Homology SFF557 vs DNA
Query= SFF557 (SFF557Q) /CSM/SF/SFF5-C/SFF557Q.Seq.d/
(753 letters)
Database: ddbjhum1.seq; ddbjhum10.seq; ddbjhum11.seq; ddbjhum12.seq;
ddbjhum13.seq; ddbjhum14.seq; ddbjhum15.seq; ddbjhum16.seq;
ddbjhum17.seq; ddbjhum18.seq; ddbjhum19.seq; ddbjhum2.seq;
ddbjhum20.seq; ddbjhum21.seq; ddbjhum3.seq; ddbjhum4.seq;
ddbjhum5.seq; ddbjhum6.seq; ddbjhum7.seq; ddbjhum8.seq; ddbjhum9.seq;
/db/DDBJNEW.DATA/b/new_ddbjhum.seq; ddbjpri.seq;
/db/DDBJNEW.DATA/b/new_ddbjpri.seq; ddbjrod1.seq; ddbjrod2.seq;
ddbjrod3.seq; ddbjrod4.seq; ddbjrod5.seq; ddbjrod6.seq; ddbjrod7.seq;
ddbjrod8.seq; /db/DDBJNEW.DATA/b/new_ddbjrod.seq; ddbjmam.seq;
/db/DDBJNEW.DATA/b/new_ddbjmam.seq; ddbjvrt1.seq; ddbjvrt2.seq;
ddbjvrt3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrt.seq; ddbjinv1.seq;
ddbjinv2.seq; ddbjinv3.seq; ddbjinv4.seq; ddbjinv5.seq;
/db/DDBJNEW.DATA/b/new_ddbjinv.seq; ddbjpln1.seq; ddbjpln2.seq;
ddbjpln3.seq; ddbjpln4.seq; ddbjpln5.seq; ddbjpln6.seq; ddbjpln7.seq;
ddbjpln8.seq; /db/DDBJNEW.DATA/b/new_ddbjpln.seq; ddbjbct1.seq;
ddbjbct2.seq; ddbjbct3.seq; ddbjbct4.seq; ddbjbct5.seq; ddbjbct6.seq;
/db/DDBJNEW.DATA/b/new_ddbjbct.seq; ddbjvrl1.seq; ddbjvrl2.seq;
ddbjvrl3.seq; /db/DDBJNEW.DATA/b/new_ddbjvrl.seq; ddbjphg.seq;
/db/DDBJNEW.DATA/b/new_ddbjphg.seq; ddbjuna.seq;
/db/DDBJNEW.DATA/b/new_ddbjuna.seq; ddbjgss1.seq; ddbjgss10.seq;
ddbjgss11.seq; ddbjgss12.seq; ddbjgss13.seq; ddbjgss14.seq;
ddbjgss15.seq; ddbjgss16.seq; ddbjgss17.seq; ddbjgss18.seq;
ddbjgss19.seq; ddbjgss2.seq; ddbjgss20.seq; ddbjgss21.seq;
ddbjgss22.seq; ddbjgss23.seq; ddbjgss24.seq; ddbjgss25.seq;
ddbjgss26.seq; ddbjgss27.seq; ddbjgss28.seq; ddbjgss29.seq;
ddbjgss3.seq; ddbjgss30.seq; ddbjgss31.seq; ddbjgss32.seq;
ddbjgss33.seq; ddbjgss34.seq; ddbjgss35.seq; ddbjgss36.seq;
ddbjgss37.seq; ddbjgss38.seq; ddbjgss39.seq; ddbjgss4.seq;
ddbjgss40.seq; ddbjgss41.seq; ddbjgss42.seq; ddbjgss43.seq;
ddbjgss44.seq; ddbjgss45.seq; ddbjgss46.seq; ddbjgss47.seq;
ddbjgss48.seq; ddbjgss49.seq; ddbjgss5.seq; ddbjgss50.seq;
ddbjgss51.seq; ddbjgss52.seq; ddbjgss53.seq; ddbjgss54.seq;
ddbjgss55.seq; ddbjgss56.seq; ddbjgss57.seq; ddbjgss58.seq;
ddbjgss59.seq; ddbjgss6.seq; ddbjgss60.seq; ddbjgss61.seq;
ddbjgss62.seq; ddbjgss63.seq; ddbjgss64.seq; ddbjgss7.seq;
ddbjgss8.seq; ddbjgss9.seq; /db/DDBJNEW.DATA/b/new_ddbjgss1.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss2.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss3.seq;
/db/DDBJNEW.DATA/b/new_ddbjgss4.seq; ddbjhtg1.seq; ddbjhtg10.seq;
ddbjhtg11.seq; ddbjhtg12.seq; ddbjhtg13.seq; ddbjhtg14.seq;
ddbjhtg15.seq; ddbjhtg16.seq; ddbjhtg17.seq; ddbjhtg18.seq;
ddbjhtg19.seq; ddbjhtg2.seq; ddbjhtg20.seq; ddbjhtg21.seq;
ddbjhtg22.seq; ddbjhtg23.seq; ddbjhtg24.seq; ddbjhtg25.seq;
ddbjhtg26.seq; ddbjhtg27.seq; ddbjhtg28.seq; ddbjhtg29.seq;
ddbjhtg3.seq; ddbjhtg30.seq; ddbjhtg31.seq; ddbjhtg32.seq;
ddbjhtg33.seq; ddbjhtg34.seq; ddbjhtg35.seq; ddbjhtg36.seq;
ddbjhtg37.seq; ddbjhtg38.seq; ddbjhtg39.seq; ddbjhtg4.seq;
ddbjhtg40.seq; ddbjhtg41.seq; ddbjhtg42.seq; ddbjhtg43.seq;
ddbjhtg44.seq; ddbjhtg45.seq; ddbjhtg46.seq; ddbjhtg47.seq;
ddbjhtg48.seq; ddbjhtg49.seq; ddbjhtg5.seq; ddbjhtg50.seq;
ddbjhtg51.seq; ddbjhtg52.seq; ddbjhtg6.seq; ddbjhtg7.seq;
ddbjhtg8.seq; ddbjhtg9.seq; /db/DDBJNEW.DATA/b/new_ddbjhtg1.seq;
ddbjpat1.seq; ddbjpat2.seq; ddbjpat3.seq; ddbjpat4.seq; ddbjpat5.seq;
ddbjpat6.seq; ddbjpat7.seq; ddbjpat8.seq;
/db/DDBJNEW.DATA/b/new_ddbjpat.seq; ddbjsts1.seq; ddbjsts2.seq;
ddbjsts3.seq; /db/DDBJNEW.DATA/b/new_ddbjsts.seq; ddbjsyn.seq;
/db/DDBJNEW.DATA/b/new_ddbjsyn.seq; est_atha1.seq;
/db/DDBJNEW.DATA/b/new_est_atha1.seq; est_btra1.seq;
/db/DDBJNEW.DATA/b/new_est_btra1.seq; est_cele1.seq; est_crei1.seq;
/db/DDBJNEW.DATA/b/new_est_crei1.seq; est_cint1.seq; est_drer1.seq;
/db/DDBJNEW.DATA/b/new_est_drer1.seq; est_dmel1.seq;
/db/DDBJNEW.DATA/b/new_est_dmel1.seq; est_ggal1.seq;
/db/DDBJNEW.DATA/b/new_est_ggal1.seq; est_gmax1.seq;
/db/DDBJNEW.DATA/b/new_est_gmax1.seq; est_hum1.seq; est_hum2.seq;
est_hum3.seq; est_hum4.seq; /db/DDBJNEW.DATA/b/new_est_hum1.seq;
est_hvul1.seq; /db/DDBJNEW.DATA/b/new_est_hvul1.seq; est_lesc1.seq;
/db/DDBJNEW.DATA/b/new_est_lesc1.seq; est_mous1.seq; est_mous2.seq;
est_mous3.seq; /db/DDBJNEW.DATA/b/new_est_mous1.seq; est_mtru1.seq;
/db/DDBJNEW.DATA/b/new_est_mtru1.seq; est_osat1.seq;
/db/DDBJNEW.DATA/b/new_est_osat1.seq; est_rnor1.seq;
/db/DDBJNEW.DATA/b/new_est_rnor1.seq; est_stro1.seq;
/db/DDBJNEW.DATA/b/new_est_stro1.seq; est_taes1.seq;
/db/DDBJNEW.DATA/b/new_est_taes1.seq; est_xlae1.seq;
/db/DDBJNEW.DATA/b/new_est_xlae1.seq; est_zmay1.seq;
/db/DDBJNEW.DATA/b/new_est_zmay1.seq; est_rest1.seq; est_rest2.seq;
/db/DDBJNEW.DATA/b/new_est_rest1.seq
30,679,270 sequences; T,251,742,201 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value N
Y00145|Y00145.1 Dictyostelium discoideum UDP glucose pyropho... 876 0.0 3
AF150929|AF150929.1 Dictyostelium discoideum UDP-glucose pyr... 50 8e-05 3
AL445565|AL445565.1 Mycoplasma pulmonis (strain UAB CTIP) co... 36 1e-04 17
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma... 34 4e-04 19
BX572093|BX572093.1 Prochlorococcus marinus MED4 complete ge... 30 5e-04 15
AC117076|AC117076.2 Dictyostelium discoideum chromosome 2 ma... 34 0.001 10
AR271569|AR271569.1 Sequence 1 from patent US 6503729. 34 0.002 29
BI322718|BI322718.1 kx15d03.y3 Parastrongyloides trichosuri ... 36 0.003 2
AC104700|AC104700.4 Homo sapiens BAC clone RP11-712I20 from ... 32 0.003 10
AP004170|AP004170.1 Mycoplasma penetrans genomic DNA, comple... 32 0.003 16
AC117072|AC117072.2 Dictyostelium discoideum chromosome 2 ma... 30 0.016 12
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma... 30 0.016 17
AC115612|AC115612.2 Dictyostelium discoideum chromosome 2 ma... 32 0.030 10
BI743473|BI743473.1 kx44f12.y1 Parastrongyloides trichosuri ... 36 0.036 2
AC123897|AC123897.2 Oryza sativa (japonica cultivar-group) c... 40 0.041 8
AF250284|AF250284.1 Amsacta moorei entomopoxvirus, complete ... 32 0.044 13
AX348530|AX348530.1 Sequence 38 from Patent WO0202809. 50 0.045 1
AC115598|AC115598.2 Dictyostelium discoideum chromosome 2 ma... 32 0.049 11
AE016748|AE016748.1 Staphylococcus epidermidis ATCC 12228, s... 32 0.054 13
AC147523|AC147523.1 Otolemur garnettii clone CH256-193L8, WO... 40 0.055 7
AC128736|AC128736.4 Mus musculus chromosome 15 clone RP24-33... 36 0.058 6
AC101676|AC101676.3 Mus musculus clone RP23-136H21, WORKING ... 36 0.060 7
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 ma... 30 0.070 16
BX005446|BX005446.8 Mouse DNA sequence from clone RP23-20G23... 34 0.074 8
AP004173|AP004173.1 Mycoplasma penetrans genomic DNA, comple... 36 0.086 14
AE014821|AE014821.1 Plasmodium falciparum 3D7 chromosome 14 ... 32 0.095 10
AC136383|AC136383.1 Rattus norvegicus clone CH230-53O20, ***... 34 0.096 6
AX344558|AX344558.1 Sequence 9 from Patent WO0200932. 34 0.11 10
AF409138|AF409138.1 Lumpy skin disease virus isolate Neethli... 34 0.12 9
BI742772|BI742772.1 kx34h07.y1 Parastrongyloides trichosuri ... 36 0.13 2
AX251102|AX251102.1 Sequence 70 from Patent WO0168912. 36 0.15 3
AX251260|AX251260.1 Sequence 228 from Patent WO0168912. 30 0.15 5
AC068668|AC068668.10 Homo sapiens chromosome 8, clone RP11-5... 48 0.15 4
AC025856|AC025856.13 Homo sapiens chromosome 8, clone RP11-4... 48 0.18 1
AC021393|AC021393.10 Homo sapiens chromosome 8, clone RP11-2... 48 0.18 1
AC069520|AC069520.9 Homo sapiens chromosome 3 clone RP11-269... 48 0.18 1
AL139078|AL139078.2 Campylobacter jejuni subsp. jejuni NCTC ... 32 0.21 12
U67574|U67574.1 Methanococcus jannaschii section 116 of 150 ... 34 0.24 4
AL445564|AL445564.1 Mycoplasma pulmonis (strain UAB CTIP) co... 32 0.24 15
AP003363|AP003363.2 Staphylococcus aureus subsp. aureus Mu50... 38 0.26 10
AP003193|AP003193.2 Clostridium perfringens str. 13 DNA, com... 30 0.26 14
AP003133|AP003133.2 Staphylococcus aureus subsp. aureus N315... 34 0.29 11
BX284634|BX284634.8 Mouse DNA sequence from clone RP23-92B18... 36 0.30 9
AC020749|AC020749.2 Homo sapiens chromosome 3p clone RP11-10... 34 0.31 7
AE002111|AE002111.1 Ureaplasma urealyticum section 12 of 59 ... 38 0.34 3
AL356473|AL356473.11 Human DNA sequence from clone RP11-560O... 30 0.35 11
AC116920|AC116920.2 Dictyostelium discoideum chromosome 2 ma... 30 0.36 12
AP004171|AP004171.1 Mycoplasma penetrans genomic DNA, comple... 32 0.39 13
AY077834|AY077834.1 Sheeppox virus strain NISKHI, complete g... 34 0.44 8
AY077832|AY077832.1 Sheeppox virus strain TU-V02127, complet... 34 0.45 8
AY077833|AY077833.1 Sheeppox virus strain A, complete genome. 34 0.45 8
AC006765|AC006765.1 Caenorhabditis elegans clone Y43H11, ***... 38 0.46 6
AC117749|AC117749.3 Mus musculus clone RP24-319I19, WORKING ... 36 0.46 4
AE014017|AE014017.1 Buchnera aphidicola str. Bp (Baizongia p... 32 0.46 13
AC034122|AC034122.12 Mus musculus chromosome 1, clone RP23-1... 36 0.48 6
BX572092|BX572092.1 Prochlorococcus marinus MED4 complete ge... 32 0.50 13
AC146052|AC146052.3 Pan troglodytes BAC clone RP43-75P3 from... 40 0.52 7
AC100374|AC100374.3 Mus musculus clone RP23-130B20, WORKING ... 34 0.55 12
AC044896|AC044896.3 Homo sapiens chromosome 2 clone RP11-598... 36 0.57 8
AL139076|AL139076.2 Campylobacter jejuni subsp. jejuni NCTC ... 34 0.62 13
AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 ma... 34 0.68 11
AC135414|AC135414.25 Medicago truncatula clone mth2-8n20, WO... 38 0.69 6
AC133137|AC133137.2 Felis catus clone RP86-506G15, WORKING D... 46 0.70 1
BF249948|BF249948.1 pa88g07.y1 Hawdon Ancylostoma caninum L3... 46 0.70 1
AC123362|AC123362.3 Rattus norvegicus clone CH230-155F17, **... 46 0.70 1
AC133138|AC133138.2 Felis catus clone RP86-85C19, WORKING DR... 46 0.70 1
BQ666262|BQ666262.1 pb38g03.y1 Anc caninum L3 serum stim pAM... 46 0.70 1
AC092561|AC092561.1 Ciona savignyi clone -1E18, *** SEQUENCI... 32 0.81 6
AP003362|AP003362.2 Staphylococcus aureus subsp. aureus Mu50... 30 0.83 14
AC005139|AC005139.3 Plasmodium falciparum chromosome 12, ***... 34 0.85 10
AB012245|AB012245.1 Arabidopsis thaliana genomic DNA, chromo... 38 0.88 4
AC005308|AC005308.8 Plasmodium falciparum chromosome 12 clon... 32 0.91 9
AF325528|AF325528.1 Lumpy skin disease virus isolate Neethli... 34 0.97 9
AF409137|AF409137.1 Lumpy skin disease virus isolate Neethli... 34 0.97 9
AC127265|AC127265.4 Mus musculus BAC clone RP24-341O20 from ... 38 1.0 7
AR300198|AR300198.1 Sequence 1 from patent US 6537773. 34 1.1 16
AC122496|AC122496.2 Mus musculus chromosome 5 clone RP24-400... 38 1.1 7
AC145157|AC145157.8 Medicago truncatula clone mth2-13a15, WO... 32 1.1 8
AF165818|AF165818.4 Guillardia theta nucleomorph chromosome ... 32 1.2 10
CC768708|CC768708.1 CH240_68A20.TV CHORI-240 Bos taurus geno... 42 1.2 2
AP003194|AP003194.2 Clostridium perfringens str. 13 DNA, com... 34 1.2 11
AX196296|AX196296.1 Sequence 3 from Patent WO0151627. 32 1.3 12
AX196295|AX196295.1 Sequence 2 from Patent WO0151627. 32 1.3 12
AC103525|AC103525.5 Rattus norvegicus clone CH230-42C5, WORK... 38 1.3 8
AP004828|AP004828.1 Staphylococcus aureus subsp. aureus MW2 ... 32 1.3 9
AB063521|AB063521.2 Wigglesworthia brevipalpis DNA, complete... 36 1.4 15
CE758891|CE758891.1 tigr-gss-dog-17000369694869 Dog Library ... 34 1.4 2
BS000220|BS000220.1 Pan troglodytes chromosome 22 clone:PTB-... 32 1.5 7
AP003466|AP003466.2 Homo sapiens genomic DNA, chromosome 8q2... 38 1.5 8
AC015472|AC015472.3 Homo sapiens clone RP11-3H9, WORKING DRA... 34 1.5 6
AC141758|AC141758.1 Apis mellifera clone CH224-60D16, WORKIN... 38 1.5 8
AC127312|AC127312.4 Mus musculus BAC clone RP23-306F21 from ... 36 1.6 7
AP004526|AP004526.1 Lotus corniculatus var. japonicus genomi... 34 1.6 7
AE003441|AE003441.2 Drosophila melanogaster chromosome X sec... 42 1.6 6
AC080183|AC080183.7 Homo sapiens chromosome , clone RP11-1O2... 32 1.6 9
AL929549|AL929549.9 Zebrafish DNA sequence *** SEQUENCING IN... 34 1.6 6
AC112259|AC112259.2 Mus musculus chromosome UNK clone RP23-1... 32 1.6 11
AL358337|AL358337.1 Human chromosome 14 DNA sequence *** IN ... 32 1.7 10
AC147095|AC147095.1 Pan troglodytes chromosome 7 clone RP43-... 34 1.7 7
AE014841|AE014841.1 Plasmodium falciparum 3D7 chromosome 11 ... 30 1.7 13
>Y00145|Y00145.1 Dictyostelium discoideum UDP glucose
pyrophosphorylase gene (UDPGP; EC 2.7.7.9).
Length = 2318
Score = 876 bits (442), Expect(3) = 0.0
Identities = 442/442 (100%)
Strand = Plus / Plus
Query: 283 cttgaaaatcataaagcaatggtacaattagaaacaccagcaggtatgggtattcaaaat 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1841 cttgaaaatcataaagcaatggtacaattagaaacaccagcaggtatgggtattcaaaat 1900
Query: 343 tttaagaattcagttgcaatttttgtaccacgtgatagatatcgtccaattaaatcaaca 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1901 tttaagaattcagttgcaatttttgtaccacgtgatagatatcgtccaattaaatcaaca 1960
Query: 403 agtcaattattggttgcacaatcaaatattttccaatttgatcatggtcaagttaaatta 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1961 agtcaattattggttgcacaatcaaatattttccaatttgatcatggtcaagttaaatta 2020
Query: 463 aattcaaagagagaaggtcaagatgtaccacttgttaaattgggtgaagaattttcaaca 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2021 aattcaaagagagaaggtcaagatgtaccacttgttaaattgggtgaagaattttcaaca 2080
Query: 523 gtttcagattatgaaaagagatttaaatcaattccagatttattggaattggatcatctt 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2081 gtttcagattatgaaaagagatttaaatcaattccagatttattggaattggatcatctt 2140
Query: 583 actgtttctggtgatgtttactttggttcaagaattactcttaaaggtacagtcattatt 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2141 actgtttctggtgatgtttactttggttcaagaattactcttaaaggtacagtcattatt 2200
Query: 643 gtagctaatcatggtgaacgtgttgatattccagatggtgtggttttagaaaataaagta 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2201 gtagctaatcatggtgaacgtgttgatattccagatggtgtggttttagaaaataaagta 2260
Query: 703 ctttctggcactcttagaattt 724
||||||||||||||||||||||
Sbjct: 2261 ctttctggcactcttagaattt 2282
Score = 519 bits (262), Expect(3) = 0.0
Identities = 265/266 (99%)
Strand = Plus / Plus
Query: 17 aggtattaaatcatattcatttgcaaaagattgaatttggtttagaagttacaaatcgta 76
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1463 aggtattaaatcatattcatttgcaaaagattgaatttggtttagaagtcacaaatcgta 1522
Query: 77 ttaatactgattcaactggtggtattttaatgtcatataaagataaacttcatcttttgg 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1523 ttaatactgattcaactggtggtattttaatgtcatataaagataaacttcatcttttgg 1582
Query: 137 aattatctcaagttaaaccagagaaattaaagatctttaaagattttaaactttggaata 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1583 aattatctcaagttaaaccagagaaattaaagatctttaaagattttaaactttggaata 1642
Query: 197 caaataatatttgggttaatttgaaatcagtttcaaatttaattaaagaagataaattag 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1643 caaataatatttgggttaatttgaaatcagtttcaaatttaattaaagaagataaattag 1702
Query: 257 atttagattggattgttaattatcca 282
||||||||||||||||||||||||||
Sbjct: 1703 atttagattggattgttaattatcca 1728
Score = 63.9 bits (32), Expect(3) = 0.0
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 722 tttggatcattaaattctactcaaaaaattaa 753
||||||||||||||||||||||||||||||||
Sbjct: 2281 tttggatcattaaattctactcaaaaaattaa 2312
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Hits to DB: 23,369,470
Number of Sequences: 30679270
Number of extensions: 23369470
Number of successful extensions: 1938675
Number of sequences better than 10.0: 516
length of query: 753
length of database: T,251,742,201
effective HSP length: 22
effective length of query: 731
effective length of database: S,576,798,261
effective search space: 26006639528791
effective search space used: 26006639528791
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
[blastall] WARNING: [000.000] Reached max 400 HSPs in BlastSaveCurrentHsp, continuing with this limit
ANTI-DNA BLAST search was processed by blast@nig.ac.jp, National Institute of Genetics, Japan.
Dictyostelium discoideum cDNA Project Home