Homology SFF706 vs DNA
Query= SFF706 (SFF706Q) /CSM/SF/SFF7-A/SFF706Q.Seq.d/
(1239 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; /db/DDBJNEW.DATA/b/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrt.seq; ddbjinv1.seq;
ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
/db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq;
ddbjvrl3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss7.seq;
ddbjgss8.seq; ddbjgss9.seq; /db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss2.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss3.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; /db/DDBJNEW.DATA/b/new_ddbjhtg1.seq;
ddbjpat1.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq;
ddbjpat6.seq; ddbjpat7.seq; ddbjpat8.seq;
/db/DDBJNEW.DATA/b/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; /db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq; est_crei1.seq;
/db/DDBJNEW.DATA/b/new_est_crei1.seq; est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/b/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/b/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/b/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/b/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/b/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/b/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_stro1.seq;
/db/DDBJNEW.DATA/b/new_est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/b/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
/db/DDBJNEW.DATA/b/new_est_rest1.seq
30,679,270 sequences; T,251,742,201 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value N
AC117076|AC117076.2 Dictyostelium discoideum chromosome 2 ma... 34 0.003 12
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma... 38 0.007 12
AE014848|AE014848.1 Plasmodium falciparum 3D7 chromosome 12,... 36 0.010 11
AE014821|AE014821.1 Plasmodium falciparum 3D7 chromosome 14 ... 34 0.010 11
BI747172|BI747172.1 rm36g08.y1 Meloidogyne arenaria egg pAMP... 42 0.017 2
BE858201|BE858201.1 7g19d02.x1 NCI_CGAP_Brn23 Homo sapiens c... 52 0.019 1
AL929351|AL929351.1 Plasmodium falciparum strain 3D7, chromo... 34 0.020 14
AC006279|AC006279.8 Plasmodium falciparum chromosome 12 clon... 36 0.025 11
AE014852|AE014852.2 Plasmodium falciparum 3D7 chromosome 12,... 36 0.039 11
BI504534|BI504534.1 BB170004B20D05.5 Bee Brain Normalized/Su... 38 0.057 2
AC116978|AC116978.1 Dictyostelium discoideum chromosome 2 ma... 34 0.063 6
AC104617|AC104617.8 Trypanosoma brucei chromosome V clone RP... 34 0.074 8
Z37981|Z37981.1 D.discoideum gene for protein kinase. 28 0.084 6
AE014818|AE014818.1 Plasmodium falciparum 3D7 chromosome 14 ... 36 0.085 11
BX511266|BX511266.4 Zebrafish DNA sequence *** SEQUENCING IN... 38 0.086 8
BX470223|BX470223.13 Zebrafish DNA sequence from clone DKEY-... 34 0.20 11
AC140323|AC140323.1 Mus musculus chromosome UNK clone RP24-3... 38 0.21 9
AC005964|AC005964.1 Arabidopsis thaliana chromosome V map 60... 34 0.28 8
BU904505|BU904505.1 AGENCOURT_10155025 NICHD_XGC_Kid1 Xenopu... 38 0.37 2
AC127428|AC127428.27 Medicago truncatula clone mth2-36c19, W... 32 0.38 14
AL953863|AL953863.13 Zebrafish DNA sequence from clone CH211... 34 0.47 7
AC128255|AC128255.2 Rattus norvegicus clone CH230-42J13, ***... 34 0.52 9
AC115598|AC115598.2 Dictyostelium discoideum chromosome 2 ma... 38 0.55 9
AC004153|AC004153.7 Plasmodium falciparum chromosome 12 clon... 36 0.55 10
AC116119|AC116119.12 Mus musculus chromosome 12, clone RP23-... 32 0.56 9
AE014849|AE014849.1 Plasmodium falciparum 3D7 chromosome 12,... 38 0.61 11
AL844506|AL844506.1 Plasmodium falciparum chromosome 7. 36 0.65 17
AC101834|AC101834.4 Mus musculus clone RP24-497O17, WORKING ... 34 0.66 10
AX602201|AX602201.1 Sequence 130 from Patent WO02092818. 38 0.67 8
BX571790|BX571790.7 Zebrafish DNA sequence *** SEQUENCING IN... 36 0.71 8
CF662033|CF662033.1 CcLX13a40f13f1 Carp mixed tissue library... 34 0.78 2
AG251083|AG251083.1 Lotus corniculatus var. japonicus DNA, c... 34 0.80 2
AC144766|AC144766.11 Medicago truncatula clone mth2-17c2, WO... 34 0.82 8
AP004958|AP004958.1 Lotus corniculatus var. japonicus genomi... 38 0.90 6
AC137615|AC137615.1 Oryza sativa (japonica cultivar-group) c... 38 0.94 3
AE014829|AE014829.1 Plasmodium falciparum 3D7 chromosome 10 ... 32 1.0 14
AL158155|AL158155.24 Human DNA sequence from clone RP11-397D... 46 1.2 1
CA990760|CA990760.1 EST644268 GESD Medicago truncatula cDNA ... 46 1.2 1
AC024283|AC024283.2 Homo sapiens clone RP11-20O4, WORKING DR... 46 1.2 1
BI142917|BI142917.1 rk76b12.y1 Meloidogyne javanica egg pAMP... 46 1.2 1
AL844507|AL844507.1 Plasmodium falciparum chromosome 8. 36 1.3 23
U23529|U23529.1 Caenorhabditis elegans cosmid C15B12, comple... 34 1.3 5
BX569785|BX569785.3 Zebrafish DNA sequence *** SEQUENCING IN... 34 1.4 10
AC132420|AC132420.3 Mus musculus chromosome UNK clone RP23-2... 30 1.5 10
BM165976|BM165976.1 EST568499 PyBS Plasmodium yoelii yoelii ... 30 1.5 3
AL360354|AL360354.1 Plasmodium vivax telomeric YAC clone, co... 34 1.5 8
AC124514|AC124514.2 Mus musculus chromosome UNK clone RP23-4... 42 1.6 5
BX322647|BX322647.2 Zebrafish DNA sequence *** SEQUENCING IN... 36 1.8 10
AE014832|AE014832.1 Plasmodium falciparum 3D7 chromosome 10 ... 32 2.0 12
AC092812|AC092812.2 Homo sapiens chromosome 1 clone RP11-536... 36 2.1 6
AE014820|AE014820.1 Plasmodium falciparum 3D7 chromosome 14 ... 34 2.1 2
AC141570|AC141570.3 Rattus norvegicus clone CH230-197C11, WO... 32 2.2 2
AC108040|AC108040.2 Homo sapiens chromosome 4 clone RP11-210... 34 2.2 9
AC120547|AC120547.7 Mus musculus chromosome 8, clone RP23-24... 32 2.2 10
AL929357|AL929357.1 Plasmodium falciparum strain 3D7, chromo... 36 2.3 12
Z54342|Z54342.1 Caenorhabditis elegans cosmid C08H9. 32 2.4 2
AC084488|AC084488.1 Caenorhabditis briggsae cosmid G05J05, c... 32 2.4 6
CG101472|CG101472.1 PUJAZ85TB ZM_0.6_1.0_KB Zea mays genomic... 36 2.4 3
AF316500|AF316500.1 Leptospira interrogans strain L170 rfb l... 34 2.4 7
AC108625|AC108625.5 Rattus norvegicus clone CH230-64A14, WOR... 34 2.5 8
AL034557|AL034557.8 Plasmodium falciparum MAL4P1. 34 2.6 12
AL929359|AL929359.1 Plasmodium falciparum strain 3D7, chromo... 32 2.7 14
BX120011|BX120011.5 Zebrafish DNA sequence *** SEQUENCING IN... 32 2.7 10
AL035475|AL035475.7 Plasmodium falciparum MAL4P2. 34 2.8 11
AC044896|AC044896.3 Homo sapiens chromosome 2 clone RP11-598... 34 2.8 7
AE014843|AE014843.1 Plasmodium falciparum 3D7 chromosome 11 ... 32 2.9 12
AL035476|AL035476.7 Plasmodium falciparum MAL4P3. 32 2.9 13
BX544872|BX544872.3 Zebrafish DNA sequence *** SEQUENCING IN... 34 3.0 8
AW333148|AW333148.1 S17H7 AGS-1 Pneumocystis carinii cDNA 3'... 40 3.1 2
AP005467|AP005467.3 Oryza sativa (japonica cultivar-group) g... 34 3.1 10
AE014839|AE014839.1 Plasmodium falciparum 3D7 chromosome 11 ... 36 3.2 9
AP001390|AP001390.2 Homo sapiens genomic DNA, chromosome 18q... 34 3.2 9
AC130836|AC130836.4 Mus musculus chromosome UNK clone RP24-1... 38 3.3 7
AL929240|AL929240.14 Mouse DNA sequence *** SEQUENCING IN PR... 42 3.4 8
AE014836|AE014836.1 Plasmodium falciparum 3D7 chromosome 11 ... 32 3.5 13
AE001182|AE001182.1 Borrelia burgdorferi B31 (section 68 of ... 36 3.5 2
AC107229|AC107229.4 Mus musculus clone RP23-227D10, WORKING ... 42 3.6 4
AE001775|AE001775.1 Thermotoga maritima section 87 of 136 of... 36 3.6 3
AC111321|AC111321.8 Rattus norvegicus 4 BAC CH230-241A9 (Chi... 38 3.6 8
AC124317|AC124317.1 Homo sapiens chromosome 17 clone CTD-205... 36 3.6 5
AC146294|AC146294.1 Danio rerio clone CH211-51I11, WORKING D... 34 3.7 10
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma... 32 3.8 14
AP001149|AP001149.3 Homo sapiens genomic DNA, chromosome 11q... 38 4.0 9
AC117710|AC117710.3 Mus musculus clone RP23-480H15, WORKING ... 32 4.2 10
AE014841|AE014841.1 Plasmodium falciparum 3D7 chromosome 11 ... 34 4.3 10
AC106842|AC106842.3 Mus musculus clone RP24-165F13, WORKING ... 38 4.4 6
AC012580|AC012580.3 Homo sapiens clone RP11-2L22, WORKING DR... 36 4.4 7
AC064878|AC064878.9 Homo sapiens chromosome 6 clone RP11-13I... 38 4.5 7
AL731623|AL731623.3 Oryza sativa genomic DNA, chromosome 4, ... 44 4.5 6
AC126019|AC126019.15 Medicago truncatula clone mth2-22p22, c... 34 4.6 9
AL357144|AL357144.11 Human DNA sequence *** SEQUENCING CANCE... 44 4.6 1
AC133934|AC133934.1 Mus musculus chromosome UNK clone RP24-3... 44 4.6 1
AI831293|AI831293.1 wj82a03.x1 NCI_CGAP_Lym12 Homo sapiens c... 44 4.6 1
AC115339|AC115339.6 Rattus norvegicus clone CH230-248H13, **... 44 4.6 1
BX136284|BX136284.1 Danio rerio genomic clone DKEY-97L16, ge... 44 4.6 1
AC011546|AC011546.6 Homo sapiens chromosome 19 clone LLNLR-2... 44 4.6 1
AL133598|AL133598.1 Homo sapiens mRNA; cDNA DKFZp434H052 (fr... 44 4.6 1
AC099001|AC099001.5 Rattus norvegicus clone CH230-117H12, **... 44 4.6 1
BZ788328|BZ788328.1 PUFJP10TB ZM_0.6_1.0_KB Zea mays genomic... 44 4.6 1
AC108018|AC108018.3 Homo sapiens BAC clone RP11-4E12 from 4,... 44 4.6 1
>AC117076|AC117076.2 Dictyostelium discoideum chromosome 2 map
5862124-6045772 strain AX4, complete sequence.
Length = 183648
Score = 34.2 bits (17), Expect(12) = 0.003
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 163 gaagataaagaagataa 179
|||||||||||||||||
Sbjct: 167810 gaagataaagaagataa 167794
Score = 34.2 bits (17), Expect(12) = 0.003
Identities = 17/17 (100%)
Strand = Plus / Minus
Query: 406 tcaaaatcatcagaaaa 422
|||||||||||||||||
Sbjct: 84664 tcaaaatcatcagaaaa 84648
Score = 32.2 bits (16), Expect(12) = 0.003
Identities = 16/16 (100%)
Strand = Plus / Minus
Query: 37 attttttttagaaaaa 52
||||||||||||||||
Sbjct: 183644 attttttttagaaaaa 183629
Score = 28.2 bits (14), Expect(12) = 0.003
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 370 ccaactggtacttc 383
||||||||||||||
Sbjct: 23069 ccaactggtacttc 23082
Score = 28.2 bits (14), Expect(12) = 0.003
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 553 aaacaatgtttgaa 566
||||||||||||||
Sbjct: 67627 aaacaatgtttgaa 67614
Score = 28.2 bits (14), Expect(12) = 0.003
Identities = 23/26 (88%)
Strand = Plus / Plus
Query: 20 tttctatatatagataaatttttttt 45
|||| ||||| | |||||||||||||
Sbjct: 15492 tttcaatataaaaataaatttttttt 15517
Score = 28.2 bits (14), Expect(12) = 0.003
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 429 aacaccaacaacaa 442
||||||||||||||
Sbjct: 82200 aacaccaacaacaa 82187
Score = 28.2 bits (14), Expect(12) = 0.003
Identities = 14/14 (100%)
Strand = Plus / Plus
Query: 900 tcatctgaatctga 913
||||||||||||||
Sbjct: 49670 tcatctgaatctga 49683
Score = 26.3 bits (13), Expect(12) = 0.003
Identities = 16/17 (94%)
Strand = Plus / Minus
Query: 465 aactgaaaaatgtaatt 481
|||| ||||||||||||
Sbjct: 70569 aactaaaaaatgtaatt 70553
Score = 26.3 bits (13), Expect(12) = 0.003
Identities = 13/13 (100%)
Strand = Plus / Plus
Query: 405 atcaaaatcatca 417
|||||||||||||
Sbjct: 40908 atcaaaatcatca 40920
Score = 26.3 bits (13), Expect(12) = 0.003
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 398 ttgaagaatcaaa 410
|||||||||||||
Sbjct: 86202 ttgaagaatcaaa 86190
Score = 26.3 bits (13), Expect(12) = 0.003
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 891 aataatgcttcat 903
|||||||||||||
Sbjct: 64448 aataatgcttcat 64436
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 32,273,976
Number of Sequences: 30679270
Number of extensions: 32273976
Number of successful extensions: 2579380
Number of sequences better than 10.0: 531
length of query: 1239
length of database: T,251,742,201
effective HSP length: 23
effective length of query: 1216
effective length of database: S,546,118,991
effective search space: 43224080693056
effective search space used: 43224080693056
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home