctional gl... 38 0.26 3
AC123513|AC123513.1 Dictyostelium discoideum strain AX4 chro... 32 0.26 7
AC147107|AC147107.2 Mus musculus BAC clone RP24-69F17 from c... 40 0.27 4
AC168624|AC168624.2 Strongylocentrotus purpuratus clone R3-3... 32 0.28 9
AE016748|AE016748.1 Staphylococcus epidermidis ATCC 12228, s... 36 0.28 8
AE014832|AE014832.1 Plasmodium falciparum 3D7 chromosome 10 ... 32 0.29 11
AC147156|AC147156.2 Mus musculus BAC clone RP24-343M19 from ... 40 0.31 4
AZ682550|AZ682550.1 ENTMV82TR Entamoeba histolytica Sheared ... 32 0.32 3
AC152497|AC152497.20 Medicago truncatula clone mth2-36l14, W... 34 0.32 7
AC147109|AC147109.2 Mus musculus BAC clone RP24-75P8 from ch... 40 0.32 4
AL391995|AL391995.7 Human DNA sequence from clone RP11-522N4... 36 0.34 6
CO313423|CO313423.1 EK232914.5prime Exelixis FlyTag CK01 pCD... 36 0.35 3
AC114261|AC114261.2 Dictyostelium discoideum chromosome 2 ma... 36 0.42 6
AE017332|AE017332.1 Mycoplasma hyopneumoniae 232, complete g... 46 0.46 19
AC115599|AC115599.2 Dictyostelium discoideum chromosome 2 ma... 44 0.60 10
AC095349|AC095349.10 Homo sapiens 3 BAC RP11-714D16 (Roswell... 42 0.68 4
BH161042|BH161042.1 ENTSH69TF Entamoeba histolytica Sheared ... 40 0.70 2
BX005248|BX005248.13 Zebrafish DNA sequence from clone CH211... 44 0.71 4
AC116919|AC116919.2 Dictyostelium discoideum chromosome 2 ma... 30 0.72 6
DT789380|DT789380.1 126492093 TL1 Tribolium castaneum cDNA c... 44 0.73 2
AC117176|AC117176.2 Dictyostelium discoideum chromosome 2 ma... 32 0.74 12
BZ433320|BZ433320.1 BOOAO79TF BO_1.6_2_KB_tot Brassica olera... 38 0.79 3
AE016968|AE016968.1 Mycoplasma gallisepticum strain R sectio... 40 0.84 8
DT803568|DT803568.1 127291907 TL1 Tribolium castaneum cDNA c... 46 1.0 1
AW775606|AW775606.1 EST334671 DSIL Medicago truncatula cDNA ... 46 1.0 1
AP007390|AP007390.1 Lotus corniculatus var. japonicus genomi... 46 1.0 1
CL041287|CL041287.1 CH216-52G3_Sp6.1 CH216 Xenopus tropicali... 46 1.0 1
AJ313087|AJ313087.1 Mycoplasma mycoides subsp. mycoides SC t... 46 1.0 1
AF082927|AF082927.1 Mirax sp. cytochrome oxidase II gene, pa... 46 1.0 1
BX247871|BX247871.7 Zebrafish DNA sequence from clone CH211-... 46 1.0 1
AC017899|AC017899.1 Drosophila melanogaster, *** SEQUENCING ... 42 1.0 2
AC140493|AC140493.3 Mus musculus BAC clone RP24-137I9 from c... 40 1.0 5
BX005483|BX005483.3 Zebrafish DNA sequence from clone CH211-... 40 1.1 6
AL449929|AL449929.1 Streptococcus pneumoniae serotype 19F *... 32 1.2 5
AL646095|AL646095.27 Mouse DNA sequence from clone RP23-17P1... 40 1.2 7
CR932273|CR932273.1 Centrin-binding protein, complete Parame... 40 1.2 2
>AF057019|AF057019.1 Dictyostelium discoideum interaptin (abpD) gene,
complete cds.
Length = 8574
Score = 841 bits (424), Expect(3) = 0.0
Identities = 445/453 (98%)
Strand = Plus / Plus
Query: 29 ttgaaaaagagaatcaaattcaacaatngcaatcncaattaaatgaccaaagccaccacc 88
||||||||||||||||||||||||||| |||||| ||||||||||| ||||| || || |
Sbjct: 5462 ttgaaaaagagaatcaaattcaacaattgcaatcacaattaaatgaacaaagacaacaac 5521
Query: 89 aatcaaatcagttgtctgaaaaagatcaacaattgaatcaattaattgaaaagaatgaat 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5522 aatcaaatcagttgtctgaaaaagatcaacaattgaatcaattaattgaaaagaatgaat 5581
Query: 149 ctgatcaaaaagancaacaattaaaacaacaatcaattgaaaatgatttaattgaaaaag 208
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5582 ctgatcaaaaagaacaacaattaaaacaacaatcaattgaaaatgatttaattgaaaaag 5641
Query: 209 agaatcaaattcaacaattacaattacaattaaatgaacaaagacaactacaatctgaag 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5642 agaatcaaattcaacaattacaattacaattaaatgaacaaagacaactacaatctgaag 5701
Query: 269 tatcaattgataatgataaaattttagaattagaaaaacaattaaaacaatgtcaatcgg 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5702 tatcaattgataatgataaaattttagaattagaaaaacaattaaaacaatgtcaatcgg 5761
Query: 329 atttattgaaattaaatgatgaaaaacaacaacaagataaacaattacaagataaacaaa 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5762 atttattgaaattaaatgatgaaaaacaacaacaagataaacaattacaagataaacaaa 5821
Query: 389 ttggatttgatcaattacaattaacttttaatcaatttaaaaatgataaagattcacaat 448
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5822 ttgaatttgatcaattacaattaacttttaatcaatttaaaaatgataaagattcacaat 5881
Query: 449 tcattcaattacaagatgatcaaaaacaacaat 481
|||||||||||||||||||||||||||||||||
Sbjct: 5882 tcattcaattacaagatgatcaaaaacaacaat 5914
Score = 329 bits (166), Expect(7) = e-115
Identities = 217/235 (92%)
Strand = Plus / Plus
Query: 29 ttgaaaaagagaatcaaattcaacaatngcaatcncaattaaatgaccaaagccaccacc 88
||||||||||||||||||||||||||| ||||| ||||||||||| ||||| || || |
Sbjct: 5291 ttgaaaaagagaatcaaattcaacaattacaatcacaattaaatgaacaaagacaacaac 5350
Query: 89 aatcaaatcagttgtctgaaaaagatcaacaattgaatcaattaattgaaaagaatgaat 148
||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||
Sbjct: 5351 aatcaaatcagttatctgagaaagatcaacaattgaatcagttaattgaaaagaatcaat 5410
Query: 149 ctgatcaaaaagancaacaattaaaacaacaatcaattgaaaatgatttaattgaaaaag 208
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5411 ttgatcaaaaagaacaacaattaaaacaacaatcaattgaaaatgatttgtttgaaaaag 5470
Query: 209 agaatcaaattcaacaattacaattacaattaaatgaacaaagacaactacaatc 263
||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||
Sbjct: 5471 agaatcaaattcaacaattgcaatcacaattaaatgaacaaagacaacaacaatc 5525
Score = 250 bits (126), Expect(4) = 7e-86
Identities = 140/145 (96%)
Strand = Plus / Plus
Query: 119 aattgaatcaattaattgaaaagaatgaatctgatcaaaaagancaacaattaaaacaac 178
|||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct: 5210 aattaaatcaattaattgaaaagaatgaatctgatcataaagaacaacaattaaaacaac 5269
Query: 179 aatcaattgaaaatgatttaattgaaaaagagaatcaaattcaacaattacaattacaat 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5270 aatcaattgaaaatgatttaattgaaaaagagaatcaaattcaacaattacaatcacaat 5329
Query: 239 taaatgaacaaagacaactacaatc 263
|||||||||||||||||| ||||||
Sbjct: 5330 taaatgaacaaagacaacaacaatc 5354
Score = 147 bits (74), Expect(3) = 0.0
Identities = 77/78 (98%)
Strand = Plus / Plus
Query: 565 ttacaatcaattcaacttgagaatcaagaaaaagaaaaacaactctctgaaaaggatgaa 624
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5998 ttacaatcaattcaatttgagaatcaagaaaaagaaaaacaactctctgaaaaggatgaa 6057
Query: 625 aagttacaatcaattcaa 642
||||||||||||||||||
Sbjct: 6058 aagttacaatcaattcaa 6075
Score = 113 bits (57), Expect(7) = e-115
Identities = 57/57 (100%)
Strand = Plus / Plus
Query: 586 aatcaagaaaaagaaaaacaactctctgaaaaggatgaaaagttacaatcaattcaa 642
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6187 aatcaagaaaaagaaaaacaactctctgaaaaggatgaaaagttacaatcaattcaa 6243
Score = 105 bits (53), Expect(4) = 7e-86
Identities = 56/57 (98%)
Strand = Plus / Plus
Query: 586 aatcaagaaaaagaaaaacaactctctgaaaaggatgaaaagttacaatcaattcaa 642
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5956 aatcaagaaaaagaaaaacaactctctgaaaaggatgaaaaattacaatcaattcaa 6012
Score = 67.9 bits (34), Expect(7) = 4e-17
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 29 ttgaaaaagagaatcaaattcaacaatngcaatcncaattaaatgaccaaag 80
||||||||||||||||||||||||||| |||| ||||||||||| |||||
Sbjct: 5633 ttgaaaaagagaatcaaattcaacaattacaattacaattaaatgaacaaag 5684
Score = 65.9 bits (33), Expect(6) = 2e-17
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 586 aatcaagaaaaagaaaaacaactctctgaaaaggatgaaaagttacaatcaattcaa 642
||||||||||||| ||||||| | |||||||| || |||||| ||||||||||||||
Sbjct: 6103 aatcaagaaaaagtaaaacaattttctgaaaaagacgaaaagctacaatcaattcaa 6159
Score = 54.0 bits (27), Expect(8) = 7e-16
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 186 tgaaaatgatttaattgaaaaagagaatcaa 216
|||||||||||||||||||||||| ||||||
Sbjct: 5160 tgaaaatgatttaattgaaaaagaaaatcaa 5190
Score = 40.1 bits (20), Expect(6) = 2e-17
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 196 ttaattgaaaaagagaatcaaattcaacaattacaa 231
|||||||||||||| || ||| | ||||||||||||
Sbjct: 4753 ttaattgaaaaagaaaaacaattacaacaattacaa 4788
Score = 38.2 bits (19), Expect(6) = 2e-17
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 301 gaaaaacaattaaaacaat 319
|||||||||||||||||||
Sbjct: 4852 gaaaaacaattaaaacaat 4870
Score = 34.2 bits (17), Expect(3) = 0.0
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 11 atcaattgaaaatgatt 27
|||||||||||||||||
Sbjct: 5271 atcaattgaaaatgatt 5287
Score = 34.2 bits (17), Expect(7) = 4e-17
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 11 atcaattgaaaatgatt 27
|||||||||||||||||
Sbjct: 5442 atcaattgaaaatgatt 5458
Score = 34.2 bits (17), Expect(4) = 1.5
Identities = 17/17 (100%)
Strand = Plus / Plus
Query: 11 atcaattgaaaatgatt 27
|||||||||||||||||
Sbjct: 5613 atcaattgaaaatgatt 5629
Score = 34.2 bits (17), Expect(8) = 7e-16
Identities = 32/37 (86%)
Strand = Plus / Plus
Query: 338 aattaaatgatgaaaaacaacaacaagataaacaatt 374
|||||||||||||||| ||| || ||| ||||||||
Sbjct: 6089 aattaaatgatgaaaatcaagaaaaagtaaaacaatt 6125
Score = 32.2 bits (16), Expect(4) = 5.0
Identities = 19/20 (95%)
Strand = Plus / Plus
Query: 300 agaaaaacaattaaaacaat 319
||||||||||||| ||||||
Sbjct: 4764 agaaaaacaattacaacaat 4783
Score = 32.2 bits (16), Expect(5) = 0.10
Identities = 37/44 (84%)
Strand = Plus / Plus
Query: 118 caattgaatcaattaattgaaaagaatgaatctgatcaaaaaga 161
||||| |||||| ||||||||||| | ||| ||||||| ||||
Sbjct: 4996 caattaaatcaacaaattgaaaagattcaatttgatcaacaaga 5039
Score = 32.2 bits (16), Expect(7) = e-115
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 565 ttacaatcaattcaac 580
||||||||||||||||
Sbjct: 6061 ttacaatcaattcaac 6076
Score = 32.2 bits (16), Expect(8) = 7e-16
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 565 ttacaatcaattcaac 580
||||||||||||||||
Sbjct: 6229 ttacaatcaattcaac 6244
Score = 30.2 bits (15), Expect(8) = 7e-16
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 178 caatcaattgaaaat 192
|||||||||||||||
Sbjct: 4906 caatcaattgaaaat 4920
Score = 30.2 bits (15), Expect(5) = 0.10
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 166 caattaaaacaacaa 180
|||||||||||||||
Sbjct: 5122 caattaaaacaacaa 5136
Score = 30.2 bits (15), Expect(8) = 7e-16
Identities = 18/19 (94%)
Strand = Plus / Plus
Query: 300 agaaaaacaattaaaacaa 318
|||| ||||||||||||||
Sbjct: 5250 agaacaacaattaaaacaa 5268
Score = 30.2 bits (15), Expect(4) = 7e-86
Identities = 18/19 (94%)
Strand = Plus / Plus
Query: 300 agaaaaacaattaaaacaa 318
|||| ||||||||||||||
Sbjct: 5421 agaacaacaattaaaacaa 5439
Score = 30.2 bits (15), Expect(7) = e-115
Identities = 18/19 (94%)
Strand = Plus / Plus
Query: 300 agaaaaacaattaaaacaa 318
|||| ||||||||||||||
Sbjct: 5592 agaacaacaattaaaacaa 5610
Score = 30.2 bits (15), Expect(4) = 5.0
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 566 tacaatcaattcaac 580
|||||||||||||||
Sbjct: 6146 tacaatcaattcaac 6160
Score = 30.2 bits (15), Expect(4) = 1.5
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 163 caacaattaaaacaa 177
|||||||||||||||
Sbjct: 6352 caacaattaaaacaa 6366
Score = 30.2 bits (15), Expect(7) = 4e-17
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 305 aacaattaaaacaat 319
|||||||||||||||
Sbjct: 6353 aacaattaaaacaat 6367
Score = 30.2 bits (15), Expect(7) = 4e-17
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 428 aaaatgataaagatt 442
|||||||||||||||
Sbjct: 6932 aaaatgataaagatt 6946
Score = 28.2 bits (14), Expect(6) = 2e-17
Identities = 17/18 (94%)
Strand = Plus / Plus
Query: 177 acaatcaattgaaaatga 194
||||||||||||| ||||
Sbjct: 4617 acaatcaattgaagatga 4634
Score = 28.2 bits (14), Expect(4) = 5.0
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 219 tcaacaattacaat 232
||||||||||||||
Sbjct: 4683 tcaacaattacaat 4696
Score = 28.2 bits (14), Expect(8) = 7e-16
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 164 aacaattaaaacaa 177
||||||||||||||
Sbjct: 4856 aacaattaaaacaa 4869
Score = 28.2 bits (14), Expect(7) = 4e-17
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 164 aacaattaaaacaa 177
||||||||||||||
Sbjct: 5738 aacaattaaaacaa 5751
Score = 28.2 bits (14), Expect(5) = 0.10
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 305 aacaattaaaacaa 318
||||||||||||||
Sbjct: 6404 aacaattaaaacaa 6417
Score = 28.2 bits (14), Expect(4) = 1.5
Identities = 17/18 (94%)
Strand = Plus / Plus
Query: 173 aacaacaatcaattgaaa 190
|||||||||||| |||||
Sbjct: 6446 aacaacaatcaaatgaaa 6463
Score = 28.2 bits (14), Expect(7) = 4e-17
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 352 aaacaacaacaaga 365
||||||||||||||
Sbjct: 6571 aaacaacaacaaga 6584
Score = 28.2 bits (14), Expect(5) = 0.10
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 350 aaaaacaacaacaa 363
||||||||||||||
Sbjct: 7052 aaaaacaacaacaa 7065
Score = 26.3 bits (13), Expect(8) = 7e-16
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 128 aattaattgaaaa 140
|||||||||||||
Sbjct: 4751 aattaattgaaaa 4763
Score = 26.3 bits (13), Expect(7) = e-115
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 11 atcaattgaaaat 23
|||||||||||||
Sbjct: 4908 atcaattgaaaat 4920
Score = 26.3 bits (13), Expect(6) = 2e-17
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 342 aaatgatgaaaaa 354
|||||||||||||
Sbjct: 5145 aaatgatgaaaaa 5157
Score = 26.3 bits (13), Expect(5) = 0.10
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 222 acaattacaatta 234
|||||||||||||
Sbjct: 5661 acaattacaatta 5673
Score = 26.3 bits (13), Expect(7) = e-115
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 400 caattacaattaa 412
|||||||||||||
Sbjct: 5662 caattacaattaa 5674
Score = 26.3 bits (13), Expect(7) = e-115
Identities = 16/17 (94%)
Strand = Plus / Plus
Query: 464 atgatcaaaaacaacaa 480
||||| |||||||||||
Sbjct: 5777 atgatgaaaaacaacaa 5793
Score = 26.3 bits (13), Expect(4) = 5.0
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 375 acaagataaacaa 387
|||||||||||||
Sbjct: 5793 acaagataaacaa 5805
Score = 26.3 bits (13), Expect(6) = 2e-17
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 360 acaagataaacaa 372
|||||||||||||
Sbjct: 5808 acaagataaacaa 5820
Score = 26.3 bits (13), Expect(4) = 7e-86
Identities = 16/17 (94%)
Strand = Plus / Plus
Query: 344 atgatgaaaaacaacaa 360
||||| |||||||||||
Sbjct: 5897 atgatcaaaaacaacaa 5913
Score = 26.3 bits (13), Expect(7) = 4e-17
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 220 caacaattacaat 232
|||||||||||||
Sbjct: 5908 caacaattacaat 5920
Score = 26.3 bits (13), Expect(8) = 7e-16
Identities = 16/17 (94%)
Strand = Plus / Plus
Query: 590 aagaaaaagaaaaacaa 606
||||||||||| |||||
Sbjct: 6296 aagaaaaagaagaacaa 6312
Score = 26.3 bits (13), Expect(4) = 1.5
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 351 aaaacaacaacaa 363
|||||||||||||
Sbjct: 6492 aaaacaacaacaa 6504
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 38,319,965
Number of Sequences: 49396103
Number of extensions: 38319965
Number of successful extensions: 3882660
Number of sequences better than 10.0: 1121
length of query: 728
length of database: 55,021,534,442
effective HSP length: 23
effective length of query: 705
effective length of database: 53,885,424,073
effective search space: 37989223971465
effective search space used: 37989223971465
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home