Homology SFF706 vs Protein
Query= SFF706 (SFF706Q) /CSM/SF/SFF7-A/SFF706Q.Seq.d/
(1239 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF184886_1(AF184886|pid:none) Nicotiana tabacum LIM domain prote... 116 3e-24
GQ901953_1(GQ901953|pid:none) Hevea brasiliensis LIM1 mRNA, comp... 114 9e-24
AC135208_4(AC135208|pid:none) Oryza sativa (japonica cultivar-gr... 114 1e-23
EF035040_1(EF035040|pid:none) Populus tremula x Populus alba LIM... 114 2e-23
EF146377_1(EF146377|pid:none) Populus trichocarpa clone WS0117_L... 114 2e-23
AM469183_1(AM469183|pid:none) Vitis vinifera contig VV78X221882.... 114 2e-23
AC004665_22(AC004665|pid:none) Arabidopsis thaliana chromosome 2... 112 3e-23
EF148212_1(EF148212|pid:none) Populus trichocarpa clone WS0128_M... 112 3e-23
AK317129_1(AK317129|pid:none) Arabidopsis thaliana AT3G55770 mRN... 110 1e-22
EU496813_1(EU496813|pid:none) Nicotiana tabacum LIM domain prote... 109 3e-22
AF443117_1(AF443117|pid:none) Gossypium hirsutum LIM domain prot... 109 3e-22
AF116851_1(AF116851|pid:none) Nicotiana tabacum LIM domain prote... 107 1e-21
AC123899_21(AC123899|pid:none) Medicago truncatula clone mth2-33... 107 1e-21
AL137898_13(AL137898|pid:none) Arabidopsis thaliana DNA chromoso... 107 1e-21
BT061506_1(BT061506|pid:none) Zea mays full-length cDNA clone ZM... 106 3e-21
BT036854_1(BT036854|pid:none) Zea mays full-length cDNA clone ZM... 105 5e-21
BT039056_1(BT039056|pid:none) Zea mays full-length cDNA clone ZM... 104 9e-21
AB493659_1(AB493659|pid:none) Arabidopsis thaliana At3g61230 mRN... 104 1e-20
BT053270_1(BT053270|pid:none) Medicago truncatula clone MTYFP_FQ... 104 1e-20
BT068434_1(BT068434|pid:none) Zea mays full-length cDNA clone ZM... 103 2e-20
AF002109_4(AF002109|pid:none) Arabidopsis thaliana chromosome 2 ... 103 2e-20
AC009273_19(AC009273|pid:none) Sequence of BAC T1N6 from Arabido... 102 3e-20
EF082885_1(EF082885|pid:none) Picea sitchensis clone WS02728_E15... 102 3e-20
AK375771_1(AK375771|pid:none) Hordeum vulgare subsp. vulgare mRN... 102 5e-20
T50694(T50694) transcription factor L2 [imported] - Arabidopsis ... 101 8e-20
AF047353_1(AF047353|pid:none) Helianthus annuus LIM domain prote... 101 1e-19
AK317367_1(AK317367|pid:none) Arabidopsis thaliana AT1G01780 mRN... 101 1e-19
CP002686_5841(CP002686|pid:none) Arabidopsis thaliana chromosome... 99 4e-19
AK373010_1(AK373010|pid:none) Hordeum vulgare subsp. vulgare mRN... 99 5e-19
EF035036_1(EF035036|pid:none) Populus tremula x Populus alba str... 99 7e-19
EF035035_1(EF035035|pid:none) Populus tremula x Populus alba str... 98 1e-18
EF035037_1(EF035037|pid:none) Populus tremula x Populus alba LIM... 98 1e-18
BT091434_1(BT091434|pid:none) Soybean clone JCVI-FLGm-7P22 unkno... 96 3e-18
EF147317_1(EF147317|pid:none) Populus trichocarpa clone WS0122_J... 96 4e-18
BT091376_1(BT091376|pid:none) Soybean clone JCVI-FLGm-7H10 unkno... 96 6e-18
AF370574_1(AF370574|pid:none) Arabidopsis thaliana transcription... 94 2e-17
AC160095_6(AC160095|pid:none) Solanum lycopersicum clone BB, com... 93 3e-17
BT089473_1(BT089473|pid:none) Soybean clone JCVI-FLGm-2E17 unkno... 93 3e-17
AF197568_1(AF197568|pid:none) Nicotiana tabacum pollen specific ... 93 4e-17
BT092394_1(BT092394|pid:none) Soybean clone JCVI-FLGm-10H10 unkn... 92 5e-17
AF049917_1(AF049917|pid:none) Petunia x hybrida PGPS/D1 (PGPS/D1... 92 5e-17
BT089890_1(BT089890|pid:none) Soybean clone JCVI-FLGm-3G17 unkno... 92 6e-17
AB079513_1(AB079513|pid:none) Nicotiana tabacum Ntlim1 mRNA for ... 92 8e-17
EU186001_1(EU186001|pid:none) Lilium longiflorum LIM1 mRNA, comp... 91 1e-16
BT090223_1(BT090223|pid:none) Soybean clone JCVI-FLGm-3P4 unknow... 91 1e-16
EF035038_1(EF035038|pid:none) Populus tremula x Populus alba LIM... 91 1e-16
BT055434_1(BT055434|pid:none) Zea mays full-length cDNA clone ZM... 91 1e-16
AB079511_1(AB079511|pid:none) Populus kitakamiensis Pklim1 gene ... 91 1e-16
AM475696_4(AM475696|pid:none) Vitis vinifera contig VV78X042996.... 91 2e-16
AB023479_1(AB023479|pid:none) Nicotiana tabacum mRNA for transcr... 91 2e-16
BC172832_1(BC172832|pid:none) Synthetic construct Mus musculus c... 91 2e-16
AF184109_1(AF184109|pid:none) Nicotiana tabacum LIM domain prote... 90 2e-16
EF145390_1(EF145390|pid:none) Populus trichocarpa clone WS01124_... 90 3e-16
EF035039_1(EF035039|pid:none) Populus tremula x Populus alba LIM... 90 3e-16
EU957376_1(EU957376|pid:none) Zea mays clone 1590177 pollen-spec... 89 4e-16
EU962065_1(EU962065|pid:none) Zea mays clone 239982 pollen-speci... 89 5e-16
EF119718_1(EF119718|pid:none) Homo sapiens xeplin variant 2 (CMY... 89 7e-16
AK122889_1(AK122889|pid:none) Homo sapiens cDNA FLJ16539 fis, cl... 89 7e-16
AB097518_1(AB097518|pid:none) Macaca fascicularis brain cDNA clo... 88 9e-16
BC088558_1(BC088558|pid:none) Xenopus tropicalis hypothetical LO... 87 2e-15
AC125482_26(AC125482|pid:none) Medicago truncatula clone mth2-15... 87 2e-15
AF187103_1(AF187103|pid:none) Helianthus annuus LIM domain prote... 87 3e-15
(P29675) RecName: Full=Pollen-specific protein SF3; &AF187104_1... 87 3e-15
DQ213126_1(DQ213126|pid:none) Taeniopygia guttata clone 0058P002... 86 6e-15
EU966603_1(EU966603|pid:none) Zea mays clone 295565 unknown mRNA. 86 6e-15
AK085065_1(AK085065|pid:none) Mus musculus 13 days embryo lung c... 86 6e-15
AF187105_1(AF187105|pid:none) Helianthus annuus LIM domain prote... 85 8e-15
GQ165916_1(GQ165916|pid:none) TSA: Lycoris longituba LlTF-LIM-3 ... 85 8e-15
BC084208_1(BC084208|pid:none) Xenopus laevis hypothetical LOC495... 85 8e-15
BC121434_1(BC121434|pid:none) Xenopus tropicalis epithelial prot... 85 1e-14
(Q4KM31) RecName: Full=LIM domain-containing protein 2; &BC0988... 85 1e-14
AF116849_1(AF116849|pid:none) Helianthus annuus. 85 1e-14
GQ166106_1(GQ166106|pid:none) TSA: Lycoris longituba LlTF-LIM-8 ... 85 1e-14
AK031698_1(AK031698|pid:none) Mus musculus 13 days embryo male t... 84 2e-14
AK049350_1(AK049350|pid:none) Mus musculus ES cells cDNA, RIKEN ... 84 2e-14
AF307845_1(AF307845|pid:none) Mus musculus epithelial protein lo... 84 2e-14
(Q9ERG0) RecName: Full=LIM domain and actin-binding protein 1; A... 84 2e-14
(Q9BT23) RecName: Full=LIM domain-containing protein 2; &AK0923... 84 2e-14
(Q8BGB5) RecName: Full=LIM domain-containing protein 2; &AK0125... 84 2e-14
GQ165987_1(GQ165987|pid:none) TSA: Lycoris longituba LlTF-LIM-6 ... 84 2e-14
GQ165934_1(GQ165934|pid:none) TSA: Lycoris longituba LlTF-LIM-4 ... 83 3e-14
AJ721104_1(AJ721104|pid:none) Gallus gallus mRNA for hypothetica... 83 4e-14
BC001247_1(BC001247|pid:none) Homo sapiens LIM domain and actin ... 82 5e-14
AK000372_1(AK000372|pid:none) Homo sapiens cDNA FLJ20365 fis, cl... 82 5e-14
AF198455_1(AF198455|pid:none) Homo sapiens epithelial protein lo... 82 5e-14
AK096172_1(AK096172|pid:none) Homo sapiens cDNA FLJ38853 fis, cl... 82 5e-14
AB489164_1(AB489164|pid:none) Synthetic construct DNA, clone: pF... 82 5e-14
DQ364062_1(DQ364062|pid:none) Sus scrofa EPLIN-b mRNA, complete ... 82 5e-14
DQ364063_1(DQ364063|pid:none) Sus scrofa EPLIN-a mRNA, complete ... 82 5e-14
AB079512_1(AB079512|pid:none) Nicotiana tabacum Ntlim1 gene for ... 82 6e-14
BC096905_1(BC096905|pid:none) Danio rerio similar to Epithelial ... 81 1e-13
EU482903_1(EU482903|pid:none) Pinus taeda LIM2 transcription fac... 80 2e-13
AK319026_1(AK319026|pid:none) Arabidopsis thaliana AT3G55770 mRN... 80 2e-13
BT021808_1(BT021808|pid:none) Bos taurus hypothetical protein MG... 79 7e-13
BC135680_1(BC135680|pid:none) Xenopus tropicalis epithelial prot... 78 9e-13
BT062488_1(BT062488|pid:none) Zea mays full-length cDNA clone ZM... 75 6e-12
BT093203_1(BT093203|pid:none) Soybean clone JCVI-FLGm-17A9 unkno... 75 6e-12
GQ165886_1(GQ165886|pid:none) TSA: Lycoris longituba LlTF-LIM-2 ... 73 4e-11
GU575308_1(GU575308|pid:none) Solanum nigrum transcription facto... 72 9e-11
CP001328_545(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 70 3e-10
BT094606_1(BT094606|pid:none) Soybean clone JCVI-FLGm-14D2 unkno... 70 3e-10
BC047797_1(BC047797|pid:none) Danio rerio LIM domain and actin b... 69 6e-10
AM462939_1(AM462939|pid:none) Vitis vinifera contig VV78X214253.... 69 6e-10
EU976500_1(EU976500|pid:none) Zea mays clone 896310 unknown mRNA. 65 8e-09
DQ167188_1(DQ167188|pid:none) Brassica rapa putative transcripti... 58 1e-06
AB463553_1(AB463553|pid:none) Synthetic construct DNA, clone: pF... 57 2e-06
AF520713_1(AF520713|pid:none) Drosophila melanogaster MICAL shor... 55 1e-05
AF520714_1(AF520714|pid:none) Drosophila melanogaster MICAL medi... 55 1e-05
AE014297_1187(AE014297|pid:none) Drosophila melanogaster chromos... 55 1e-05
AE014297_1186(AE014297|pid:none) Drosophila melanogaster chromos... 55 1e-05
GQ165832_1(GQ165832|pid:none) TSA: Lycoris longituba LlTF-LIM-1 ... 54 2e-05
BT082241_1(BT082241|pid:none) Anoplopoma fimbria clone afim-evh-... 53 3e-05
BC083298_1(BC083298|pid:none) Danio rerio zgc:101840, mRNA (cDNA... 53 4e-05
AY555741_1(AY555741|pid:none) Homo sapiens LIM-only isoform A mR... 53 4e-05
HE601627_468(HE601627|pid:none) Schistosoma mansoni strain Puert... 52 5e-05
FN357451_41(FN357451|pid:none) Schistosoma mansoni genome sequen... 52 5e-05
BC159242_1(BC159242|pid:none) Danio rerio cysteine-rich protein ... 51 1e-04
BT001714_1(BT001714|pid:none) Drosophila melanogaster RE67887 fu... 51 1e-04
AY118632_1(AY118632|pid:none) Drosophila melanogaster RE73965 fu... 51 1e-04
AE014135_229(AE014135|pid:none) Drosophila melanogaster chromoso... 51 1e-04
AF520715_1(AF520715|pid:none) Drosophila melanogaster MICAL long... 50 2e-04
AK220353_1(AK220353|pid:none) Mus musculus mRNA for mKIAA0750 pr... 50 3e-04
(Q8BML1) RecName: Full=Protein MICAL-2; &AK030608_1(AK030608|pi... 50 3e-04
BC044391_1(BC044391|pid:none) Danio rerio cysteine-rich protein ... 50 3e-04
FN357691_3(FN357691|pid:none) Schistosoma mansoni genome sequenc... 50 3e-04
BC090651_1(BC090651|pid:none) Mus musculus microtubule associate... 49 6e-04
AB384532_1(AB384532|pid:none) Synthetic construct DNA, clone: pF... 49 6e-04
BX649444_1(BX649444|pid:none) Zebrafish DNA sequence from clone ... 49 6e-04
AY810688_1(AY810688|pid:none) Schistosoma japonicum SJCHGC02485 ... 49 6e-04
AB463198_1(AB463198|pid:none) Synthetic construct DNA, clone: pF... 49 6e-04
BC085009_1(BC085009|pid:none) Homo sapiens microtubule associate... 49 6e-04
BC157876_1(BC157876|pid:none) Homo sapiens microtubule associate... 49 6e-04
GU587948_1(GU587948|pid:none) Ictalurus furcatus clone CBZC1535 ... 49 8e-04
BX936423_2(BX936423|pid:none) Zebrafish DNA sequence from clone ... 49 8e-04
AF005862_1(AF005862|pid:none) Drosophila yakuba LIM domain prote... 49 8e-04
(Q9DCT8) RecName: Full=Cysteine-rich protein 2; Short=C... 48 0.001
AL929264_5(AL929264|pid:none) Zebrafish DNA sequence from clone ... 48 0.001
AK302893_1(AK302893|pid:none) Homo sapiens cDNA FLJ58714 complet... 48 0.001
AK302580_1(AK302580|pid:none) Homo sapiens cDNA FLJ58307 complet... 48 0.001
AB110785_1(AB110785|pid:none) Homo sapiens MICAL2PV1 mRNA for fl... 48 0.001
AB018293_1(AB018293|pid:none) Homo sapiens mRNA for KIAA0750 pro... 48 0.001
AK294845_1(AK294845|pid:none) Homo sapiens cDNA FLJ61246 complet... 48 0.001
(O94851) RecName: Full=Protein MICAL-2; &AB385380_1(AB385380|pi... 48 0.001
AB110786_1(AB110786|pid:none) Homo sapiens MICAL2PV2 mRNA for fl... 48 0.001
BX538021_1(BX538021|pid:none) Homo sapiens mRNA; cDNA DKFZp686H2... 48 0.001
BX641163_1(BX641163|pid:none) Homo sapiens mRNA; cDNA DKFZp686H0... 48 0.001
(P36201) RecName: Full=Cysteine-rich protein 2; Short=C... 47 0.002
BC090092_1(BC090092|pid:none) Xenopus tropicalis MGC97606 protei... 47 0.002
FN357691_4(FN357691|pid:none) Schistosoma mansoni genome sequenc... 47 0.003
BC076911_1(BC076911|pid:none) Xenopus tropicalis cysteine and gl... 46 0.004
DQ215372_1(DQ215372|pid:none) Taeniopygia guttata clone 0058P001... 45 0.007
JP286315_1(JP286315|pid:none) TSA: Pipa carvalhoi Pipa_carvalhoi... 45 0.007
FN357583_5(FN357583|pid:none) Schistosoma mansoni genome sequenc... 45 0.007
(Q9BIW5) RecName: Full=LIM domain-containing protein C; &AF3484... 45 0.007
FN314698_1(FN314698|pid:none) Schistosoma japonicum isolate Anhu... 45 0.007
(Q0VFX8) RecName: Full=Cysteine-rich protein 2; Short=C... 45 0.009
AF272888_1(AF272888|pid:none) Xenopus laevis LIM protein mRNA, c... 45 0.011
BC083395_1(BC083395|pid:none) Danio rerio cysteine and glycine-r... 45 0.011
BT058365_1(BT058365|pid:none) Salmo salar clone Contig4490 Cyste... 44 0.015
DQ215368_1(DQ215368|pid:none) Taeniopygia guttata clone 0063P002... 44 0.015
BT049834_1(BT049834|pid:none) Salmo salar clone ssal-evd-530-178... 44 0.015
(O60952) RecName: Full=LIM domain-containing protein E; AltName:... 44 0.019
GU588188_1(GU588188|pid:none) Ictalurus furcatus clone CBZF12517... 44 0.019
BT046510_1(BT046510|pid:none) Salmo salar clone ssal-eve-578-236... 44 0.019
DQ215370_1(DQ215370|pid:none) Taeniopygia guttata clone 0058P002... 44 0.025
FN314699_1(FN314699|pid:none) Schistosoma japonicum isolate Anhu... 44 0.025
CR760512_1(CR760512|pid:none) Xenopus tropicalis finished cDNA, ... 43 0.033
(Q62908) RecName: Full=Cysteine and glycine-rich protein 2; AltN... 43 0.033
(P52943) RecName: Full=Cysteine-rich protein 2; Short=C... 43 0.033
AY891159_1(AY891159|pid:none) Synthetic construct Homo sapiens c... 43 0.033
BT048524_1(BT048524|pid:none) Salmo salar clone ssal-eve-547-255... 43 0.043
Y17313_1(Y17313|pid:none) Oncorhynchus mykiss mRNA forcystein-ri... 43 0.043
AY810685_1(AY810685|pid:none) Schistosoma japonicum SJCHGC02486 ... 42 0.056
(P50460) RecName: Full=Cysteine and glycine-rich protein 2; AltN... 42 0.073
BT046266_1(BT046266|pid:none) Salmo salar clone ssal-evd-562-178... 42 0.073
BC081064_1(BC081064|pid:none) Xenopus laevis MGC81964 protein, m... 42 0.073
(P34416) RecName: Full=LIM and SH3 domain protein F42H10.3; &L0... 42 0.095
S44651(S44651)f42h10.4 protein - Caenorhabditis elegans 42 0.095
AK003328_1(AK003328|pid:none) Mus musculus 18-day embryo whole b... 42 0.095
(P97314) RecName: Full=Cysteine and glycine-rich protein 2; AltN... 42 0.095
HM151010_1(HM151010|pid:none) Danio rerio clone 55983 7-3 molecu... 42 0.095
BT046707_1(BT046707|pid:none) Salmo salar clone ssal-evd-508-234... 42 0.095
(Q8I7C3) RecName: Full=LIM and SH3 domain protein Lasp; &AE0142... 41 0.12
AJ294538_1(AJ294538|pid:none) Drosophila melanogaster mRNA for L... 41 0.12
BC078530_1(BC078530|pid:none) Xenopus laevis MGC85360 protein, m... 41 0.12
BC090913_1(BC090913|pid:none) Danio rerio zgc:103738, mRNA (cDNA... 41 0.12
AE014296_3134(AE014296|pid:none) Drosophila melanogaster chromos... 41 0.12
JI172239_1(JI172239|pid:none) TSA: Ascaris suum ASCF_5727_1490 m... 41 0.16
BC078491_1(BC078491|pid:none) Xenopus laevis MGC85263 protein, m... 41 0.16
AK012647_1(AK012647|pid:none) Mus musculus 10, 11 days embryo wh... 41 0.16
JI170635_1(JI170635|pid:none) TSA: Ascaris suum ASCF_4722_1731 m... 41 0.16
(Q05158) RecName: Full=Cysteine and glycine-rich protein 2; AltN... 41 0.16
(Q16527) RecName: Full=Cysteine and glycine-rich protein 2; AltN... 41 0.16
AK342987_1(AK342987|pid:none) Acyrthosiphon pisum ACYPI006302 mR... 41 0.16
AE013599_4277(AE013599|pid:none) Drosophila melanogaster chromos... 40 0.21
AK300092_1(AK300092|pid:none) Homo sapiens cDNA FLJ56946 complet... 40 0.21
EU014896_1(EU014896|pid:none) Cyathostominae sp. JM-2007a LIM do... 40 0.21
BT046142_1(BT046142|pid:none) Drosophila melanogaster FI08059 fu... 40 0.21
BT075050_1(BT075050|pid:none) Osmerus mordax clone omor-rgc-518-... 40 0.21
BT011157_1(BT011157|pid:none) Drosophila melanogaster AT24473 fu... 40 0.21
(P97315) RecName: Full=Cysteine and glycine-rich protein 1; AltN... 40 0.28
(P47875) RecName: Full=Cysteine and glycine-rich protein 1; AltN... 40 0.28
JC2431(JC2431) cysteine-rich protein 1 - human &U09770_1(U09770... 40 0.28
GU988676_1(GU988676|pid:none) Epinephelus coioides cysteine-rich... 40 0.28
(Q5RCT4) RecName: Full=Cysteine and glycine-rich protein 1; AltN... 40 0.36
BT056884_1(BT056884|pid:none) Salmo salar clone ssal-rgb2-651-15... 40 0.36
AK131508_1(AK131508|pid:none) Homo sapiens cDNA FLJ16726 fis, cl... 40 0.36
AK302237_1(AK302237|pid:none) Homo sapiens cDNA FLJ61189 complet... 40 0.36
AK290133_1(AK290133|pid:none) Homo sapiens cDNA FLJ77815 complet... 40 0.36
(P21291) RecName: Full=Cysteine and glycine-rich protein 1; AltN... 40 0.36
AB443439_1(AB443439|pid:none) Gryllus bimaculatus Rassf mRNA for... 40 0.36
DQ400409_1(DQ400409|pid:none) Oncorhynchus mykiss cysteine- and ... 40 0.36
AY890824_1(AY890824|pid:none) Synthetic construct Homo sapiens c... 40 0.36
(P63254) RecName: Full=Cysteine-rich protein 1; Short=C... 39 0.62
AY894990_1(AY894990|pid:none) Danio rerio LIM homeodomain protei... 39 0.62
FJ494917_1(FJ494917|pid:none) Sus scrofa cysteine and glycine-ri... 39 0.62
BT068142_1(BT068142|pid:none) Zea mays full-length cDNA clone ZM... 39 0.62
AY915415_1(AY915415|pid:none) Schistosoma japonicum SJCHGC06247 ... 39 0.62
AY551078_1(AY551078|pid:none) Danio rerio LIM homeodomain protei... 39 0.62
AK088267_1(AK088267|pid:none) Mus musculus 2 days neonate thymus... 39 0.62
JI173895_1(JI173895|pid:none) TSA: Ascaris suum ASCF_6592_1309 m... 39 0.81
HQ328939_1(HQ328939|pid:none) Paralichthys olivaceus cysteine-ri... 39 0.81
(Q56K04) RecName: Full=Cysteine-rich protein 1; Short=C... 39 0.81
(P50463) RecName: Full=Cysteine and glycine-rich protein 3; AltN... 39 0.81
JI169444_1(JI169444|pid:none) TSA: Ascaris suum ASCF_3926_1964 m... 38 1.1
CP001576_458(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 38 1.1
AY813079_1(AY813079|pid:none) Schistosoma japonicum SJCHGC07563 ... 38 1.1
AF121260_1(AF121260|pid:none) Homo sapiens myogenic factor LIM3 ... 38 1.1
BC064074_1(BC064074|pid:none) Mus musculus cysteine-rich protein... 38 1.1
(P50461) RecName: Full=Cysteine and glycine-rich protein 3; AltN... 38 1.1
BC077045_1(BC077045|pid:none) Xenopus tropicalis cysteine and gl... 38 1.4
AB114207_1(AB114207|pid:none) Gallus gallus lasp-2 mRNA for LIM ... 38 1.4
AK004645_1(AK004645|pid:none) Mus musculus adult male lung cDNA,... 38 1.4
AB209311_1(AB209311|pid:none) Homo sapiens mRNA for nebulette no... 38 1.4
AB528969_1(AB528969|pid:none) Synthetic construct DNA, clone: pF... 38 1.4
BC156027_1(BC156027|pid:none) Xenopus tropicalis hypothetical pr... 38 1.4
AE014297_3615(AE014297|pid:none) Drosophila melanogaster chromos... 37 1.8
AY815967_1(AY815967|pid:none) Schistosoma japonicum SJCHGC02224 ... 37 1.8
BC081239_1(BC081239|pid:none) Xenopus laevis MGC85577 protein, m... 37 1.8
BC086356_1(BC086356|pid:none) Rattus norvegicus cysteine and gly... 37 1.8
AK132669_1(AK132669|pid:none) Mus musculus adult male testis cDN... 37 1.8
PDBN(1B8T)A MOL_ID: 1;MOL_ID: 1; MOLECULE: CRP1; MOLECULE: CRP1;... 37 1.8
AF067210_1(AF067210|pid:none) Caenorhabditis elegans cosmid C04F... 37 1.8
BC138257_1(BC138257|pid:none) Mus musculus microtubule associate... 37 1.8
AX885748_1(AX885748|pid:none) Sequence 1611 from Patent EP1033401. 37 2.3
AE014297_1121(AE014297|pid:none) Drosophila melanogaster chromos... 37 2.3
AB209756_1(AB209756|pid:none) Homo sapiens mRNA for cysteine and... 37 2.3
AE014297_1112(AE014297|pid:none) Drosophila melanogaster chromos... 37 2.3
AE014297_1113(AE014297|pid:none) Drosophila melanogaster chromos... 37 2.3
S29392(S29392)estradiol-stimulated protein ESP1 - rat 37 2.3
AE014297_1122(AE014297|pid:none) Drosophila melanogaster chromos... 37 2.3
AE014297_1114(AE014297|pid:none) Drosophila melanogaster chromos... 37 2.3
BT078787_1(BT078787|pid:none) Esox lucius clone eluc-evq-530-347... 37 3.1
BC065956_1(BC065956|pid:none) Danio rerio cysteine and glycine-r... 37 3.1
BC129417_1(BC129417|pid:none) Danio rerio zgc:158737, mRNA (cDNA... 37 3.1
BT120646_1(BT120646|pid:none) Lepeophtheirus salmonis clone lsal... 37 3.1
GQ166159_1(GQ166159|pid:none) TSA: Lycoris longituba LlTF-LIM-9 ... 37 3.1
BT078194_1(BT078194|pid:none) Lepeophtheirus salmonis Pacific fo... 37 3.1
BT120267_1(BT120267|pid:none) Drosophila melanogaster MIP17117 f... 37 3.1
JI166928_1(JI166928|pid:none) TSA: Ascaris suum ASCP_877_2696 mR... 37 3.1
BT082231_1(BT082231|pid:none) Anoplopoma fimbria clone afim-evh-... 36 4.0
AK173040_1(AK173040|pid:none) Mus musculus mRNA for mKIAA0843 pr... 36 4.0
AM392844_1(AM392844|pid:none) Synthetic construct Mus musculus c... 36 4.0
EU247119_1(EU247119|pid:none) Lycosa singoriensis cysteine and g... 36 4.0
FO081217_3(FO081217|pid:none) Caenorhabditis elegans Cosmid T04C... 36 4.0
AB182287_1(AB182287|pid:none) Ciona intestinalis mRNA for lasp, ... 36 4.0
FJ494918_1(FJ494918|pid:none) Sus scrofa cysteine and glycine-ri... 36 4.0
BC142519_1(BC142519|pid:none) Bos taurus actin binding LIM prote... 36 4.0
EZ422453_1(EZ422453|pid:none) TSA: Glossina morsitans morsitans ... 36 4.0
AM393284_1(AM393284|pid:none) Synthetic construct Homo sapiens c... 36 5.2
DQ431040_1(DQ431040|pid:none) Saccoglossus kowalevskii lim domai... 36 5.2
DQ413174_1(DQ413174|pid:none) Homo sapiens actin-binding LIM pro... 36 5.2
AM393524_1(AM393524|pid:none) Synthetic construct Homo sapiens c... 36 5.2
AK138935_1(AK138935|pid:none) Mus musculus adult male aorta and ... 36 5.2
AM392595_1(AM392595|pid:none) Synthetic construct Homo sapiens c... 36 5.2
AM393563_1(AM393563|pid:none) Synthetic construct Homo sapiens c... 36 5.2
(O94929) RecName: Full=Actin-binding LIM protein 3; Sho... 36 5.2
BT049624_1(BT049624|pid:none) Salmo salar clone ssal-eve-524-233... 36 5.2
AM392963_1(AM392963|pid:none) Synthetic construct Homo sapiens c... 36 5.2
CR860826_1(CR860826|pid:none) Pongo abelii mRNA; cDNA DKFZp469A2... 36 5.2
AM393655_1(AM393655|pid:none) Synthetic construct Homo sapiens c... 36 5.2
AM393559_1(AM393559|pid:none) Synthetic construct Homo sapiens c... 36 5.2
AM393554_1(AM393554|pid:none) Synthetic construct Homo sapiens c... 36 5.2
AM393116_1(AM393116|pid:none) Synthetic construct Homo sapiens c... 36 5.2
CR388093_5(CR388093|pid:none) Zebrafish DNA sequence from clone ... 36 5.2
BC044681_1(BC044681|pid:none) Xenopus laevis LIM and SH3 protein... 36 5.2
AM393820_1(AM393820|pid:none) Synthetic construct Homo sapiens c... 36 5.2
FN357690_8(FN357690|pid:none) Schistosoma mansoni genome sequenc... 36 5.2
AM393099_1(AM393099|pid:none) Synthetic construct Homo sapiens c... 36 5.2
BC066574_1(BC066574|pid:none) Danio rerio LIM and SH3 protein 1,... 36 5.2
AM392930_1(AM392930|pid:none) Synthetic construct Homo sapiens c... 36 5.2
AM393401_1(AM393401|pid:none) Synthetic construct Homo sapiens c... 36 5.2
AM392998_1(AM392998|pid:none) Synthetic construct Homo sapiens c... 36 5.2
FN317368_1(FN317368|pid:none) Schistosoma japonicum isolate Anhu... 35 6.8
GU988675_1(GU988675|pid:none) Epinephelus coioides cysteine and ... 35 6.8
GU588151_1(GU588151|pid:none) Ictalurus furcatus clone CBZC9761 ... 35 6.8
FN357546_6(FN357546|pid:none) Schistosoma mansoni genome sequenc... 35 6.8
AY461436_1(AY461436|pid:none) Bombyx mori Lim protein mRNA, comp... 35 6.8
AY113460_1(AY113460|pid:none) Drosophila melanogaster RE37250 fu... 35 8.9
DQ445509_1(DQ445509|pid:none) Graphocephala atropunctata isolate... 35 8.9
(Q8UVR3) RecName: Full=LIM homeobox transcription factor 1-beta.... 35 8.9
AE014296_3182(AE014296|pid:none) Drosophila melanogaster chromos... 35 8.9
AE014296_3180(AE014296|pid:none) Drosophila melanogaster chromos... 35 8.9
AY156993_1(AY156993|pid:none) Hirudo medicinalis cysteine-rich i... 35 8.9
AE014296_3181(AE014296|pid:none) Drosophila melanogaster chromos... 35 8.9
AE014296_3172(AE014296|pid:none) Drosophila melanogaster chromos... 35 8.9
BC084378_1(BC084378|pid:none) Xenopus laevis hypothetical LOC495... 35 8.9
AY894989_1(AY894989|pid:none) Danio rerio LIM homeodomain protei... 35 8.9
AY551077_1(AY551077|pid:none) Danio rerio LIM homeodomain protei... 35 8.9
DQ213197_1(DQ213197|pid:none) Taeniopygia guttata clone 0058P005... 35 8.9
>AF184886_1(AF184886|pid:none) Nicotiana tabacum LIM domain protein
WLIM2 (WLIM2) gene, complete cds. &T03400(T03400)
&Y11002_1(Y11002|pid:none)
Length = 189
Score = 116 bits (290), Expect = 3e-24
Identities = 66/194 (34%), Positives = 89/194 (45%), Gaps = 1/194 (0%)
Frame = +1
Query: 100 GTQEKCTACAKTVYLTXXXXXXXXXXXXTFXXXXXXXXXXXXXXSLGNYASLNGVFYCKP 279
GTQ+KC AC KTVY + L N++S+ GV YCKP
Sbjct: 5 GTQQKCKACEKTVY----PVELLSADGVNYHKSCFKCSHCKGTLKLSNFSSMEGVLYCKP 60
Query: 280 HFKQLFATKGNYDEGF-GKSKHSEKWTPQATPTGTSSFIPVXXXXXXXXXXXXXXXXXXF 456
HF+QLF GN+++ F +K +EK TP+ T + + + F
Sbjct: 61 HFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKA-------------------AGMF 101
Query: 457 SGSTEKCNFCNKTVYLTXXXXXXXXXXXXXLHKQCLKCTHCSVVLNLGTYASMKGVFYCK 636
SG+ EKC C KT Y HK C KC+H L+ YA++ G+ YCK
Sbjct: 102 SGTQEKCATCGKTAY----PLEKVTVENQSYHKTCFKCSHGGCSLSPSNYAALNGILYCK 157
Query: 637 PHFKQLFATKGNYD 678
PHF QLF KG+Y+
Sbjct: 158 PHFSQLFKEKGSYN 171
Score = 80.1 bits (196), Expect = 2e-13
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +1
Query: 454 FSGSTEKCNFCNKTVYLTXXXXXXXXXXXXXLHKQCLKCTHCSVVLNLGTYASMKGVFYC 633
F G+ +KC C KTVY HK C KC+HC L L ++SM+GV YC
Sbjct: 3 FIGTQQKCKACEKTVY----PVELLSADGVNYHKSCFKCSHCKGTLKLSNFSSMEGVLYC 58
Query: 634 KPHFKQLFATKGNYDESFGN-TKAXDKWAPQ 723
KPHF+QLF GN++++F + K+ +K P+
Sbjct: 59 KPHFEQLFKESGNFNKNFQSPAKSAEKLTPE 89
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 2,020,442,434
Number of extensions: 33099196
Number of successful extensions: 90159
Number of sequences better than 10.0: 310
Number of HSP's gapped: 89572
Number of HSP's successfully gapped: 473
Length of query: 413
Length of database: 1,732,582,204
Length adjustment: 134
Effective length of query: 279
Effective length of database: 1,015,787,662
Effective search space: 283404757698
Effective search space used: 283404757698
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home