Homology SHC204 vs Protein

Query= SHC204 (SHC204Q) /CSM/SH/SHC2-A/SHC204Q.Seq.d/
         (1304 letters)

Database: nrp_B
           5,349,213 sequences; 1,732,582,204 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116100_9(AC116100|pid:none) Dictyostelium discoideum chromosom...   144   1e-32
AC116984_63(AC116984|pid:none) Dictyostelium discoideum chromoso...   142   4e-32
AC115612_9(AC115612|pid:none) Dictyostelium discoideum chromosom...   139   5e-31
AC116984_70(AC116984|pid:none) Dictyostelium discoideum chromoso...   138   8e-31
AC115680_4(AC115680|pid:none) Dictyostelium discoideum chromosom...   136   2e-30
AC116984_134(AC116984|pid:none) Dictyostelium discoideum chromos...   136   3e-30
AC117075_93(AC117075|pid:none) Dictyostelium discoideum chromoso...   119   5e-25
AC116984_67(AC116984|pid:none) Dictyostelium discoideum chromoso...   118   9e-25
AC116957_18(AC116957|pid:none) Dictyostelium discoideum chromoso...   115   7e-24
AC116924_8(AC116924|pid:none) Dictyostelium discoideum chromosom...   111   8e-23
AC117072_39(AC117072|pid:none) Dictyostelium discoideum chromoso...   103   2e-20
AC116957_52(AC116957|pid:none) Dictyostelium discoideum chromoso...   101   8e-20
AC117075_65(AC117075|pid:none) Dictyostelium discoideum chromoso...    66   5e-09
AC116963_25(AC116963|pid:none) Dictyostelium discoideum chromoso...    65   1e-08
AC116920_25(AC116920|pid:none) Dictyostelium discoideum chromoso...    64   1e-08
AC116920_24(AC116920|pid:none) Dictyostelium discoideum chromoso...    64   2e-08
AC116920_20(AC116920|pid:none) Dictyostelium discoideum chromoso...    63   3e-08
AC117081_39(AC117081|pid:none) Dictyostelium discoideum chromoso...    63   4e-08
AC116982_41(AC116982|pid:none) Dictyostelium discoideum chromoso...    62   9e-08
AC117081_43(AC117081|pid:none) Dictyostelium discoideum chromoso...    61   2e-07
AC116956_34(AC116956|pid:none) Dictyostelium discoideum chromoso...    60   3e-07
AC117075_64(AC117075|pid:none) Dictyostelium discoideum chromoso...    60   3e-07
AC116963_42(AC116963|pid:none) Dictyostelium discoideum chromoso...    56   4e-06
AC116960_61(AC116960|pid:none) Dictyostelium discoideum chromoso...    54   2e-05
AC117075_41(AC117075|pid:none) Dictyostelium discoideum chromoso...    53   3e-05
(Q54KP9) RecName: Full=Putative uncharacterized protein DDB_G028...    53   4e-05
AC116967_8(AC116967|pid:none) Dictyostelium discoideum chromosom...    51   2e-04
AC116967_7(AC116967|pid:none) Dictyostelium discoideum chromosom...    50   3e-04
CP002304_250(CP002304|pid:none) Halanaerobium hydrogeniformans, ...    36   5.6
CP001998_1908(CP001998|pid:none) Coraliomargarita akajimensis DS...    35   9.5

>AC116100_9(AC116100|pid:none) Dictyostelium discoideum chromosome 2
            map 6163571-6199719 strain AX4, complete sequence.
          Length = 909

 Score =  144 bits (362), Expect = 1e-32
 Identities = 77/185 (41%), Positives = 113/185 (61%), Gaps = 1/185 (0%)
 Frame = +2

Query: 566  NGSMTPISVEIEYFENERKIEFAGQEIIMKPSSIKYTIYIDQYPFSTKLSQLQLXXXXXX 745
            N S T ISV +E+FE+   I FA + +IM PSSIKYTI I +Y FS+KL+QLQL
Sbjct: 683  NESETNISVTLEWFESLTNITFANENLIMNPSSIKYTIEISKYKFSSKLNQLQLVMMAEL 742

Query: 746  XXXXXXXXCSNKEFDNTTS-ESSDYVKLSISGKSLYGRFIRRALVDSTPITISNELLDKS 922
                    CSN EF  T+S ++S+Y+K+ +   SLYGRFI+RA++DS P  I N  LD++
Sbjct: 743  SSNKTKDLCSNNEFGETSSGDNSNYIKIQVDNHSLYGRFIKRAIIDSVPRAIGNVQLDET 802

Query: 923  LGAISDSHTSQSFIGINIPIYNKNVKIDPDFSLILXXXXXXXXXXXXICSAKSTKSKSGL 1102
            +  + ++ +SQS+IGI +P + K++ IDPDFS+++                   +  SGL
Sbjct: 803  MRPLKNASSSQSYIGIVVPYFEKSIIIDPDFSVLIDSSKLESNSNSNSICLIQDQLISGL 862

Query: 1103 TTAQL 1117
            T +Q+
Sbjct: 863  TKSQI 867

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 2,227,611,832
Number of extensions: 34166072
Number of successful extensions: 78140
Number of sequences better than 10.0: 30
Number of HSP's gapped: 78077
Number of HSP's successfully gapped: 32
Length of query: 434
Length of database: 1,732,582,204
Length adjustment: 135
Effective length of query: 299
Effective length of database: 1,010,438,449
Effective search space: 302121096251
Effective search space used: 302121096251
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)




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