Dictyostelium discoideum cDNA Clone SHB522

Sequence SHB522

CTGTTGGCCT ACTGGTTTTA ATTTTGCAGG TGATGATGAT GTTTGGGTAT
TTATTAATAA TATTTTGGTT GTGGATTTGG GAGGTATTCA TACAATTGCA
AGTGCAAGTG TTAACTTGGA TTTATTGGGT TTAACACCTG GNCAAAATTA
TCCATTTGAT TTCTTTTATT GTGAACGTCA CACTGTAGAA TCTCATATAA
GAATTGAAAC ATCTTTGGCA TTCAAGTGTC CTCGATATGA TGAATGTGGT
GTCTGTGAAG GTGATGGTAC TTCTTGTTGT ACTCCAAATA ATTGTGATAA
TAATCCAATT TATAGAACCA ACTGTATAAC AGCAAAATGT TCAAATAATG
TTTGCGTTAC TTCAGCACCA TATTGCAGTT CAACCGAACC ATGTACAGTT
GGTCTTTGTA CACCAGGTGT TGGTTGTTCA GTTGTTCCAA AAAATTGTGT
AAATGAAAAT CATTGTACCC AAGATTCATG TAATTCAACT ATAAATGCTT
GCCAACATGA TCCAATTCCA GATTGTATCA ATTGTGCCTA TATTGGTTGT
ATCACTACTG ATTATTGTAA TGAACAAGTA TGTTCAGCTG ATGGAAGATC
ATGTGAAACT AG-------- --CCATCAGA TGATGCATGT AATTTACAAG
TATGTTCTGA AACTGGAGAT AGTTGTCTTA CAATGGTTTT AAATTGTGAT
GATAATAACG ATTGTACTGA AGATAAGTGT TTAAATACTG GTATTTGTCA
AAATAATCCA ATTGACGGTT GTGTTACACC ATCACCAGTT TCAATTGGTG
GAACTATCCC TCCAACCACT ACTGGTGTAT CACAAGTTGA GTGTGATTGT
TGTCCAATTG GTCAAAAATG TTTATTAGTC AATGGTCATG AAATTTGTAT
TAAACCAGCA ACCACTGGTG GTATTCCAGA ATTAACTACT GGTTGTGCTG
GTACAACAAC TGGCAGGGCT ACAGGTCATT ACACAGAATC AGGTACAGGT
AATCCACATT TATGTGATAG ATATCATTGT AAAAGAGGAA TGGAATGTCA
TGTTGTTAAT GGTGTTCCAG AATGTTTACC ATCAAACTAC AAATGTTTAG
ATTGTTTAGA TCTTCATTGT GAGAGACAAG GTGATTTCAC CTGTTTTATG
GTTAAAAATC CAAATTTCAT TTCTAGTAAA CATAGTTGTT ATGGTGAATC
ATGTTGTAAA TTCACACCAG TTTGCAAACC AAAAGGACAC TCACTTTAAA
AAAAACTAAA ATTAATATAT TATTTCTTTT CTTTTTATTA TATATTTTTA
TTAAAATTTT ATAACCAAGT CAACAATTTC AATT

Translated Amino Acid Sequence SHB522

CWPTGFNFAGDDDVWVFINNILVVDLGGIHTIASASVNLDLLGLTPGQNYPFDFFYCERH
TVESHIRIETSLAFKCPRYDECGVCEGDGTSCCTPNNCDNNPIYRTNCITAKCSNNVCVT
SAPYCSSTEPCTVGLCTPGVGCSVVPKNCVNENHCTQDSCNSTINACQHDPIPDCINCAY
IGCITTDYCNEQVCSADGRSCET---

---PSDDACNLQVCSETGDSCLTMVLNCDDNNDCTEDKCLNTGICQNNPIDGCVTPSPVS
IGGTIPPTTTGVSQVECDCCPIGQKCLLVNGHEICIKPATTGGIPELTTGCAGTTTGRAT
GHYTESGTGNPHLCDRYHCKRGMECHVVNGVPECLPSNYKCLDCLDLHCERQGDFTCFMV
KNPNFISSKHSCYGESCCKFTPVCKPKGHSL*kklkliyyffsfyyifllkfynqvnnfn

Homology SHB522 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SHB522 (SHB522Q) /CSM/SH/SHB5-A/SHB522Q.Seq.d/                       2407   0.0
SHJ886 (SHJ886Q) /CSM/SH/SHJ8-D/SHJ886Q.Seq.d/                       1239   0.0
SHF242 (SHF242Q) /CSM/SH/SHF2-B/SHF242Q.Seq.d/                       1239   0.0
SHB423 (SHB423Q) /CSM/SH/SHB4-A/SHB423Q.Seq.d/                       1239   0.0
SHA693 (SHA693Q) /CSM/SH/SHA6-D/SHA693Q.Seq.d/                       1239   0.0
CHG220 (CHG220Q) /CSM/CH/CHG2-A/CHG220Q.Seq.d/                       1239   0.0
AHE486 (AHE486Q) /CSM/AH/AHE4-D/AHE486Q.Seq.d/                       1239   0.0
AHB727 (AHB727Q) /CSM/AH/AHB7-B/AHB727Q.Seq.d/                       1239   0.0
AFO452 (AFO452Q) /CSM/AF/AFO4-C/AFO452Q.Seq.d/                       1239   0.0
SHG326 (SHG326Q) /CSM/SH/SHG3-B/SHG326Q.Seq.d/                       1237   0.0

Homology SHB522 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC115684|AC115684.2 Dictyostelium discoideum chromosome 2 ma...    66   8e-12  7
U67940|U67940.1 Dictyostelium discoideum ORFveg106 mRNA, com...    60   8e-11  4
AB053203|AB053203.1 Dictyostelium discoideum psiA mRNA for P...    56   1e-07  2
AJ548837|AJ548837.1 Dictyostelium discoideum mRNA for extrac...    54   0.002  2
AJ548838|AJ548838.1 Dictyostelium discoideum dicA gene for e...    54   0.002  2
CJ451421|CJ451421.1 Macaca fascicularis mRNA, clone: QflA-17...    52   0.003  2
CJ467941|CJ467941.1 Macaca fascicularis mRNA, clone: QnpA-17...    48   0.48   1
AX251444|AX251444.1 Sequence 412 from Patent WO0168912.            38   1.1    2
BD452965|BD452965.1 Diagnosis of Diseases Associated with tu...    38   1.1    2
AL359090|AL359090.15 Human DNA sequence from clone RP11-69P2...    42   1.9    2

Homology SHB522 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54C31) RecName: Full=Protein psiR; Flags: Precursor;                469   e-130
(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor;                287   8e-76
(Q1ZXC5) RecName: Full=Protein psiC; Flags: Precursor;                197   9e-49
(Q54FD8) RecName: Full=Protein psiD; Flags: Precursor;                189   3e-46
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor;                168   6e-40
(Q55FQ4) RecName: Full=Protein psiB; Flags: Precursor;                154   1e-35
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor;                154   1e-35
(Q94494) RecName: Full=Protein psiH; Flags: Precursor;  &U67940_...   153   2e-35
(Q968Z6) RecName: Full=Protein psiA; AltName: Full=Prespore-cell...   143   2e-32
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor;                139   5e-31

Homology SHB522 vs Genome