<List of Series> <Series: SFH5-D> <Clone: SFH596> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Clone SFH596

Dictyostelium discoideum cDNA Project Home

Sequence SFH596

ACTGTTGGCC TACTGGNATT TCTCCAATCA TCATATTTAT AATTATATCT
TTTTTGTTTA ATAAAAAAGA AAGAATACCA ACATGAGACT TTTATTGTGT
TTAATTTTCT TAGTTTTTGT TTTCAATTTT GCATTATCAA CAGTTCATTT
CAAAGATACC TTTGATAACG ATTGGGAATC AAGATGGGTT GTTAGTGATT
GGCATAAAGA AGATGGTAAA TCAGGTAAAT TAGTTCATAC TGCAGGTAAA
TGGTTTGGTG ATGAAAATCA AAAAGGTATT CAAACTAGTG AAGATGCTCG
TTTCTACGCT GTATCAGCTA AATTCCCAAG TTTCAGTAAC AAAGGTAAAG
ATTTAGTTCT CCAATACACT GTAAAGAATG AACAAAAAGT TGATTGTGGT
GGTTCATACA TCAAGTTATT ACCATCCAAA TTAGATCAAT CAGCATTCGA
TGGTGAATCT GAATATTCCA TTATGTTTGG TCCAGATGTT TGTGGTGCCT
CAAAGAGAGT TCACGTCATT CTCAACTACA AAGGAAAGAA C---------
-ATCCAGAAT NCAAAGGTGA ATGGAAAGCA AAGANNATCC CNAATCCAGA
ATACAAAGGT GAATGGGTAC ACCCATTAAT TGATAACCCA GAATACGCTG
AAGACAATGA ACTCTACCTC TTTAATGATC TCGGTGCTAT CGGTTTCGAA
TTATGGCAAG TTAAATCTGG TTCCATCTTT AACAATATGA TCGTCACCGA
CTCTGTCGAA GAAGCTAAAG ATTTCTCTGA AAAGACCTTT GTTGCCAACC
AAGAAGCCGA AAAGAAAATG TTTGACGACC TCGAAGCCGC CAAAGCTGAA
GAGAGAAAGA AAGCTGACGA AAAATTAGCT GCCGAAAAAG CTGCTGAAAA
AGAAGCCGAA GAAGCTGATG AAGAAGAAGA AGAAGTCGCT GAAGAAGATT
TAGTTAAAAC TGATGACAAA AAAGAAGAAG TCAAAAAATC TTNCCAAAAA
AGT

Translated Amino Acid Sequence SFH596

<All Frames> 
llaywxfsnhhiynyiffv**KRKNTNMRLLLCLIFLVFVFNFALSTVHFKDTFDNDWES
RWVVSDWHKEDGKSGKLVHTAGKWFGDENQKGIQTSEDARFYAVSAKFPSFSNKGKDLVL
QYTVKNEQKVDCGGSYIKLLPSKLDQSAFDGESEYSIMFGPDVCGASKRVHVILNYKGKN
---

---PEXKGEWKAKXIPNPEYKGEWVHPLIDNPEYAEDNELYLFNDLGAIGFELWQVKSGS
IFNNMIVTDSVEEAKDFSEKTFVANQEAEKKMFDDLEAAKAEERKKADEKLAAEKAAEKE
AEEADEEEEEVAEEDLVKTDDKKEEVKKSXQKS


Homology SFH596 vs CSM-cDNA

<more CSM info> 
Sequences producing significant alignments:                      (bits) Value


SFH596 (SFH596Q) /CSM/SF/SFH5-D/SFH596Q.Seq.d/                       1624   0.0
VFL283 (VFL283Q) /CSM/VF/VFL2-D/VFL283Q.Seq.d/                       1066   0.0
VFL214 (VFL214Q) /CSM/VF/VFL2-A/VFL214Q.Seq.d/                       1066   0.0
AFI321 (AFI321Q) /CSM/AF/AFI3-A/AFI321Q.Seq.d/                       1066   0.0
AFK274 (AFK274Q) /CSM/AF/AFK2-D/AFK274Q.Seq.d/                       1053   0.0
AFK242 (AFK242Q) /CSM/AF/AFK2-B/AFK242Q.Seq.d/                       1053   0.0
AFH646 (AFH646Q) /CSM/AF/AFH6-B/AFH646Q.Seq.d/                       1053   0.0
VFN642 (VFN642Q) /CSM/VF/VFN6-B/VFN642Q.Seq.d/                       1039   0.0
VFM435 (VFM435Q) /CSM/VF/VFM4-B/VFM435Q.Seq.d/                       1039   0.0
VFK631 (VFK631Q) /CSM/VF/VFK6-B/VFK631Q.Seq.d/                       1039   0.0


Homology SFH596 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


U36937|U36937.1 Dictyostelium discoideum calreticulin mRNA, ...   999   0.0    3
BD248385|BD248385.1 Gene participating in tolerance against ...    92   2e-22  2
BH160872|BH160872.1 ENTRI18TR Entamoeba histolytica Sheared ...    44   3e-07  3
AL750674|AL750674.1 Pinus pinaster root EST, clone RN06A11 s...    46   1e-04  4
CF395464|CF395464.1 RTDS2_11_H06.g1_A021 Drought-stressed lo...    46   1e-04  4
BX323873|BX323873.3 Zebrafish DNA sequence *** SEQUENCING IN...    36   3e-04  7
BX548066|BX548066.3 Zebrafish DNA sequence from clone CH211-...    48   5e-04  5
BX649309|BX649309.3 Zebrafish DNA sequence *** SEQUENCING IN...    36   7e-04  10
AF283816|AF283816.1 Pinus taeda calreticulin mRNA, complete ...    46   0.001  4
AL133327|AL133327.10 Human DNA sequence from clone RP11-77F1...    34   0.004  9


Homology SFH596 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


U36937_1(U36937|pid:none) Dictyostelium discoideum calreticulin ...   289   2e-76
BT072764_1(BT072764|pid:none) Salmo salar clone ssal-rgf-539-230...   206   1e-51
CP002684_1076(CP002684|pid:none) Arabidopsis thaliana chromosome...   192   3e-47
AF283816_1(AF283816|pid:none) Pinus taeda calreticulin mRNA, com...   184   9e-45
AC133339_28(AC133339|pid:none) Oryza sativa chromosome 3 BAC OSJ...   184   9e-45
EF085019_1(EF085019|pid:none) Picea sitchensis clone WS0297_I16 ...   182   3e-44
U66344_1(U66344|pid:none) Arabidopsis thaliana calreticulin (Crt...   181   4e-44
U27698_1(U27698|pid:none) Arabidopsis thaliana calreticulin (AtC...   181   4e-44
EF084103_1(EF084103|pid:none) Picea sitchensis clone WS0274_F04 ...   181   4e-44
(Q40401) RecName: Full=Calreticulin; Flags: Precursor;  &T16968(...   181   6e-44


Homology SFH596 vs Genome

<more Genome info> 





<List of Series> <Series: SFH5-D> <Clone: SFH596> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>





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