Homology SFI489 vs DNA
Query= SFI489 (SFI489Q) /CSM/SF/SFI4-D/SFI489Q.Seq.d/
(746 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; ddbjrod9.seq; /db/DDBJNEW.DATA/b/new_ddbjrod.seq;
ddbjmam.seq; /db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq;
ddbjvrt2.seq; ddbjvrt3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrt.seq;
ddbjinv1.seq; ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
ddbjbct7.seq; /db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq;
ddbjvrl2.seq; ddbjvrl3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrl.seq;
ddbjphg.seq; /db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
ddbjgss1.seq; ddbjgss10.seq; ddbjgss11.seq; ddbjgss12.seq;
ddbjgss13.seq; ddbjgss14.seq; ddbjgss15.seq; ddbjgss16.seq;
ddbjgss17.seq; ddbjgss18.seq; ddbjgss19.seq; ddbjgss2.seq;
ddbjgss20.seq; ddbjgss21.seq; ddbjgss22.seq; ddbjgss23.seq;
ddbjgss24.seq; ddbjgss25.seq; ddbjgss26.seq; ddbjgss27.seq;
ddbjgss28.seq; ddbjgss29.seq; ddbjgss3.seq; ddbjgss30.seq;
ddbjgss31.seq; ddbjgss32.seq; ddbjgss33.seq; ddbjgss34.seq;
ddbjgss35.seq; ddbjgss36.seq; ddbjgss37.seq; ddbjgss38.seq;
ddbjgss39.seq; ddbjgss4.seq; ddbjgss40.seq; ddbjgss41.seq;
ddbjgss42.seq; ddbjgss43.seq; ddbjgss44.seq; ddbjgss45.seq;
ddbjgss46.seq; ddbjgss47.seq; ddbjgss48.seq; ddbjgss49.seq;
ddbjgss5.seq; ddbjgss50.seq; ddbjgss51.seq; ddbjgss52.seq;
ddbjgss53.seq; ddbjgss54.seq; ddbjgss55.seq; ddbjgss56.seq;
ddbjgss57.seq; ddbjgss58.seq; ddbjgss59.seq; ddbjgss6.seq;
ddbjgss60.seq; ddbjgss61.seq; ddbjgss62.seq; ddbjgss63.seq;
ddbjgss64.seq; ddbjgss65.seq; ddbjgss66.seq; ddbjgss67.seq;
ddbjgss68.seq; ddbjgss69.seq; ddbjgss7.seq; ddbjgss70.seq;
ddbjgss71.seq; ddbjgss72.seq; ddbjgss73.seq; ddbjgss74.seq;
ddbjgss75.seq; ddbjgss8.seq; ddbjgss9.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss1.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg6.seq; ddbjhtg7.seq; ddbjhtg8.seq; ddbjhtg9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhtg1.seq; ddbjpat1.seq; ddbjpat2.seq;
ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq; ddbjpat6.seq; ddbjpat7.seq;
ddbjpat8.seq; ddbjpat9.seq; /db/DDBJNEW.DATA/b/new_ddbjpat.seq;
ddbjsts1.seq; ddbjsts2.seq; ddbjsts3.seq;
/db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_btra1.seq; est_cele1.seq;
est_crei1.seq; est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/b/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/b/new_est_hum1.seq;
est_hvul1.seq; est_lesc1.seq; /db/DDBJNEW.DATA/b/new_est_lesc1.seq;
est_mous1.seq; est_mous2.seq; est_mous3.seq;
/db/DDBJNEW.DATA/b/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/b/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/b/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
est_rest3.seq; /db/DDBJNEW.DATA/b/new_est_rest1.seq
30,946,621 sequences; T,471,040,602 total letters
Searching..............................................................done
Score E
Sequences producing significant alignments: (bits) Value N
Y00145|Y00145.1 Dictyostelium discoideum UDP glucose pyropho... 841 0.0 4
AF150929|AF150929.1 Dictyostelium discoideum UDP-glucose pyr... 50 7e-05 3
AL445565|AL445565.1 Mycoplasma pulmonis (strain UAB CTIP) co... 36 1e-04 17
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma... 34 4e-04 19
AR271569|AR271569.1 Sequence 1 from patent US 6503729. 34 0.001 29
BX572093|BX572093.1 Prochlorococcus marinus MED4 complete ge... 30 0.001 15
AC117076|AC117076.2 Dictyostelium discoideum chromosome 2 ma... 34 0.001 10
BI322718|BI322718.1 kx15d03.y3 Parastrongyloides trichosuri ... 36 0.002 2
AC104700|AC104700.4 Homo sapiens BAC clone RP11-712I20 from ... 32 0.002 10
AP004170|AP004170.1 Mycoplasma penetrans genomic DNA, comple... 32 0.006 15
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma... 30 0.026 16
AC115612|AC115612.2 Dictyostelium discoideum chromosome 2 ma... 32 0.028 10
BI743473|BI743473.1 kx44f12.y1 Parastrongyloides trichosuri ... 36 0.036 2
AC123897|AC123897.2 Oryza sativa (japonica cultivar-group) c... 40 0.036 7
AF250284|AF250284.1 Amsacta moorei entomopoxvirus, complete ... 32 0.041 13
AX348530|AX348530.1 Sequence 38 from Patent WO0202809. 50 0.044 1
AC115598|AC115598.2 Dictyostelium discoideum chromosome 2 ma... 32 0.045 11
AE016748|AE016748.1 Staphylococcus epidermidis ATCC 12228, s... 32 0.050 13
AC147523|AC147523.1 Otolemur garnettii clone CH256-193L8, WO... 40 0.052 7
AC128736|AC128736.4 Mus musculus chromosome 15 clone RP24-33... 36 0.056 6
AC101676|AC101676.3 Mus musculus clone RP23-136H21, WORKING ... 36 0.057 7
AE014821|AE014821.1 Plasmodium falciparum 3D7 chromosome 14 ... 32 0.089 10
AX344558|AX344558.1 Sequence 9 from Patent WO0200932. 34 0.099 10
BI742772|BI742772.1 kx34h07.y1 Parastrongyloides trichosuri ... 36 0.13 2
AX251102|AX251102.1 Sequence 70 from Patent WO0168912. 36 0.15 3
AX251260|AX251260.1 Sequence 228 from Patent WO0168912. 30 0.15 5
AC025856|AC025856.13 Homo sapiens chromosome 8, clone RP11-4... 48 0.18 1
AC021393|AC021393.10 Homo sapiens chromosome 8, clone RP11-2... 48 0.18 1
AC069520|AC069520.9 Homo sapiens chromosome 3 clone RP11-269... 48 0.18 1
AC068668|AC068668.10 Homo sapiens chromosome 8, clone RP11-5... 48 0.18 1
AL139078|AL139078.2 Campylobacter jejuni subsp. jejuni NCTC ... 32 0.19 12
U67574|U67574.1 Methanococcus jannaschii section 116 of 150 ... 34 0.23 4
AP003193|AP003193.2 Clostridium perfringens str. 13 DNA, com... 30 0.24 14
AP003363|AP003363.2 Staphylococcus aureus subsp. aureus Mu50... 38 0.24 10
AC117072|AC117072.2 Dictyostelium discoideum chromosome 2 ma... 30 0.24 11
AP003133|AP003133.2 Staphylococcus aureus subsp. aureus N315... 34 0.27 11
AC005139|AC005139.3 Plasmodium falciparum chromosome 12, ***... 34 0.28 11
BX284634|BX284634.8 Mouse DNA sequence from clone RP23-92B18... 36 0.28 9
AC136383|AC136383.1 Rattus norvegicus clone CH230-53O20, ***... 34 0.28 6
AC020749|AC020749.2 Homo sapiens chromosome 3p clone RP11-10... 34 0.29 7
AE016749|AE016749.1 Staphylococcus epidermidis ATCC 12228, s... 34 0.30 10
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 ma... 30 0.31 15
AE002111|AE002111.1 Ureaplasma urealyticum section 12 of 59 ... 38 0.33 3
AC116920|AC116920.2 Dictyostelium discoideum chromosome 2 ma... 30 0.33 12
AP004171|AP004171.1 Mycoplasma penetrans genomic DNA, comple... 32 0.36 13
AC006765|AC006765.1 Caenorhabditis elegans clone Y43H11, ***... 38 0.44 6
AC117749|AC117749.3 Mus musculus clone RP24-319I19, WORKING ... 36 0.45 4
AC034122|AC034122.12 Mus musculus chromosome 1, clone RP23-1... 36 0.46 6
BX572092|BX572092.1 Prochlorococcus marinus MED4 complete ge... 32 0.46 13
AC146052|AC146052.3 Pan troglodytes BAC clone RP43-75P3 from... 40 0.50 7
AC100374|AC100374.3 Mus musculus clone RP23-130B20, WORKING ... 34 0.51 12
AC044896|AC044896.3 Homo sapiens chromosome 2 clone RP11-598... 36 0.54 8
AL139076|AL139076.2 Campylobacter jejuni subsp. jejuni NCTC ... 34 0.58 13
AC135414|AC135414.27 Medicago truncatula clone mth2-8n20, WO... 38 0.64 6
AC133137|AC133137.2 Felis catus clone RP86-506G15, WORKING D... 46 0.69 1
AC123362|AC123362.3 Rattus norvegicus clone CH230-155F17, **... 46 0.69 1
AC133138|AC133138.2 Felis catus clone RP86-85C19, WORKING DR... 46 0.69 1
BQ666262|BQ666262.1 pb38g03.y1 Anc caninum L3 serum stim pAM... 46 0.69 1
BF249948|BF249948.1 pa88g07.y1 Hawdon Ancylostoma caninum L3... 46 0.69 1
AX926716|AX926716.1 Sequence 6 from Patent WO03084989. 36 0.76 10
AC005308|AC005308.8 Plasmodium falciparum chromosome 12 clon... 32 0.86 9
AB012245|AB012245.1 Arabidopsis thaliana genomic DNA, chromo... 38 0.86 4
AC127265|AC127265.4 Mus musculus BAC clone RP24-341O20 from ... 38 0.97 7
AC115441|AC115441.4 Rattus norvegicus clone CH230-182N24, **... 40 0.98 8
AL445564|AL445564.1 Mycoplasma pulmonis (strain UAB CTIP) co... 32 1.0 14
AC122496|AC122496.2 Mus musculus BAC clone RP24-400K16 from ... 38 1.1 7
AC145157|AC145157.8 Medicago truncatula clone mth2-13a15, WO... 32 1.1 8
AF165818|AF165818.4 Guillardia theta nucleomorph chromosome ... 32 1.1 10
AE014017|AE014017.1 Buchnera aphidicola str. Bp (Baizongia p... 32 1.1 13
AP003194|AP003194.2 Clostridium perfringens str. 13 DNA, com... 34 1.2 11
CC768708|CC768708.1 CH240_68A20.TV CHORI-240 Bos taurus geno... 42 1.2 2
AX196296|AX196296.1 Sequence 3 from Patent WO0151627. 32 1.2 12
AX196295|AX196295.1 Sequence 2 from Patent WO0151627. 32 1.2 12
AB063522|AB063522.2 Wigglesworthia brevipalpis DNA, complete... 36 1.2 13
AB063521|AB063521.2 Wigglesworthia brevipalpis DNA, complete... 36 1.2 15
AF325528|AF325528.1 Lumpy skin disease virus isolate Neethli... 34 1.3 8
AF409137|AF409137.1 Lumpy skin disease virus isolate Neethli... 34 1.3 8
AC103525|AC103525.5 Rattus norvegicus clone CH230-42C5, WORK... 38 1.3 8
AY077834|AY077834.1 Sheeppox virus strain NISKHI, complete g... 34 1.4 7
AY077832|AY077832.1 Sheeppox virus strain TU-V02127, complet... 34 1.4 7
AY077833|AY077833.1 Sheeppox virus strain A, complete genome. 34 1.4 7
CE758891|CE758891.1 tigr-gss-dog-17000369694869 Dog Library ... 34 1.4 2
BS000220|BS000220.1 Pan troglodytes chromosome 22 clone:PTB-... 32 1.4 7
AP004173|AP004173.1 Mycoplasma penetrans genomic DNA, comple... 30 1.4 14
AP003466|AP003466.2 Homo sapiens genomic DNA, chromosome 8q2... 38 1.4 8
AC141758|AC141758.1 Apis mellifera clone CH224-60D16, WORKIN... 38 1.5 8
AC015472|AC015472.3 Homo sapiens clone RP11-3H9, WORKING DRA... 34 1.5 6
AC127312|AC127312.4 Mus musculus BAC clone RP23-306F21 from ... 36 1.5 7
AP004526|AP004526.1 Lotus corniculatus var. japonicus genomi... 34 1.5 7
AC099783|AC099783.2 Homo sapiens chromosome 3 clone RP11-115... 38 1.5 6
AC112259|AC112259.2 Mus musculus chromosome UNK clone RP23-1... 32 1.5 11
AE003441|AE003441.2 Drosophila melanogaster chromosome X sec... 42 1.5 6
AL929549|AL929549.9 Zebrafish DNA sequence *** SEQUENCING IN... 34 1.6 6
AE014841|AE014841.1 Plasmodium falciparum 3D7 chromosome 11 ... 30 1.6 13
AL358337|AL358337.1 Human chromosome 14 DNA sequence *** IN ... 32 1.6 10
AL929354|AL929354.1 Plasmodium falciparum strain 3D7, chromo... 32 1.6 14
AC147095|AC147095.1 Pan troglodytes chromosome 7 clone RP43-... 34 1.6 7
AC009071|AC009071.6 Homo sapiens chromosome 16 clone RP11-31... 30 1.7 10
AP004785|AP004785.1 Oryza sativa (japonica cultivar-group) g... 32 1.8 7
AC111151|AC111151.3 Homo sapiens chromosome 11, clone CTD-25... 32 1.8 8
>Y00145|Y00145.1 Dictyostelium discoideum UDP glucose
pyrophosphorylase gene (UDPGP; EC 2.7.7.9).
Length = 2318
Score = 841 bits (424), Expect(4) = 0.0
Identities = 424/424 (100%)
Strand = Plus / Plus
Query: 275 cttgaaaatcataaagcaatggtacaattagaaacaccagcaggtatgggtattcaaaat 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1841 cttgaaaatcataaagcaatggtacaattagaaacaccagcaggtatgggtattcaaaat 1900
Query: 335 tttaagaattcagttgcaatttttgtaccacgtgatagatatcgtccaattaaatcaaca 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1901 tttaagaattcagttgcaatttttgtaccacgtgatagatatcgtccaattaaatcaaca 1960
Query: 395 agtcaattattggttgcacaatcaaatattttccaatttgatcatggtcaagttaaatta 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1961 agtcaattattggttgcacaatcaaatattttccaatttgatcatggtcaagttaaatta 2020
Query: 455 aattcaaagagagaaggtcaagatgtaccacttgttaaattgggtgaagaattttcaaca 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2021 aattcaaagagagaaggtcaagatgtaccacttgttaaattgggtgaagaattttcaaca 2080
Query: 515 gtttcagattatgaaaagagatttaaatcaattccagatttattggaattggatcatctt 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2081 gtttcagattatgaaaagagatttaaatcaattccagatttattggaattggatcatctt 2140
Query: 575 actgtttctggtgatgtttactttggttcaagaattactcttaaaggtacagtcattatt 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2141 actgtttctggtgatgtttactttggttcaagaattactcttaaaggtacagtcattatt 2200
Query: 635 gtagctaatcatggtgaacgtgttgatattccagatggtgtggttttagaaaataaagta 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2201 gtagctaatcatggtgaacgtgttgatattccagatggtgtggttttagaaaataaagta 2260
Query: 695 cttt 698
||||
Sbjct: 2261 cttt 2264
Score = 515 bits (260), Expect(4) = 0.0
Identities = 263/264 (99%)
Strand = Plus / Plus
Query: 11 gtattaaatcatattcatttgcaaaagattgaatttggtttagaagttacaaatcgtatt 70
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1465 gtattaaatcatattcatttgcaaaagattgaatttggtttagaagtcacaaatcgtatt 1524
Query: 71 aatactgattcaactggtggtattttaatgtcatataaagataaacttcatcttttggaa 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1525 aatactgattcaactggtggtattttaatgtcatataaagataaacttcatcttttggaa 1584
Query: 131 ttatctcaagttaaaccagagaaattaaagatctttaaagattttaaactttggaataca 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1585 ttatctcaagttaaaccagagaaattaaagatctttaaagattttaaactttggaataca 1644
Query: 191 aataatatttgggttaatttgaaatcagtttcaaatttaattaaagaagataaattagat 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1645 aataatatttgggttaatttgaaatcagtttcaaatttaattaaagaagataaattagat 1704
Query: 251 ttagattggattgttaattatcca 274
||||||||||||||||||||||||
Sbjct: 1705 ttagattggattgttaattatcca 1728
Score = 58.0 bits (29), Expect(4) = 0.0
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 715 tttngatcattaaattctactcaaaaaattaa 746
||| ||||||||||||||||||||||||||||
Sbjct: 2281 tttggatcattaaattctactcaaaaaattaa 2312
Score = 36.2 bits (18), Expect(4) = 0.0
Identities = 18/18 (100%)
Strand = Plus / Plus
Query: 700 ctggcactcttagaattt 717
||||||||||||||||||
Sbjct: 2265 ctggcactcttagaattt 2282
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 22,929,308
Number of Sequences: 30946621
Number of extensions: 22929308
Number of successful extensions: 1894531
Number of sequences better than 10.0: 485
length of query: 746
length of database: T,471,040,602
effective HSP length: 22
effective length of query: 724
effective length of database: S,790,214,940
effective search space: 25912115616560
effective search space used: 25912115616560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home