Dictyostelium discoideum cDNA Clone SFF427

Sequence SFF427

---------- CCAATAGCAT GCAGTCATGT TGTGCTCCAT CAAGATTCTT
TGTTCAAGAG AATATCTATG AAGCATTTTT ACAAATTTTC ACAGAGAATA
TTAAATTATT AAAAGTTGGT GATCCAAATG TAAATGGTAC AAATTTAGGC
CCATTAGTTA GTAAACAACA ACATGATCGT GTATTAGGTT ACATCCAAAA
AGGTAAAGAA GAAGGTGCAA CTTGTCATTT AGGTGGTGGT AATTATCATC
ATGCCGATGG TAAAGGTTAT TTCGTTCAAC CAACTATTTT CACCAATGTC
ACTGATGATA TGACAATTTG TAAAGAAGAA ATCTTTGGTC CTGTTGTTGT
AATTTTACCA TTCAAAACTG TTGATGAAGT AATTAAAAGA GCAAATAACA
CAACCTATGG TTTAGCAGCT GGTGTTTGGA CTAAAGATAT CAGTTTAGCA
TTAAATGTTT CAAATAAATT AAAAAGTGGT TCAGTTTGGA TTAATGAATA
TTATTCAATC ATGCCATCAA TACCATTTGG TGGTTATAAA CAATCTGGTA
TTGGTCGTGA CCTATCTGAA TATGCAATTC AAAGTTATTT ATCTGTTAAA
GCTGTTACAA TTGCTCATAA AACTTTACAT GCTCAACAAC AAAACAACAA
CAAACAATAA ATAAAANCTT TTTA

Translated Amino Acid Sequence SFF427

---NSMQSCCAPSRFFVQENIYEAFLQIFTENIKLLKVGDPNVNGTNLGPLVSKQQHDRV
LGYIQKGKEEGATCHLGGGNYHHADGKGYFVQPTIFTNVTDDMTICKEEIFGPVVVILPF
KTVDEVIKRANNTTYGLAAGVWTKDISLALNVSNKLKSGSVWINEYYSIMPSIPFGGYKQ
SGIGRDLSEYAIQSYLSVKAVTIAHKTLHAQQQNNNKQ*ikxf

Homology SFF427 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSD456 (VSD456Q) /CSM/VS/VSD4-C/VSD456Q.Seq.d/                       1235   0.0
VFM249 (VFM249Q) /CSM/VF/VFM2-C/VFM249Q.Seq.d/                       1235   0.0
VFD241 (VFD241Q) /CSM/VF/VFD2-B/VFD241Q.Seq.d/                       1235   0.0
SFF427 (SFF427Q) /CSM/SF/SFF4-B/SFF427Q.Seq.d/                       1235   0.0
VFM553 (VFM553Q) /CSM/VF/VFM5-C/VFM553Q.Seq.d/                       1227   0.0
VFH550 (VFH550Q) /CSM/VF/VFH5-C/VFH550Q.Seq.d/                       1215   0.0
VFA669 (VFA669Q) /CSM/VF/VFA6-C/VFA669Q.Seq.d/                       1191   0.0
CFJ180 (CFJ180Q) /CSM/CF/CFJ1-D/CFJ180Q.Seq.d/                       1140   0.0
VSC495 (VSC495Q) /CSM/VS/VSC4-D/VSC495Q.Seq.d/                       1031   0.0
SSG684 (SSG684Q) /CSM/SS/SSG6-D/SSG684Q.Seq.d/                        777   0.0

Homology SFF427 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


U70317|U70317.1 Dictyostelium discoideum HydA (hydA) gene, p...  1215   0.0    1
BI323317|BI323317.1 kt69f06.y1 Strongyloides ratti L2 pAMP1 ...    40   5e-06  3
AE017033|AE017033.1 Bacillus anthracis str. Ames section 10 ...    46   8e-06  7
AE017007|AE017007.1 Bacillus cereus ATCC 14579 section 10 of...    50   2e-05  8
BP189858|BP189858.1 Dugesia japonica cDNA, clone: 02753_HH, ...    48   2e-05  2
AC116988|AC116988.2 Dictyostelium discoideum chromosome 2 ma...    34   2e-04  14
AC102779|AC102779.6 Mus musculus chromosome 19, clone RP23-4...    48   6e-04  3
AF333962|AF333962.1 Staphylococcus aureus transcription term...    56   6e-04  1
AX619230|AX619230.1 Sequence 2193 from Patent WO02094868.          56   6e-04  1
AR354367|AR354367.1 Sequence 485 from patent US 6593114.           56   6e-04  1

Homology SFF427 vs Protein

Sequences producing significant alignments:                      (bits) Value


U70317_1(U70317|pid:none) Dictyostelium discoideum HydA (hydA) g...   425   e-117
CP001907_2806(CP001907|pid:none) Bacillus thuringiensis serovar ...   220   4e-56
CP000903_2567(CP000903|pid:none) Bacillus weihenstephanensis KBA...   217   5e-55
AE017194_2836(AE017194|pid:none) Bacillus cereus ATCC 10987, com...   216   1e-54
DQ767721_1(DQ767721|pid:none) Beauveria bassiana putative aldehy...   214   2e-54
CP001746_2611(CP001746|pid:none) Bacillus cereus biovar anthraci...   214   3e-54
CP001283_2747(CP001283|pid:none) Bacillus cereus AH820, complete...   214   4e-54
(P86886) RecName: Full=Retinal dehydrogenase 1;          Short=R...   213   5e-54
CP001407_2739(CP001407|pid:none) Bacillus cereus 03BB102, comple...   212   1e-53
CP000485_2405(CP000485|pid:none) Bacillus thuringiensis str. Al ...   212   1e-53

Homology SFF427 vs Genome