Dictyostelium discoideum cDNA Clone SFH484

Sequence SFH484

TTTTCTTAAA ACAAATAAAT TAAATTAAAT AAAAAATAAA AATGGATGGT
GAAGATGTTC AAGCTTTAGT TATTGATAAC GGTTCTGGTA TGTGTAAAGC
CGGTTTTGCT GGTGACGATG CTCCACGTGC TGTTTTCCCA TCAATTGTTG
GTCGTCCAAG ACACACTGGT GTTATGGTTG GTATGGGTCA AAAAGACTCA
TATGTAGGTG ATGAAGCCCA ATCAAAGGGA GGTATCTTAA CCCTCAAATA
CCCAATTGAA CACGGTATCG TTACCAACTG GGATGATATG GAAAAAATCT
GGCATCATAC TTTCTACAAT GAACTCCGTG TTGCACCAGA AGAACACCCA
GTTCTCTTAA CCGAAGCTCC AT-------- --TTATATGC CTCTGGTCGT
ACCACCGGTA TTGTTATGGA TTCAGGTGAT GGTGTCTCCC ACACTGTACC
AATCTATGAA GGTTATGCCT TACCACATGC CATCTTACGT TTAGATTTAG
CTGGTCGTGA TCTCACCGAT TACATGATGA AAATCTTAAC TGAACGTGGT
TACTCATTCA CCACCACTGC CGAAAGAGAA ATCGTCAGAG ATATCAAAGA
GAAATTAGCC TACGTCGCCC TCGACTTTGA AGCTGAAATG CAAACTGCTG
CCTCATCATC AGCCCTCGAA AAATCATACG AATTACCAGA CGGTCAAGTT
ATCACCATTG GTAACGAACG TTTCCGTTGT CCAGAAGCCC TCTTCCAACC
ATCATTCTTA GGTATGGAAT CTGCTGGTAT CCACGAAACC ACATACAACT
CCATCATGAA ATGTGATGTT GATATCCGTA AAGATTTATA CGGTAATGTC
GTCTTATCAG GTGGTACAAC TATGTTCCCA GGTATTGCTG ATCGTATGAA
CAAAGAATTA ACTGCTTTAG CACCATCAAC CATGAAAATT AAAATCATTG
CTCCACCAGA ACGTAAATAC TCTGTCTGGA TTGGTGGATC TATTTTAGCT
TCACTCTCAA CTTTCCAACA AATGTGGATC TCAAAAGAAG AATATGAGAA
TCGGTCCATC AATGTCCACA GAAAAGTTTC TAAATCA

Translated Amino Acid Sequence SFH484

flkqin*ik*KIKMDGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVG
MGQKDSYVGDEAQSKGGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT
EAP---

---LYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGY
SFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYELPDGQVITIGNERFRCP
EALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMNKELT
ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYENRSINVHRKVSKS

Homology SFH484 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SFH484 (SFH484Q) /CSM/SF/SFH4-D/SFH484Q.Seq.d/                       2010   0.0
VFJ696 (VFJ696Q) /CSM/VF/VFJ6-D/VFJ696Q.Seq.d/                       1245   0.0
VHN439 (VHN439Q) /CSM/VH/VHN4-B/VHN439Q.Seq.d/                       1243   0.0
VFJ722 (VFJ722Q) /CSM/VF/VFJ7-A/VFJ722Q.Seq.d/                       1243   0.0
VFA787 (VFA787Q) /CSM/VF/VFA7-D/VFA787Q.Seq.d/                       1243   0.0
VFJ848 (VFJ848Q) /CSM/VF/VFJ8-B/VFJ848Q.Seq.d/                       1235   0.0
VFB241 (VFB241Q) /CSM/VF/VFB2-B/VFB241Q.Seq.d/                       1235   0.0
VFI228 (VFI228Q) /CSM/VF/VFI2-B/VFI228Q.Seq.d/                       1233   0.0
VHK436 (VHK436Q) /CSM/VH/VHK4-B/VHK436Q.Seq.d/                       1231   0.0
SLA782 (SLA782Q) /CSM/SL/SLA7-D/SLA782Q.Seq.d/                       1231   0.0

Homology SFH484 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


M14146|M14146.1 D.discoideum actin 15 gene, complete cds.        1318   0.0    1
AC115579|AC115579.2 Dictyostelium discoideum chromosome 2 ma...  1318   0.0    1
X03281|X03281.1 Dictyostelium discoideum gene for actin A8.      1209   0.0    1
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma...  1191   0.0    5
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 ma...  1088   0.0    1
AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 ma...  1049   0.0    9
X03282|X03282.1 dictyostelium discoideum gene for actin A12.     1041   0.0    2
AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 ma...  1033   0.0    7
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma...   922   0.0    2
X03283|X03283.1 Dictyostelium discoideum gene for actin A3-S1.    755   0.0    3

Homology SFH484 vs Protein

Sequences producing significant alignments:                      (bits) Value


AM236595_1(AM236595|pid:none) Haliotis tuberculata mRNA for acti...   423   e-176
DQ787858_1(DQ787858|pid:none) Mizuhopecten yessoensis beta-actin...   424   e-175
HM231141_1(HM231141|pid:none) Hydractinia echinata non-muscle ac...   423   e-175
EU244396_1(EU244396|pid:none) Haliotis diversicolor clone HDr4CJ...   425   e-175
GU338003_1(GU338003|pid:none) Loligo bleekeri actin mRNA, comple...   424   e-175
FN357409_26(FN357409|pid:none) Schistosoma mansoni genome sequen...   420   e-175
(Q93129) RecName: Full=Actin, cytoplasmic; AltName: Full=BbCA1; ...   422   e-175
(Q26065) RecName: Full=Actin, adductor muscle; Flags: Precursor;...   423   e-175
AY335441_1(AY335441|pid:none) Chlamys farreri actin mRNA, comple...   422   e-175
EU878255_1(EU878255|pid:none) Malo kingi clone Mk-BJA-1 non-musc...   422   e-175

Homology SFH484 vs Genome