Homology SFH205 vs DNA
Query= SFH205 (SFH205Q) /CSM/SF/SFH2-A/SFH205Q.Seq.d/
(882 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/a/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/a/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; ddbjrod9.seq; /db/DDBJNEW.DATA/a/new_ddbjrod.seq;
ddbjmam.seq; /db/DDBJNEW.DATA/a/new_ddbjmam.seq; ddbjvrt1.seq;
ddbjvrt2.seq; ddbjvrt3.seq; /db/DDBJNEW.DATA/a/new_ddbjvrt.seq;
ddbjinv1.seq; ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/a/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/a/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
ddbjbct7.seq; /db/DDBJNEW.DATA/a/new_ddbjbct.seq; ddbjvrl1.seq;
ddbjvrl2.seq; ddbjvrl3.seq; /db/DDBJNEW.DATA/a/new_ddbjvrl.seq;
ddbjphg.seq; /db/DDBJNEW.DATA/a/new_ddbjphg.seq; ddbjuna.seq;
ddbjgss1.seq; ddbjgss10.seq; ddbjgss11.seq; ddbjgss12.seq;
ddbjgss13.seq; ddbjgss14.seq; ddbjgss15.seq; ddbjgss16.seq;
ddbjgss17.seq; ddbjgss18.seq; ddbjgss19.seq; ddbjgss2.seq;
ddbjgss20.seq; ddbjgss21.seq; ddbjgss22.seq; ddbjgss23.seq;
ddbjgss24.seq; ddbjgss25.seq; ddbjgss26.seq; ddbjgss27.seq;
ddbjgss28.seq; ddbjgss29.seq; ddbjgss3.seq; ddbjgss30.seq;
ddbjgss31.seq; ddbjgss32.seq; ddbjgss33.seq; ddbjgss34.seq;
ddbjgss35.seq; ddbjgss36.seq; ddbjgss37.seq; ddbjgss38.seq;
ddbjgss39.seq; ddbjgss4.seq; ddbjgss40.seq; ddbjgss41.seq;
ddbjgss42.seq; ddbjgss43.seq; ddbjgss44.seq; ddbjgss45.seq;
ddbjgss46.seq; ddbjgss47.seq; ddbjgss48.seq; ddbjgss49.seq;
ddbjgss5.seq; ddbjgss50.seq; ddbjgss51.seq; ddbjgss52.seq;
ddbjgss53.seq; ddbjgss54.seq; ddbjgss55.seq; ddbjgss56.seq;
ddbjgss57.seq; ddbjgss58.seq; ddbjgss59.seq; ddbjgss6.seq;
ddbjgss60.seq; ddbjgss61.seq; ddbjgss62.seq; ddbjgss63.seq;
ddbjgss64.seq; ddbjgss65.seq; ddbjgss66.seq; ddbjgss67.seq;
ddbjgss68.seq; ddbjgss69.seq; ddbjgss7.seq; ddbjgss70.seq;
ddbjgss71.seq; ddbjgss72.seq; ddbjgss73.seq; ddbjgss74.seq;
ddbjgss75.seq; ddbjgss8.seq; ddbjgss9.seq;
/db/DDBJNEW.DATA/a/new_ddbjgss1.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg6.seq; ddbjhtg7.seq; ddbjhtg8.seq; ddbjhtg9.seq;
/db/DDBJNEW.DATA/a/new_ddbjhtg1.seq; ddbjpat1.seq; ddbjpat2.seq;
ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq; ddbjpat6.seq; ddbjpat7.seq;
ddbjpat8.seq; ddbjpat9.seq; /db/DDBJNEW.DATA/a/new_ddbjpat.seq;
ddbjsts1.seq; ddbjsts2.seq; ddbjsts3.seq;
/db/DDBJNEW.DATA/a/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/a/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/a/new_est_atha1.seq; est_btra1.seq; est_cele1.seq;
est_crei1.seq; est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/a/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/a/new_est_dmel1.seq; est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/a/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/a/new_est_hum1.seq;
est_hvul1.seq; est_lesc1.seq; /db/DDBJNEW.DATA/a/new_est_lesc1.seq;
est_mous1.seq; est_mous2.seq; est_mous3.seq;
/db/DDBJNEW.DATA/a/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/a/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/a/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/a/new_est_rnor1.seq; est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/a/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/a/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/a/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
est_rest3.seq; /db/DDBJNEW.DATA/a/new_est_rest1.seq
30,913,623 sequences; T,446,014,884 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
X51892|X51892.1 Dictyostelium discoideum SP60 gene for spore... 866 0.0 4
M26239|M26239.1 D.discoideum spore coat protein SP60 gene, c... 866 0.0 4
AC116977|AC116977.2 Dictyostelium discoideum chromosome 2 ma... 866 0.0 10
AC115685|AC115685.1 Dictyostelium discoideum chromosome 2 ma... 866 0.0 6
X52105|X52105.1 Dictyostelium discoideum SP60 gene for spore... 80 2e-35 4
M34546|M34546.1 D.discoideum spore coat 60 (sp60) gene, 5' f... 88 2e-13 1
AC117267|AC117267.1 Dictyostelium discoideum chromosome 2 ma... 56 6e-08 4
AC115610|AC115610.2 Dictyostelium discoideum chromosome 2 ma... 56 9e-08 4
U25144|U25144.1 Dictyostelium discoideum spore coat protein ... 56 1e-07 3
BX088711|BX088711.10 Zebrafish DNA sequence *** SEQUENCING I... 46 0.82 1
BX571707|BX571707.4 Zebrafish DNA sequence *** SEQUENCING IN... 46 0.82 1
AC019267|AC019267.3 Homo sapiens clone RP11-7M4, WORKING DRA... 46 0.82 1
BV025443|BV025443.1 S212P6456FC5.T0 CZECHII/Ei Mus musculus ... 42 1.8 2
AP001699|AP001699.1 Homo sapiens genomic DNA, chromosome 21q... 32 2.2 10
AL161576|AL161576.2 Arabidopsis thaliana DNA chromosome 4, c... 40 2.7 6
AC024960|AC024960.2 Homo sapiens chromosome 18 clone RP11-43... 34 3.0 6
AC130077|AC130077.2 Rattus norvegicus clone CH230-165L20, **... 44 3.3 1
AC103250|AC103250.5 Rattus norvegicus clone CH230-151F22, **... 44 3.3 1
BQ546186|BQ546186.1 EST629813 TpMugugaSh01 Theileria parva c... 44 3.3 1
CB461418|CB461418.1 721377 MARC 6BOV Bos taurus cDNA 3', mRN... 44 3.3 1
AC128916|AC128916.3 Rattus norvegicus clone CH230-336D7, ***... 44 3.3 1
AL948786|AL948786.1 Arabidopsis thaliana T-DNA flanking sequ... 44 3.3 1
AC138262|AC138262.1 Homo sapiens chromosome 8 clone RP11-252... 38 3.7 2
AC024359|AC024359.3 Homo sapiens chromosome 8 clone RP11-272... 32 5.8 7
Z68215|Z68215.1 Caenorhabditis elegans cosmid C53B4. 32 6.3 2
AC027756|AC027756.2 Homo sapiens chromosome 4 clone RP11-655... 38 6.4 7
AC127025|AC127025.7 Homo sapiens chromosome 17, clone CTD-26... 32 6.4 6
BH007779|BH007779.1 ee76b10.x2 TO1000 Brassica oleracea geno... 40 7.1 2
BH007778|BH007778.1 ee76b10.x1 TO1000 Brassica oleracea geno... 40 7.3 2
AL731821|AL731821.10 Mouse DNA sequence from clone RP23-81G1... 36 8.6 5
AZ681881|AZ681881.1 ENTIB77TF Entamoeba histolytica Sheared ... 34 8.9 2
AZ691513|AZ691513.1 ENTLQ35TF Entamoeba histolytica Sheared ... 34 9.0 2
AZ689377|AZ689377.1 ENTLG30TF Entamoeba histolytica Sheared ... 34 9.1 2
AZ543131|AZ543131.1 ENTEM57TF Entamoeba histolytica Sheared ... 34 9.4 2
AZ680468|AZ680468.1 ENTHL15TR Entamoeba histolytica Sheared ... 34 9.7 2
AL139076|AL139076.2 Campylobacter jejuni subsp. jejuni NCTC ... 42 13 1
AB090308|AB090308.2 Bombyx mori Bmtitin1, Bmtitin2, Bmmiple,... 42 13 1
AC110577|AC110577.6 Mus musculus clone RP23-329N11, WORKING ... 42 13 1
AC102011|AC102011.3 Mus musculus clone RP24-536B19, WORKING ... 42 13 1
AC129440|AC129440.3 Rattus norvegicus clone CH230-112K14, **... 42 13 1
BW031176|BW031176.1 Ciona intestinalis cDNA, clone:cibd017i0... 42 13 1
AQ656767|AQ656767.1 Sheared DNA-21D17.TF Sheared DNA Trypano... 42 13 1
BG281909|BG281909.1 602402675F1 NIH_MGC_20 Homo sapiens cDNA... 42 13 1
AC106671|AC106671.4 Rattus norvegicus clone CH230-97G21, WOR... 42 13 1
AC095692|AC095692.5 Rattus norvegicus clone CH230-9D3, WORKI... 42 13 1
AL732435|AL732435.17 Mouse DNA sequence from clone RP23-48L1... 42 13 1
AR408738|AR408738.1 Sequence 17 from patent US 6632636. 42 13 1
AX067442|AX067442.1 Sequence 17 from Patent WO0078968. 42 13 1
AC115347|AC115347.5 Rattus norvegicus clone CH230-61F18, ***... 42 13 1
BU721545|BU721545.1 SJM2BZA08 SJM Schistosoma japonicum cDNA... 42 13 1
AB079868|AB079868.1 Bombyx mori Bmmiple gene for Pleiotrophi... 42 13 1
AP002962|AP002962.2 Homo sapiens genomic DNA, chromosome 11q... 42 13 1
AL512430|AL512430.14 Human DNA sequence from clone RP11-346C... 42 13 1
BM027745|BM027745.1 CsaC30411 Saffron Corm C3 Lambda Zap Exp... 42 13 1
CD452229|CD452229.1 USDA-FP_104649 Adult Alate Brown Citrus ... 42 13 1
AC115365|AC115365.5 Rattus norvegicus clone CH230-25P9, WORK... 42 13 1
BU721552|BU721552.1 SJM2BZB03 SJM Schistosoma japonicum cDNA... 42 13 1
AC113288|AC113288.4 Mus musculus chromosome 5 clone RP23-414... 42 13 1
BU721779|BU721779.1 SJM2CBF06 SJM Schistosoma japonicum cDNA... 42 13 1
AX653655|AX653655.1 Sequence 3525 from Patent WO03000898. 42 13 1
AC100043|AC100043.8 Mus musculus chromosome 3, clone RP23-32... 42 13 1
AP000665|AP000665.5 Homo sapiens genomic DNA, chromosome 11q... 42 13 1
AP001192|AP001192.3 Homo sapiens genomic DNA, chromosome 11q... 42 13 1
AC122785|AC122785.3 Mus musculus clone RP24-247G11, WORKING ... 42 13 1
AC107339|AC107339.5 Rattus norvegicus clone CH230-138F16, WO... 42 13 1
AC126525|AC126525.3 Rattus norvegicus clone CH230-48O3, *** ... 42 13 1
AQ950783|AQ950783.1 Sheared DNA-52C14.TF Sheared DNA Trypano... 42 13 1
AC073180|AC073180.3 Homo sapiens chromosome 2 clone RP13-486... 42 13 1
AL513525|AL513525.8 Human DNA sequence *** SEQUENCING CANCEL... 42 13 1
AC134926|AC134926.2 Oryza sativa (japonica cultivar-group) c... 42 13 1
AC098039|AC098039.6 Rattus norvegicus clone CH230-77D7, *** ... 42 13 1
BU721483|BU721483.1 SJM2BYD02 SJM Schistosoma japonicum cDNA... 42 13 1
AC106222|AC106222.5 Rattus norvegicus clone CH230-25J13, ***... 42 13 1
AL484659|AL484659.1 T. brucei sheared genomic DNA clone 291e... 42 13 1
BU802047|BU802047.1 SJFACD09 SJF Schistosoma japonicum cDNA,... 42 13 1
>X51892|X51892.1 Dictyostelium discoideum SP60 gene for spore coat
protein.
Length = 2370
Score = 866 bits (437), Expect(4) = 0.0
Identities = 437/437 (100%)
Strand = Plus / Plus
Query: 135 accaggtcatgaatgcaaacatgatgaacatggtaaagaatgttgcgttaaaaaacgtca 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1375 accaggtcatgaatgcaaacatgatgaacatggtaaagaatgttgcgttaaaaaacgtca 1434
Query: 195 tcatgatagatgtgacctcaaatgtaagagaggttatgaatgtaaaatcaaacatgatgg 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1435 tcatgatagatgtgacctcaaatgtaagagaggttatgaatgtaaaatcaaacatgatgg 1494
Query: 255 ctccaaatgttgtgtcaagagaactccaaagagaccatgttgtaaaccaaattcatgtgc 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1495 ctccaaatgttgtgtcaagagaactccaaagagaccatgttgtaaaccaaattcatgtgc 1554
Query: 315 cagagatgaaaaatgtgttgccaccaaagacagaatcatttgtgtaaaaccaacttgtga 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1555 cagagatgaaaaatgtgttgccaccaaagacagaatcatttgtgtaaaaccaacttgtga 1614
Query: 375 taatactcgttgtcctccaaattaccattgcatatgtggtgataaaattgatggtgtaaa 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1615 taatactcgttgtcctccaaattaccattgcatatgtggtgataaaattgatggtgtaaa 1674
Query: 435 atgtgttccagattgtaagaaagcaagatgtgatgatgtcgaatgtccagatttccatag 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1675 atgtgttccagattgtaagaaagcaagatgtgatgatgtcgaatgtccagatttccatag 1734
Query: 495 atgtgttgaaagacgtggtggtatcttaagttgtgaatttgatccaccaagacaaccaag 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1735 atgtgttgaaagacgtggtggtatcttaagttgtgaatttgatccaccaagacaaccaag 1794
Query: 555 atcccttgattgggctg 571
|||||||||||||||||
Sbjct: 1795 atcccttgattgggctg 1811
Score = 250 bits (126), Expect(4) = 0.0
Identities = 126/126 (100%)
Strand = Plus / Plus
Query: 728 gggacaatgataatgattggggtaatgattgggataatgattgggacaatgaagatggtg 787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1968 gggacaatgataatgattggggtaatgattgggataatgattgggacaatgaagatggtg 2027
Query: 788 ataattggaatgatgatgacttccaagatgcaaatgatgaatgggactattaagccatta 847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2028 ataattggaatgatgatgacttccaagatgcaaatgatgaatgggactattaagccatta 2087
Query: 848 attttt 853
||||||
Sbjct: 2088 attttt 2093
Score = 87.7 bits (44), Expect(4) = 0.0
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 1 attgtagtattttgttcatattcaaattaaatatcaatacaatt 44
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 attgtagtattttgttcatattcaaattaaatatcaatacaatt 446
Score = 79.8 bits (40), Expect(4) = 0.0
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 60 taaatttgtaaaatcaatttgtaacaaaaactagtaattt 99
||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 taaatttgtaaaatcaatttgtaacaaaaactagtaattt 657
Score = 44.1 bits (22), Expect(2) = 0.45
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 738 taatgattggggtaatgattgggataatga 767
||||||||||| |||||||||||| |||||
Sbjct: 1990 taatgattgggataatgattgggacaatga 2019
Score = 44.1 bits (22), Expect(4) = 1e-10
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 750 taatgattgggataatgattgggacaatga 779
||||||||||| |||||||||||| |||||
Sbjct: 1978 taatgattggggtaatgattgggataatga 2007
Score = 42.1 bits (21), Expect(4) = 1e-10
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 138 aggtcatgaatgcaaacatgatgaacatggtaaagaatgttgcgt 182
|||||||||||| ||| ||||||| |||||||||||||||||
Sbjct: 1177 aggtcatgaatgtaaagttgatgaatggggtaaagaatgttgcgt 1221
Score = 34.2 bits (17), Expect(4) = 1e-10
Identities = 23/25 (92%)
Strand = Plus / Plus
Query: 230 atgaatgtaaaatcaaacatgatgg 254
||||||| || ||||||||||||||
Sbjct: 1269 atgaatgcaagatcaaacatgatgg 1293
Score = 30.2 bits (15), Expect(4) = 1e-10
Identities = 15/15 (100%)
Strand = Plus / Plus
Query: 734 atgataatgattggg 748
|||||||||||||||
Sbjct: 1956 atgataatgattggg 1970
Score = 28.2 bits (14), Expect(2) = 0.45
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 139 ggtcatgaatgcaa 152
||||||||||||||
Sbjct: 1265 ggtcatgaatgcaa 1278
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 16,330,605
Number of Sequences: 30913623
Number of extensions: 16330605
Number of successful extensions: 1286213
Number of sequences better than 10.0: 150
length of query: 882
length of database: T,446,014,884
effective HSP length: 22
effective length of query: 860
effective length of database: S,765,915,178
effective search space: 30758687053080
effective search space used: 30758687053080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home