Dictyostelium discoideum cDNA Clone SFF648

Sequence SFF648

ACAAAACCAA AGGAATATAC ACCACAATGA TTTCTGGTTT ATTTAAATTA
TCAAATAAAC AAAGTGTTTT ACAAAATGCA ACCAAATTAG TTTTACAACG
TCGTACATTC TTTAATATTG TACCAAATCC AAGTGTTGGA TTAACAGAGG
ATCAAAAACA ATTTCAATCA ATGGCATTAG ATTTTGCACA AGAAAAGATG
AAACCATTTG CAGAGAAATG GGATAAAGAG GAATATTTTC CAAGAGATGT
GATGAGAGAA GCAGCAGAAT TAGGATTTGG TGGTATTTAT GTTAGAGAGG
ATGTAGGTGG ATCAGGATTG AGTAGATTGG ATGCATCGAT AATTATAGAG
GCATTGGCAT CAGCAGATGT CTCAACAACA GCATTCATTA GTATTCATAA
TATGTGTGCA GGTTTAATAG ATATATACGG TACAGAAGAA CAACGTAAAA
AGTTTTTACC ATCATTAGTT AGTATGGAAA AGATTGCAAG CTATTGTCTA
ACTGAGCCTG GTAGCGGCTC GGACGCAGGC TCATTGTCAA CCAAAGCAAC
CAAAGATGGC GATCATTATA TTTTAAATGG AAGCAAGGCA TTCATTAGCG
GGGGTGGCGA CAGCGAGGTC TATTTAGTCA TGGTCAGAAC GGGCGCGGAG
AAGGGACCAA AGGGGATCTC CTGTCTCTTG GTGGAGAAGG ACACCCCAGG
CCTTAGCTTC GGCAAAAAGG AGGAGAAACT AGGCTGGAAC ACCCAACCAA
CTCGTGCATT GATTTTCGAA GATTGTCGTG TACCAGTTGG CAATTTAATT
GGCAAAGAGG GTCAAGGCTT TTCCATTGCT ATGAACGCTT TAAACGGCGG
TCGTATCAAC ATTGGTGCTT GTAGTTTGGG TGGGGCCCAA TCTTGTTTGG
TGGCCGCTAG AGATCATGTT AAAGTTAGAA AACAATTCAA TCAACCATTG
GAACATTTCC AAGCCGTTCA ATTTAAAATG GCAGATATGG CCACTAAATT
ACATGCATCT CGTATTATGA TTAGAAATGC CGCTGCAATG TTGGATGCAA
AAGATCCATC TGCTCATGTT TACATTGCAA TGGCAAAATT ATTTGCTTGT
GATGAATGTT TCAAAGTTAC CGATGATTCA CTTCAATTAT TTGGTGGTTA
TGGTTATCTT AAAGATTATC CAGTTGAAAG ATATTTACGT GATCTTCGTG
TTCATCGTAT TTTGGAAGGT TCTGATGCTG TTATAGATAA TCATTTCAAG
AGAATTAAGT AAAGA

Translated Amino Acid Sequence SFF648

KTKGIYTTMISGLFKLSNKQSVLQNATKLVLQRRTFFNIVPNPSVGLTEDQKQFQSMALD
FAQEKMKPFAEKWDKEEYFPRDVMREAAELGFGGIYVREDVGGSGLSRLDASIIIEALAS
ADVSTTAFISIHNMCAGLIDIYGTEEQRKKFLPSLVSMEKIASYCLTEPGSGSDAGSLST
KATKDGDHYILNGSKAFISGGGDSEVYLVMVRTGAEKGPKGISCLLVEKDTPGLSFGKKE
EKLGWNTQPTRALIFEDCRVPVGNLIGKEGQGFSIAMNALNGGRINIGACSLGGAQSCLV
AARDHVKVRKQFNQPLEHFQAVQFKMADMATKLHASRIMIRNAAAMLDAKDPSAHVYIAM
AKLFACDECFKVTDDSLQLFGGYGYLKDYPVERYLRDLRVHRILEGSDAVIDNHFKRIK*
r

Homology SFF648 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SFF648 (SFF648Q) /CSM/SF/SFF6-B/SFF648Q.Seq.d/                       2508   0.0
SFG829 (SFG829Q) /CSM/SF/SFG8-B/SFG829Q.Seq.d/                       2494   0.0
VFC645 (VFC645Q) /CSM/VF/VFC6-B/VFC645Q.Seq.d/                       2470   0.0
VFG172 (VFG172Q) /CSM/VF/VFG1-C/VFG172Q.Seq.d/                       2381   0.0
CFA163 (CFA163Q) /CSM/CF/CFA1-C/CFA163Q.Seq.d/                       2218   0.0
AFM805 (AFM805Q) /CSM/AF/AFM8-A/AFM805Q.Seq.d/                       1479   0.0
VFI287 (VFI287Q) /CSM/VF/VFI2-D/VFI287Q.Seq.d/                       1453   0.0
VFM512 (VFM512Q) /CSM/VF/VFM5-A/VFM512Q.Seq.d/                       1251   0.0
VFB804 (VFB804Q) /CSM/VF/VFB8-A/VFB804Q.Seq.d/                       1247   0.0
SFB688 (SFB688Q) /CSM/SF/SFB6-D/SFB688Q.Seq.d/                       1243   0.0

Homology SFF648 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


U17110|U17110.1 Clostridium acetobutylicum crotonase (crt), ...    48   8e-06  5
AE007768|AE007768.1 Clostridium acetobutylicum ATCC824 secti...    48   3e-04  5
BX866308|BX866308.1 Rainbow trout multi-tissues - normalized...    56   0.001  1
AP004603|AP004603.1 Oceanobacillus iheyensis HTE831 genomic ...    50   0.077  1
AL331969|AL331969.1 Tetraodon nigroviridis genome survey seq...    50   0.077  1
AE015944|AE015944.1 Clostridium tetani E88, section 9 of 10 ...    36   0.16   2
BX005351|BX005351.7 Zebrafish DNA sequence from clone CH211-...    34   0.20   7
AC117441|AC117441.3 Homo sapiens 3 BAC RP11-803L18 (Roswell ...    48   0.31   1
CA347210|CA347210.1 678289 NCCCWA 1RT Oncorhynchus mykiss cD...    48   0.31   1
AL627232|AL627232.6 Human DNA sequence from clone RP11-363P1...    38   0.31   5

Homology SFF648 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54IM8) RecName: Full=Isobutyryl-CoA dehydrogenase, mitochondri...   800   0.0
BC044203_1(BC044203|pid:none) Danio rerio acyl-Coenzyme A dehydr...   497   e-139
(Q9UKU7) RecName: Full=Isobutyryl-CoA dehydrogenase, mitochondri...   493   e-138
AK019502_1(AK019502|pid:none) Mus musculus 0 day neonate skin cD...   493   e-138
AK029897_1(AK029897|pid:none) Mus musculus adult male testis cDN...   493   e-138
BC001964_1(BC001964|pid:none) Homo sapiens acyl-Coenzyme A dehyd...   493   e-138
AK051091_1(AK051091|pid:none) Mus musculus 9 days embryo whole b...   492   e-137
(Q9D7B6) RecName: Full=Isobutyryl-CoA dehydrogenase, mitochondri...   491   e-137
BC056845_1(BC056845|pid:none) Xenopus laevis hypothetical protei...   488   e-136
AP007255_3586(AP007255|pid:none) Magnetospirillum magneticum AMB...   480   e-134

Homology SFF648 vs Genome