Dictyostelium discoideum cDNA Clone SFF608

Sequence SFF608

ATTTTTTAAT AAATTATAAA ACTTTGTTGT TGTGTTATTC AATCCAATAT
ATTTACATAT TTTTTATATA TATATTTTTT TTTTTTCCCA AATTATNTAT
TTTTNAAAAA ATCATA---- ------CTCC ACCAAAACCA CCAGGTCCAC
CACCACCACC ACCAGCTCCA AAACCACCAG CCGCAGGTGG CGGTACTGGA
AGAAATGCCC TTTTAGGTTC AATTGAAAAT TTCTCAAAGG GTGGACTTAA
AAAGACAGTT ACAGTTGATA AAAGCGCTGG TGTACCAACA AAAACCACAC
CATCTGCAAA TTCAGCTGCC AGCAATGCTG GATCAGAGCC ATCATCAGGC
GGTTCAACAC CAGCACCAGC TCCAAAATCT AGCGGTGGTG GTGGCGGTGG
TGATTTAATG GCCGAAGTTA TGGCCAAGAG AGCCAAAATG AAGGCAGCAG
CATCTCAACC AAAAGAAGAA TCATCAGCAC CAACTCCAGC ACCAACTCCA
GCACCAACTC CAGCACCAAC CCCATCATCA ACATCTTTCA AACCACCACA
ATCATTCAGT AAACCAGCAA CTAAANCAGC TGCTGCAAGC AAACCACCTT
CNCCATCCTT ATCAGCTCCA CTCCCATCAA CTGTAGCCAA TGAAGATTTA
CAATCACTCA AAGAAGAAAT TTTAACTGAA GTTAGAAAGG AAATTCAAAN
AGCTAAAGAT NAAATTTTAG AAGCAATCAG AGCATCTCAN C

Translated Amino Acid Sequence SFF608

FLINYKTLLLCYSIQYIYIFFIYIFFFFPKLXIFXKII---

---PPKPPGPPPPPPAPKPPAAGGGTGRNALLGSIENFSKGGLKKTVTVDKSAGVPTKTT
PSANSAASNAGSEPSSGGSTPAPAPKSSGGGGGGDLMAEVMAKRAKMKAAASQPKEESSA
PTPAPTPAPTPAPTPSSTSFKPPQSFSKPATKXAAASKPPSPSLSAPLPSTVANEDLQSL
KEEILTEVRKEIQXAKDXILEAIRASX

Homology SFF608 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SFF608 (SFF608Q) /CSM/SF/SFF6-A/SFF608Q.Seq.d/                       1086   0.0
SLC230 (SLC230Q) /CSM/SL/SLC2-B/SLC230Q.Seq.d/                       1078   0.0
FC-209 (FC-209Q) /CSM/CG/CG-FC/FC-209Q.Seq.d/                        1078   0.0
AFG225 (AFG225Q) /CSM/AF/AFG2-B/AFG225Q.Seq.d/                       1078   0.0
AFK259 (AFK259Q) /CSM/AF/AFK2-C/AFK259Q.Seq.d/                       1076   0.0
SLH329 (SLH329Q) /CSM/SL/SLH3-B/SLH329Q.Seq.d/                       1070   0.0
AFO838 (AFO838Q) /CSM/AF/AFO8-B/AFO838Q.Seq.d/                       1070   0.0
AFM687 (AFM687Q) /CSM/AF/AFM6-D/AFM687Q.Seq.d/                       1047   0.0
FC-BD13 (FC-BD13Q) /CSM/FC/FC-BD/FC-BD13Q.Seq.d/                     1043   0.0
FC-AZ18 (FC-AZ18Q) /CSM/FC/FC-AZ/FC-AZ18Q.Seq.d/                     1019   0.0

Homology SFF608 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AL205967|AL205967.1 Tetraodon nigroviridis genome survey seq...    56   3e-08  3
CC862537|CC862537.1 NDL.109E5.T7 Notre Dame Liverpool Aedes ...    62   2e-07  2
CC850783|CC850783.1 NDL.109H18.T7 Notre Dame Liverpool Aedes...    62   2e-07  2
CC871017|CC871017.1 NDL.109E4.T7 Notre Dame Liverpool Aedes ...    62   1e-05  2
AC114197|AC114197.4 Rattus norvegicus clone CH230-213I14, **...    54   2e-05  5
AL354758|AL354758.14 Human DNA sequence from clone RP11-29P1...    40   1e-04  5
AC005139|AC005139.3 Plasmodium falciparum chromosome 12, ***...    48   2e-04  10
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma...    34   3e-04  13
AC129052|AC129052.4 Rattus norvegicus clone CH230-123E11, WO...    48   3e-04  2
AE014838|AE014838.1 Plasmodium falciparum 3D7 chromosome 11 ...    40   3e-04  8

Homology SFF608 vs Protein

Sequences producing significant alignments:                      (bits) Value


FN357388_31(FN357388|pid:none) Schistosoma mansoni genome sequen...    38   0.60
FN317007_1(FN317007|pid:none) Schistosoma japonicum isolate Anhu...    37   1.0
X98534_1(X98534|pid:none) H.sapiens VASP gene, exons 4 to 13 and...    35   3.0
BX649457_1(BX649457|pid:none) Zebrafish DNA sequence from clone ...    35   3.0
(P50552) RecName: Full=Vasodilator-stimulated phosphoprotein;   ...    35   3.0
BC026019_1(BC026019|pid:none) Homo sapiens vasodilator-stimulate...    35   3.0
(P50551) RecName: Full=Vasodilator-stimulated phosphoprotein;   ...    35   3.0
A84509_1(A84509|pid:none) Sequence 124 from Patent WO9845704.  &...    35   3.0
AY007501_1(AY007501|pid:none) Hirudo medicinalis enabled-like pr...    35   3.0
(Q2TA49) RecName: Full=Vasodilator-stimulated phosphoprotein;   ...    35   3.0

Homology SFF608 vs Genome