Dictyostelium discoideum cDNA Clone SHC243

Sequence SHC243

ATCTATTTAA TAAAAATTAA ATTTTCCTAA AATAATTAAA TTTCTCTTTT
TTAATTTTCT TTTATAAAAA TTATTAAAAA GCCAAATTCA AAATAAAAAA
AATCATTGAT AAAAATGGAA AAGAAAATAA TATTACTGAT TTTATTTTTG
TTCTTTATAT CAGGATATTC AATGAATCCT CCAACACCAA TAGATGCAAT
ATATGATGAT AAATCATTTA CATTAATTTT TAATAGTAAT CTCCCATATT
CTACCCGTTT AATTTTGTAT AAAAACGAAA AAGAACCCAG AACTGAAATG
GCACCAAATT ATTTCAATTG TTCTCTAGTT GATGGAGAGA GACATTGTTT
ATTCCATTCA GATGAACCAT TCTCAAGATT ATGGGGTAGT ATAGACAGTA
AGGTATGTGT TAGAGATAAA TCAAATACTG TTGAGGATTG TACATTTGAT
GCTTCGGGTT TAGTATATTA TCCAAAAGTA TACAATTTGA AATATAGTAA
AAAACCAAAA ACATCTGGTG AAGATATAGT CATTACTGGC TCATATTTAA
GATTATTTGG TGGTCCTAAT TTCCTTATTA ATTCCATTGA TGTAAATAAA
CCTTTTGTTG TTAAAGGTAA TTTCTCTGAT CCATCTTTTG ACTGT-----
-----ACAAA GAATTCAAAG TTAATGTAAA ATCAAATAAT AAAAATACCA
CAGTATTTGC TCAAGATGAA AAGATATTAA TAGTTAGAGA TGAAAGTAGA
GAGAGTTCAC TCTTTGTTAC AACATTCATT GGAGTTCGTT CAGGACCAAG
TACAACATTG ACCTATATAA AACCAATGAT TTCAGAAATT CCAACCATTG
AAAATAAAAT TGAAAAAGGT ATTTTAGCAA TAATTCGTGG TTATAGTTTT
ACAGATATTC TCAATGCAAG CTTAACAGTT TCATCAGAAA CTGTTCCTCT
TTCATGTAAT TTAGAATGTA GTTTATCACC AAATGAAATA CTTGATGATA
GTGATTCAAG TGAAACTAAT ATTACAAATA GTAATACTGA TTGTTTATCA
TGCCATTCCG GTTCAAGTGT GAAAAATACA TCAGGAGTAT TATATCTCCT
ATTTAACTCA ACATCATTTC AATATAATGT CACAATTGAA GAAATTAAAT
TATCTCCATC ACCAAACGTT AGTCAAAGAG ATGTTGAAAC TAAATCATCC
AAACCATCAA ATGGTTTAAT AATAGGTTCT ACAATTGGTA GTGTTGGTGG
TGCTCTTGCT ATCGGTGCTC TTGCCTATTA CTTTAAAATA CCTTTTCGTG
TGAAAAAATT TATAGGTAAA AAATTTTAAA AAAAAATGTA AATTTAAAAT
CACAAATCAC ATATGTGTAA AATTAAAACT TAAC

Translated Amino Acid Sequence SHC243

iylikikfs*nn*islf*fsfikiikkpnsk*KKSLIKMEKKIILLILFLFFISGYSMNP
PTPIDAIYDDKSFTLIFNSNLPYSTRLILYKNEKEPRTEMAPNYFNCSLVDGERHCLFHS
DEPFSRLWGSIDSKVCVRDKSNTVEDCTFDASGLVYYPKVYNLKYSKKPKTSGEDIVITG
SYLRLFGGPNFLINSIDVNKPFVVKGNFSDPSFDC---

---KEFKVNVKSNNKNTTVFAQDEKILIVRDESRESSLFVTTFIGVRSGPSTTLTYIKPM
ISEIPTIENKIEKGILAIIRGYSFTDILNASLTVSSETVPLSCNLECSLSPNEILDDSDS
SETNITNSNTDCLSCHSGSSVKNTSGVLYLLFNSTSFQYNVTIEEIKLSPSPNVSQRDVE
TKSSKPSNGLIIGSTIGSVGGALAIGALAYYFKIPFRVKKFIGKKF*kkm*i*nhkshmc
kikt*

Homology SHC243 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SHC243 (SHC243Q) /CSM/SH/SHC2-B/SHC243Q.Seq.d/                       1509   0.0
SHD571 (SHD571Q) /CSM/SH/SHD5-C/SHD571Q.Seq.d/                       1279   0.0
CHG218 (CHG218Q) /CSM/CH/CHG2-A/CHG218Q.Seq.d/                       1279   0.0
AHQ216 (AHQ216Q) /CSM/AH/AHQ2-A/AHQ216Q.Seq.d/                       1279   0.0
AHP270 (AHP270Q) /CSM/AH/AHP2-C/AHP270Q.Seq.d/                       1279   0.0
AHO612 (AHO612Q) /CSM/AH/AHO6-A/AHO612Q.Seq.d/                       1279   0.0
AHO174 (AHO174Q) /CSM/AH/AHO1-D/AHO174Q.Seq.d/                       1279   0.0
AHM883 (AHM883Q) /CSM/AH/AHM8-D/AHM883Q.Seq.d/                       1279   0.0
AHM102 (AHM102Q) /CSM/AH/AHM1-A/AHM102Q.Seq.d/                       1279   0.0
AHL692 (AHL692Q) /CSM/AH/AHL6-D/AHL692Q.Seq.d/                       1279   0.0

Homology SHC243 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


U09478|U09478.1 Dictyostelium discoideum KAx-3 LagC protein ...  1283   0.0    1
AF258615|AF258615.1 Dictyostelium discoideum LagC protein (l...  1283   0.0    1
AB032076|AB032076.1 Dictyostelium discoideum mRNA for lagC2,...    80   1e-37  8
AC116982|AC116982.2 Dictyostelium discoideum chromosome 2 ma...    46   9e-04  2
AF063866|AF063866.1 Melanoplus sanguinipes entomopoxvirus, c...    34   0.071  11
AC146777|AC146777.27 Medicago truncatula clone mth2-173c10, ...    36   0.11   7
AC094308|AC094308.10 Rattus norvegicus clone CH230-3G2, *** ...    50   0.13   1
BX957222|BX957222.1 Methanococcus maripaludis S2 complete ge...    34   0.27   10
CT025578|CT025578.5 Zebrafish DNA sequence *** SEQUENCING IN...    36   0.27   2
CT573049|CT573049.1 Zebrafish DNA sequence *** SEQUENCING IN...    36   0.27   2

Homology SHC243 vs Protein

Sequences producing significant alignments:                      (bits) Value


A54280(A54280) cell differentiation protein LagC precursor - sli...   358   4e-97
FJ374927_1(FJ374927|pid:none) Dictyostelium discoideum strain QS...   349   2e-94
FJ374925_1(FJ374925|pid:none) Dictyostelium discoideum strain QS...   349   2e-94
FJ374948_1(FJ374948|pid:none) Dictyostelium discoideum strain QS...   349   2e-94
FJ374933_1(FJ374933|pid:none) Dictyostelium discoideum strain QS...   349   2e-94
FJ374923_1(FJ374923|pid:none) Dictyostelium discoideum strain QS...   349   2e-94
FJ374941_1(FJ374941|pid:none) Dictyostelium discoideum strain QS...   348   6e-94
FJ374928_1(FJ374928|pid:none) Dictyostelium discoideum strain QS...   333   1e-89
FJ374930_1(FJ374930|pid:none) Dictyostelium discoideum strain QS...   333   1e-89
FJ374951_1(FJ374951|pid:none) Dictyostelium discoideum strain QS...   333   1e-89

Homology SHC243 vs Genome