Homology SFH819 vs DNA
Query= SFH819 (SFH819Q) /CSM/SF/SFH8-A/SFH819Q.Seq.d/
(1235 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; /db/DDBJNEW.DATA/b/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrt.seq; ddbjinv1.seq;
ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
/db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq;
ddbjvrl3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss7.seq;
ddbjgss8.seq; ddbjgss9.seq; /db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss2.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss3.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; /db/DDBJNEW.DATA/b/new_ddbjhtg1.seq;
ddbjpat1.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq;
ddbjpat6.seq; ddbjpat7.seq; ddbjpat8.seq;
/db/DDBJNEW.DATA/b/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; /db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq; est_crei1.seq;
/db/DDBJNEW.DATA/b/new_est_crei1.seq; est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/b/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/b/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/b/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/b/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/b/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/b/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_stro1.seq;
/db/DDBJNEW.DATA/b/new_est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/b/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
/db/DDBJNEW.DATA/b/new_est_rest1.seq
30,567,641 sequences; T,169,320,571 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AP004171|AP004171.1 Mycoplasma penetrans genomic DNA, comple... 34 0.014 14
BM959455|BM959455.1 PLATE_12_H01_15.AB1 GS Lambda-Triplex, 1... 50 0.074 1
BX553178|BX553178.1 Glossina morsitans morsitans (Tseatse fl... 50 0.074 1
CA792088|CA792088.1 AGENCOURT_10315655 NICHD_XGC_Emb1 Xenopu... 42 0.084 2
AZ685788|AZ685788.1 ENTMI42TR Entamoeba histolytica Sheared ... 36 0.21 3
AP003191|AP003191.2 Clostridium perfringens str. 13 DNA, com... 40 0.25 14
AZ529286|AZ529286.1 ENTBC36TF Entamoeba histolytica Sheared ... 36 0.25 3
CB833187|CB833187.1 USDA-FP_100737 Adult Alate Brown Citrus ... 48 0.29 1
AC116551|AC116551.2 Dictyostelium discoideum chromosome 2 ma... 40 0.53 9
AC116988|AC116988.2 Dictyostelium discoideum chromosome 2 ma... 38 0.56 11
AC128712|AC128712.9 Homo sapiens 3 BAC RP11-642L11 (Roswell ... 42 0.85 5
AC009317|AC009317.4 Genomic sequence for Arabidopsis thalian... 46 1.2 1
AB076984|AB076984.1 Arabidopsis thaliana DNA, chromosome 1, ... 46 1.2 1
AC027036|AC027036.12 Arabidopsis thaliana chromosome 1 BAC T... 46 1.2 1
CK016989|CK016989.1 AGENCOURT_16541547 NIH_ZGC_10 Danio reri... 28 2.4 4
AL445564|AL445564.1 Mycoplasma pulmonis (strain UAB CTIP) co... 34 3.7 13
AC117705|AC117705.3 Mus musculus clone RP23-468B10, WORKING ... 44 4.5 1
BV044452|BV044452.1 S212P60488FC11.T0 CZECHII/Ei Mus musculu... 44 4.5 1
BE576037|BE576037.1 dc32f05.y1 NICHD_XGC_Emb3 Xenopus laevis... 44 4.5 1
AQ979015|AQ979015.1 RPCI-23-349A18.TV RPCI-23 Mus musculus g... 44 4.5 1
AL132975|AL132975.1 Arabidopsis thaliana DNA chromosome 3, B... 44 4.5 1
AL353689|AL353689.26 Human DNA sequence from clone RP5-1087E... 44 4.5 1
CF803316|CF803316.1 rg70a02.y1 Meloidogyne hapla female SL1 ... 44 4.5 1
BZ500097|BZ500097.1 BONRG79TR BO_1.6_2_KB_tot Brassica olera... 44 4.5 1
AE017009|AE017009.1 Bacillus cereus ATCC 14579 section 12 of... 34 4.7 10
AP002441|AP002441.1 Homo sapiens genomic DNA, chromosome 18q... 38 6.5 8
AF321237|AF321237.1 Homo sapiens chromosome 11p15.4 clone RP... 38 7.5 5
AC004401|AC004401.3 Arabidopsis thaliana chromosome 2 clone ... 34 8.2 7
CG819603|CG819603.1 SOYDU63TH LargeInsertSoybeanGenLib Glyci... 30 9.1 3
L63545|L63545.1 Lymphocystis disease virus 1, complete genome. 34 9.9 6
AL034419|AL034419.22 Human DNA sequence from clone RP5-1108D... 42 18 1
BX681417|BX681417.4 Zebrafish DNA sequence *** SEQUENCING IN... 42 18 1
AC027173|AC027173.2 Homo sapiens chromosome 6 clone RP11-531... 42 18 1
AC011852|AC011852.5 Homo sapiens chromosome 11 clone RP11-39... 42 18 1
AF323668|AF323668.1 Bacteriophage bIL285, complete genome. 42 18 1
AL806535|AL806535.7 Mouse DNA sequence from clone RP23-456J6... 42 18 1
AC010321|AC010321.8 Homo sapiens chromosome 16 clone CTD-254... 42 18 1
AC110765|AC110765.5 Homo sapiens BAC clone RP11-69L1 from 2,... 42 18 1
AW340119|AW340119.1 hc93e09.x1 Soares_NFL_T_GBC_S1 Homo sapi... 42 18 1
AB093513|AB093513.1 Saccharomyces pastorianus VMA1 gene for ... 42 18 1
AC090152|AC090152.4 Homo sapiens chromosome 8, clone RP11-55... 42 18 1
AC105285|AC105285.3 Homo sapiens BAC clone RP11-10K16 from 4... 42 18 1
R79275|R79275.1 yi84d04.r1 Soares placenta Nb2HP Homo sapien... 42 18 1
G53389|G53389.1 SHGC-82501 Human Homo sapiens STS genomic, s... 42 18 1
AC128375|AC128375.3 Rattus norvegicus clone CH230-183C6, ***... 42 18 1
AC106988|AC106988.6 Rattus norvegicus clone CH230-228K17, **... 42 18 1
AQ081945|AQ081945.1 RPCI11-56P19.TJ RPCI-11 Homo sapiens gen... 42 18 1
AB093502|AB093502.1 Saccharomyces cerevisiae VMA1 gene for v... 42 18 1
AB093501|AB093501.1 Saccharomyces cerevisiae VMA1 gene for v... 42 18 1
AB093500|AB093500.1 Saccharomyces cerevisiae VMA1 gene for v... 42 18 1
AB093499|AB093499.1 Saccharomyces cerevisiae VMA1 gene for v... 42 18 1
AB093498|AB093498.1 Saccharomyces cerevisiae VMA1 gene for v... 42 18 1
AB093497|AB093497.1 Saccharomyces cerevisiae VMA1 gene for v... 42 18 1
AB093495|AB093495.1 Saccharomyces cerevisiae VMA1 gene for v... 42 18 1
AB093496|AB093496.1 Saccharomyces cerevisiae VMA1 gene for v... 42 18 1
AB093503|AB093503.1 Saccharomyces cerevisiae VMA1 gene for v... 42 18 1
AL080249|AL080249.26 Human DNA sequence from clone RP4-564F2... 42 18 1
BX571812|BX571812.3 Zebrafish DNA sequence *** SEQUENCING IN... 42 18 1
AC112921|AC112921.2 Homo sapiens chromosome X clone RP11-327... 42 18 1
AC109683|AC109683.4 Rattus norvegicus clone CH230-75O16, ***... 42 18 1
AC103683|AC103683.1 Homo sapiens chromosome 8 clone CTB-3244... 42 18 1
AL135933|AL135933.11 Human DNA sequence from clone RP4-774E4... 42 18 1
AU257031|AU257031.1 Mus musculus mRNA, clone:BED0009597, 3' ... 42 18 1
BQ635990|BQ635990.1 hd03a01.y1 Human Retina cDNA (Un-normali... 42 18 1
BM314442|BM314442.1 ig54e09.x1 HR85 islet Homo sapiens cDNA ... 42 18 1
AX109957|AX109957.1 Sequence 690 from Patent WO0123604. 42 18 1
CC830884|CC830884.1 ZMMBBb0180L02.r ZMMBBb Zea mays subsp. m... 42 18 1
AY184957|AY184957.1 Equus caballus retinoblastoma binding pr... 42 18 1
BC029352|BC029352.1 Homo sapiens retinoblastoma binding prot... 42 18 1
BE929620|BE929620.1 MR3-GN0029-310800-003-f09 GN0029 Homo sa... 42 18 1
AI375181|AI375181.1 tc10c10.x1 Soares_NhHMPu_S1 Homo sapiens... 42 18 1
BX648661|BX648661.1 Homo sapiens mRNA; cDNA DKFZp686P0638 (f... 42 18 1
CB529116|CB529116.1 UI-H-FT2-bjg-j-24-0-UI.s1 NCI_CGAP_FT2 H... 42 18 1
AI476770|AI476770.1 tj82f01.x1 Soares_NSF_F8_9W_OT_PA_P_S1 H... 42 18 1
BX490035|BX490035.1 Homo sapiens mRNA; EST DKFZp686G0770_r1 ... 42 18 1
AF147463|AF147463.1 T7 Expression vector pNam, complete sequ... 42 18 1
AC106923|AC106923.5 Rattus norvegicus clone CH230-67K19, WOR... 42 18 1
AE006337|AE006337.1 Lactococcus lactis subsp. lactis IL1403 ... 42 18 1
BF057075|BF057075.1 7k15e03.x1 NCI_CGAP_GC6 Homo sapiens cDN... 42 18 1
BF057068|BF057068.1 7k15d07.x1 NCI_CGAP_GC6 Homo sapiens cDN... 42 18 1
AL391095|AL391095.5 Human DNA sequence *** SEQUENCING IN PRO... 42 18 1
AC020605|AC020605.3 Homo sapiens chromosome 8 clone RP11-554... 42 18 1
AL672182|AL672182.18 Mouse DNA sequence from clone RP23-293I... 42 18 1
BQ638916|BQ638916.1 hd29b08.y1 Human Retina cDNA (Un-normali... 42 18 1
AC010353|AC010353.3 Homo sapiens chromosome 8 clone CTD-2022... 42 18 1
M21609|M21609.1 Saccharomyces cerevisiae transmembrane ATPas... 42 18 1
AB112075|AB112075.1 Homo sapiens RBBP6 mRNA for retinoblasto... 42 18 1
BE929593|BE929593.1 MR3-GN0029-290800-001-g12 GN0029 Homo sa... 42 18 1
BE220121|BE220121.1 hv67d09.x1 NCI_CGAP_Lu24 Homo sapiens cD... 42 18 1
CB130191|CB130191.1 K-EST0180046 L11SNU354 Homo sapiens cDNA... 42 18 1
AC009873|AC009873.2 Homo sapiens chromosome 15 clone RP11-12... 42 18 1
X83276|X83276.1 S.cerevisiae DNA for ORFs from chromosome IV. 42 18 1
R77235|R77235.1 yi72d11.r1 Soares placenta Nb2HP Homo sapien... 42 18 1
BX294128|BX294128.3 Zebrafish DNA sequence *** SEQUENCING IN... 42 18 1
AC023462|AC023462.2 Homo sapiens chromosome 6 clone RP11-386... 42 18 1
AC127952|AC127952.3 Rattus norvegicus clone CH230-152M19, **... 42 18 1
AC113446|AC113446.4 Mus musculus clone RP23-258C6, WORKING D... 42 18 1
BC063524|BC063524.1 Homo sapiens cDNA clone IMAGE:4369701, p... 42 18 1
AC068388|AC068388.7 Homo sapiens chromosome 3, clone RP11-29... 42 18 1
BC043556|BC043556.1 Homo sapiens, clone IMAGE:5184785, mRNA. 42 18 1
>AP004171|AP004171.1 Mycoplasma penetrans genomic DNA, complete sequence,
section 2/5.
Length = 300050
Score = 34.2 bits (17), Expect(14) = 0.014
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 258 ttaaagcattatcatca 274
|||||||||||||||||
Sbjct: 203619 ttaaagcattatcatca 203603
Score = 32.2 bits (16), Expect(14) = 0.014
Identities = 16/16 (100%)
Strand = Plus / Plus
Query: 217 atttaatcaatataca 232
||||||||||||||||
Sbjct: 71608 atttaatcaatataca 71623
Score = 30.2 bits (15), Expect(14) = 0.014
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 174 aatttgtaaaagatg 188
|||||||||||||||
Sbjct: 29843 aatttgtaaaagatg 29857
Score = 30.2 bits (15), Expect(14) = 0.014
Identities = 15/15 (100%)
Strand = Plus / Minus
Query: 44 acttatacttttaaa 58
|||||||||||||||
Sbjct: 286457 acttatacttttaaa 286443
Score = 30.2 bits (15), Expect(14) = 0.014
Identities = 21/23 (91%)
Strand = Plus / Plus
Query: 861 gcaggtttagatcctgtcatccc 883
||||||| | |||||||||||||
Sbjct: 151476 gcaggttcaaatcctgtcatccc 151498
Score = 28.2 bits (14), Expect(14) = 0.014
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 715 atcaatatgtgcca 728
||||||||||||||
Sbjct: 108696 atcaatatgtgcca 108709
Score = 28.2 bits (14), Expect(14) = 0.014
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 191 atgataaaaacaat 204
||||||||||||||
Sbjct: 226791 atgataaaaacaat 226778
Score = 28.2 bits (14), Expect(14) = 0.014
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 820 atcaaaataaaaga 833
||||||||||||||
Sbjct: 137240 atcaaaataaaaga 137253
Score = 26.3 bits (13), Expect(14) = 0.014
Identities = 16/17 (94%)
Strand = Plus / Plus
Query: 693 attggagcaattgcaaa 709
|||| ||||||||||||
Sbjct: 103038 attgtagcaattgcaaa 103054
Score = 26.3 bits (13), Expect(14) = 0.014
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 1103 taaagatgattta 1115
|||||||||||||
Sbjct: 173448 taaagatgattta 173460
Score = 26.3 bits (13), Expect(14) = 0.014
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 909 gatacttcaagta 921
|||||||||||||
Sbjct: 171663 gatacttcaagta 171675
Score = 26.3 bits (13), Expect(14) = 0.014
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 629 agctggtaaaaca 641
|||||||||||||
Sbjct: 98791 agctggtaaaaca 98803
Score = 26.3 bits (13), Expect(14) = 0.014
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 538 taataaggaagaa 550
|||||||||||||
Sbjct: 85453 taataaggaagaa 85465
Score = 26.3 bits (13), Expect(14) = 0.014
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 121 taaatataatgca 133
|||||||||||||
Sbjct: 28467 taaatataatgca 28479
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 26,350,876
Number of Sequences: 30567641
Number of extensions: 26350876
Number of successful extensions: 1957907
Number of sequences better than 10.0: 252
length of query: 1235
length of database: T,169,320,571
effective HSP length: 23
effective length of query: 1212
effective length of database: S,466,264,828
effective search space: 42985112971536
effective search space used: 42985112971536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home