Dictyostelium discoideum cDNA Clone SFF131

Sequence SFF131

AATGAAATTT TTATTAAAAA TAATTTATTG ATCTTTTTTT TTGTGAATTC
CTGTAACTCA CATCACTATG TTGGTATTAT CGATGACAAT TCTATAACTC
CAAACATGCA ATGGTTTAAC GATATTATGT TCATTAGAAG AAACGCCAAT
GGTGCCTGGC CTAGAGTTAA TTCTTTTAAT TGAAACGGGG TATACTTTGT
TTTCGGGAAT ATGGCTCCTC ATGGATTGAC CTTGCTGTAT ATAGGTAAAG
CATCCCATCA AGATGGGATG GGTTTGTACC ACAGAGGTTA CTCAGATATA
GTTGGTCGCC CAAGGTTTTG GGGGACTCCA AATGCAAGAC CACTAGAAAT
GGCAAATGCC CAAATTTTAA TGTATTATAG AGGTTTTGAT GGTCCAGTTG
CCGGTCATGC TGAGTGGTTC CTTTCAGTAT TTGGGNGCCC AGAAAATAGT
TTCAACGAGG GTGGTTTAAA GGAATCTCAA TTTTGTTATG GTGCAGGTCA
ATGGAATTTT TTCCATGCAA CTGCTCCCGC AGTTAATGTT TGC-------
---AAAGTAG ATTAGCTGCT GCAATTGGAA TTGATCCATA CACTTCACAA
CATGATTTAA AATTAATATT AGCGAAAAAG AAAACCCCAT TCTTTAGTGA
CTACTGTAAA AAGGCAATGG AACATGGTAA ACACCAAGAA CCAATAGCAA
GAGAATTTTA TTTTAATGAA TTGGAGACTT CAATTATCGA AAAGGGTATC
TTTCCATTGC CAGGCGACAA AAGAATTGGA TGTTCTCCTG ATGGGGTAAT
TTACACAACA GTACCTGGTA AAGATGGAGT TTTACAGCGT GAAGGAGTTA
TTGAAATAAA ATGTCCACTA TCTACCACGA ACTTCAGTGG CCTAAAGAAT
GGTAGAAAAC CTGATGCCTT AGCTAATGCT CAGAAAATAC CTCTAGATTA
CATTCCACAA ATATTTGCAA ACATGGCATG TACTGGGGCA CAATGGTGTG
ATTATATATG TTGGGTTCCA GGTGAGGTAT ACTTTTGTAG AAGGGTATTC
TTTGATACAA ATGTATTCGT TAGCAAAATT ATTTATAGAT ACACCTTTAA
ATGAAATACC TTAAAGAATA AAAAACATTA ATAATAAATA CATTACTCTT
ACAGAAACTN AAGTTTTAAT CCACACCTAA ANATTCATGT ACGAACT

Translated Amino Acid Sequence SFF131

neifiknnllifffvnscnshhyvgiiddnsitpnmqwfndimfirrnangawprvnsfn
*NGVYFVFGNMAPHGLTLLYIGKASHQDGMGLYHRGYSDIVGRPRFWGTPNARPLEMANA
QILMYYRGFDGPVAGHAEWFLSVFGXPENSFNEGGLKESQFCYGAGQWNFFHATAPAVNV
C---

---SRLAAAIGIDPYTSQHDLKLILAKKKTPFFSDYCKKAMEHGKHQEPIAREFYFNELE
TSIIEKGIFPLPGDKRIGCSPDGVIYTTVPGKDGVLQREGVIEIKCPLSTTNFSGLKNGR
KPDALANAQKIPLDYIPQIFANMACTGAQWCDYICWVPGEVYFCRRVFFDTNVFVSKIIY
RYTFK*ntlknkkh***ihysyrnxsfnphlxihvrt

Homology SFF131 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SFF131 (SFF131Q) /CSM/SF/SFF1-B/SFF131Q.Seq.d/                       2242   0.0
AFN861 (AFN861Q) /CSM/AF/AFN8-C/AFN861Q.Seq.d/                       1219   0.0
SFJ512 (SFJ512Q) /CSM/SF/SFJ5-A/SFJ512Q.Seq.d/                       1205   0.0
CFJ231 (CFJ231Q) /CSM/CF/CFJ2-B/CFJ231Q.Seq.d/                       1203   0.0
CHD730 (CHD730Q) /CSM/CH/CHD7-B/CHD730Q.Seq.d/                       1191   0.0
AFC162 (AFC162Q) /CSM/AF/AFC1-C/AFC162Q.Seq.d/                       1164   0.0
CFD588 (CFD588Q) /CSM/CF/CFD5-D/CFD588Q.Seq.d/                        973   0.0
CHC128 (CHC128Q) /CSM/CH/CHC1-B/CHC128Q.Seq.d/                        967   0.0
SHA540 (SHA540Q) /CSM/SH/SHA5-B/SHA540Q.Seq.d/                        531   e-150
CHL386 (CHL386Q) /CSM/CH/CHL3-D/CHL386Q.Seq.d/                        424   e-117

Homology SFF131 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC116551|AC116551.2 Dictyostelium discoideum chromosome 2 ma...   852   0.0    5
AP001118|AP001118.1 Buchnera aphidicola str. APS (Acyrthosip...    34   2e-05  16
AF250284|AF250284.1 Amsacta moorei entomopoxvirus, complete ...    36   4e-04  16
AF410153|AF410153.1 Swinepox virus isolate 17077-99, complet...    36   5e-04  10
AX344566|AX344566.1 Sequence 17 from Patent WO0200932.             32   5e-04  16
AC116984|AC116984.2 Dictyostelium discoideum chromosome 2 ma...    40   8e-04  19
AE014821|AE014821.1 Plasmodium falciparum 3D7 chromosome 14 ...    38   9e-04  13
BX470073|BX470073.8 Zebrafish DNA sequence from clone DKEY-2...    38   0.001  8
BD061520|BD061520.1 Genome DNA of symbiotic bacteria of aphid.     34   0.002  21
AX344573|AX344573.1 Sequence 24 from Patent WO0200932.             34   0.002  13

Homology SFF131 vs Protein

Sequences producing significant alignments:                      (bits) Value


CP001154_1490(CP001154|pid:none) Laribacter hongkongensis HLHK9,...    74   2e-11
BX640412_161(BX640412|pid:none) Bordetella pertussis strain Toha...    70   2e-10
BX640443_240(BX640443|pid:none) Bordetella bronchiseptica strain...    70   2e-10
FN545225_18(FN545225|pid:none) Arsenophonus nasoniae whole genom...    68   9e-10
CP001562_872(CP001562|pid:none) Bartonella grahamii as4aup, comp...    68   1e-09
FN645507_4(FN645507|pid:none) Bartonella schoenbuchensis R1 cont...    64   1e-08
FN645509_387(FN645509|pid:none) Bartonella schoenbuchensis R1 co...    64   1e-08
BX897699_671(BX897699|pid:none) Bartonella henselae strain Houst...    64   2e-08
CP001277_1425(CP001277|pid:none) Candidatus Hamiltonella defensa...    62   6e-08
HM004430_126(HM004430|pid:none) Bathycoccus sp. RCC1105 virus Bp...    62   8e-08

Homology SFF131 vs Genome