Dictyostelium discoideum cDNA Clone SFH171

Sequence SFH171

---------- AAGAAATCAN CAAAGTTGAA ACCGATCAAT TAACTCATCA
ATACACTTTG GTCATTTCAC CAGATAACAC CTACAAAGTA CTCGTCGATA
ACAAAGAGAT CCAAGCAGGT AACCTCGCTG ATGATTGGGA ATTACTTCCA
TCAAAACAAA TCAAAGATCC AAAACAATCC AAACCAGTCG ATTGGGTTGA
CGTAAAGGAA ATCGATGACC CAGAAGATGT TAAACCAGCC GGTCATGACG
ATATCCCAGC TTCAATCGTT GATCCAGAAG CTGTCAAACC AGAGGATTGG
AATGAAGAAG ACGACGGTGA ATGGGAAGCC CCAACCATCG CCAATCCAGA
ATACAAAGGT GAATGGAAAG CAAAGAAAAT CCCAAATCCA GAATACAAAG
GTGAATGGGT ACACCCATTA ATTGATAACC CAGAATACGC TGAAGACAAT
GAACTCTACC TCTTTAATGA TCTCGGTGCT ATCGGTTTCG AATTATGGCA
AGTTAAATCT GGTTCCATCT TTAACAATAT GATCGTCACC GACTCTGTCG
AAGAAGCTAA AGATTTCTCT GAAAAGACCT TTGTTGCCAA CCAAGAAGCC
GAAAAGAAAA TGTTTGACGA CCTCGAAGCC GCCAAAGCTG AAGAGAGAAA
GAAAGCTGAC GAAAAATTAG CTGCCGAAAA AGCTGCTGAA AAAGAAGCCG
AAGAAGCTGA TGAAGAAGAA GAAGAAGTCA AAAAATCAAC CAAAAAAGTN
ATCAGACGAA CTTTA

Translated Amino Acid Sequence SFH171

---EIXKVETDQLTHQYTLVISPDNTYKVLVDNKEIQAGNLADDWELLPSKQIKDPKQSK
PVDWVDVKEIDDPEDVKPAGHDDIPASIVDPEAVKPEDWNEEDDGEWEAPTIANPEYKGE
WKAKKIPNPEYKGEWVHPLIDNPEYAEDNELYLFNDLGAIGFELWQVKSGSIFNNMIVTD
SVEEAKDFSEKTFVANQEAEKKMFDDLEAAKAEERKKADEKLAAEKAAEKEAEEADEEEE
EVKKSTKKVIRRTL

Homology SFH171 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SFH171 (SFH171Q) /CSM/SF/SFH1-C/SFH171Q.Seq.d/                       1243   0.0
AFN528 (AFN528Q) /CSM/AF/AFN5-B/AFN528Q.Seq.d/                       1243   0.0
AFK286 (AFK286Q) /CSM/AF/AFK2-D/AFK286Q.Seq.d/                       1243   0.0
AFE410 (AFE410Q) /CSM/AF/AFE4-A/AFE410Q.Seq.d/                       1243   0.0
AFE318 (AFE318Q) /CSM/AF/AFE3-A/AFE318Q.Seq.d/                       1243   0.0
AFE168 (AFE168Q) /CSM/AF/AFE1-C/AFE168Q.Seq.d/                       1243   0.0
AFD463 (AFD463Q) /CSM/AF/AFD4-C/AFD463Q.Seq.d/                       1243   0.0
AFJ570 (AFJ570Q) /CSM/AF/AFJ5-C/AFJ570Q.Seq.d/                       1237   0.0
AFA657 (AFA657Q) /CSM/AF/AFA6-C/AFA657Q.Seq.d/                       1237   0.0
AFK245 (AFK245Q) /CSM/AF/AFK2-B/AFK245Q.Seq.d/                       1235   0.0

Homology SFH171 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


U36937|U36937.1 Dictyostelium discoideum calreticulin mRNA, ...  1235   0.0    2
BH160872|BH160872.1 ENTRI18TR Entamoeba histolytica Sheared ...    80   1e-15  3
AZ543757|AZ543757.1 ENTGD24TR Entamoeba histolytica Sheared ...    80   5e-11  1
AW626316|AW626316.1 EST320223 tomato radicle, 5 d post-imbib...    74   3e-09  1
BE459798|BE459798.1 EST415090 tomato developing/immature gre...    74   3e-09  1
AI782264|AI782264.1 EST263143 tomato susceptible, Cornell Ly...    74   3e-09  1
AW649196|AW649196.1 EST327650 tomato germinating seedlings, ...    74   3e-09  1
BE435540|BE435540.1 EST406618 tomato breaker fruit, TIGR Lyc...    74   3e-09  1
AW932476|AW932476.1 EST358319 tomato fruit mature green, TAM...    74   3e-09  1
AI771812|AI771812.1 EST252912 tomato ovary, TAMU Lycopersico...    74   3e-09  1

Homology SFH171 vs Protein

Sequences producing significant alignments:                      (bits) Value


U36937_1(U36937|pid:none) Dictyostelium discoideum calreticulin ...   390   e-107
FJ209028_1(FJ209028|pid:none) Lotharella amoeboformis calreticul...   256   1e-66
(Q9STD3) RecName: Full=Calreticulin; Flags: Precursor;  &AJ00076...   251   3e-65
(Q9XF98) RecName: Full=Calreticulin; Flags: Precursor;  &AF13473...   241   4e-62
AF283816_1(AF283816|pid:none) Pinus taeda calreticulin mRNA, com...   237   4e-61
AK318734_1(AK318734|pid:none) Arabidopsis thaliana AT1G56340 mRN...   237   5e-61
CP002684_6164(CP002684|pid:none) Arabidopsis thaliana chromosome...   237   5e-61
HC747518_1(HC747518|pid:none) Sequence 4609 from Patent WO201004...   235   2e-60
HC747478_1(HC747478|pid:none) Sequence 4569 from Patent WO201004...   235   2e-60
EF085019_1(EF085019|pid:none) Picea sitchensis clone WS0297_I16 ...   234   4e-60

Homology SFH171 vs Genome