Dictyostelium discoideum cDNA Clone SFE710

Sequence SFE710

AATTTAATAA TATAACACCA AACTTTGTAT TTTAATAAAC TTTCTAGATT
TCTTTATTTT TAAAAAAAAA TTATTTAAAT AATTAAATAG ATATTAAAAA
TAAAATAAAA TGGATTCAGG ATTAGGTAGT TCATATCCAG AGGAAAGAAG
TGGACCACCA GAAATTAGAC CAGAAGAAAT CAATTTTGAG GAACTCATTG
GTACTGGTTC CTTTGGTAAA GTTTATAAAG GAAGATGTAG ACAAAAGGCA
GTAGCAGTTA AATTATTACA TAAACAAAAT TTCGATGCAG CAACATTAAG
TGCCTTTAGA AAGGAGGTAC ACTTAATGAG TAAAATTTAT CATCCAAATA
TTTGTTTATT TATGGGTGCT TGTACTATTC CAGGTAGATG TGTAATCGTT
ACAGAATTAG TACCAAAAGG AAATTTAGAA ACACTTTTAC ATGATCAAAA
AATTCAATTA CCATTATATT TAAGAATGAG AATGGCAAGA GATGCAGCAT
TAGGAATTAA TTGGTTACAT GAATCAAACC CTGTATTTGT ACATAGAGAT
ATTAAATCAT CAAATCTTTT AGTTGATGAA AATATGAGAG TCAAAATTTG
TGATTTTGGT TTAAGTGCAT TAAAACAAAA ACATAAA--- -------TTC
AAAGAGATCA CTAGTGCATT GGATCATGTT ATCATTGATG CCGCTATCTC
TGATTTGAAT GGTAGAGACT TTTGGAAGAA ATCTTTCCTC ACCGAGCAAG
AGGTACCTTG GGAGGCATTC ATTGATGCAC TTTGCAATTG GTCAAAGGCA
CCAGCTCGTA ATCAATGTGA TAAAACTTCA ATCGACTATT TAAATATCAA
ATGTTTGAAA GCAGTTTTGG CAGAATCTCC AAAATCTGAA GGTACTGGTG
TTGAAACCGT TGTAAACATT GAAAAGTTTG GTAAGATTTT AGAGTTTTTC
GGTCCAGTAC CTGAACCAGC TCCAGGTCAT TCAATTATGG ACACTGTTAG
AGAGATTCTC TCTCAAAAAT GGTTCCATGG TGATTTAGAC ACCACTGAAG
CAGCTTCACG TTTAAATGGT CAACCAATTG GCTCATTTTT AATTCGTTTC
AGTTCAACCA ATGCCGGTTG TTTCACCATT TCTCAAGTGG TCGATGGTGG
CTCAATTAAA CATCAAAGAG TCTCAAGACA AGGCGTTAAA TTTAACTACC
AAAATGTAAT TTACAACAGT CTCATTGAAA TCGTCAGTAA AAATGGTGGT
GGTGCTAATG GTGACGTTAA ATTAGATTCT CAATTAGGTG TTCCAAATTA
TAAATTTATG TCTTTATTCT GTGTATTAAA TAAAGAATCA GAAGTTTACC
AATAAATA

Translated Amino Acid Sequence SFE710

i**yntklcilinfldffifkkklfk*lnry*k*NKMDSGLGSSYPEERSGPPEIRPEEI
NFEELIGTGSFGKVYKGRCRQKAVAVKLLHKQNFDAATLSAFRKEVHLMSKIYHPNICLF
MGACTIPGRCVIVTELVPKGNLETLLHDQKIQLPLYLRMRMARDAALGINWLHESNPVFV
HRDIKSSNLLVDENMRVKICDFGLSALKQKHK---

---FKEITSALDHVIIDAAISDLNGRDFWKKSFLTEQEVPWEAFIDALCNWSKAPARNQC
DKTSIDYLNIKCLKAVLAESPKSEGTGVETVVNIEKFGKILEFFGPVPEPAPGHSIMDTV
REILSQKWFHGDLDTTEAASRLNGQPIGSFLIRFSSTNAGCFTISQVVDGGSIKHQRVSR
QGVKFNYQNVIYNSLIEIVSKNGGGANGDVKLDSQLGVPNYKFMSLFCVLNKESEVYQ*i

Homology SFE710 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SFE710 (SFE710Q) /CSM/SF/SFE7-A/SFE710Q.Seq.d/                       2413   0.0
CFC750 (CFC750Q) /CSM/CF/CFC7-C/CFC750Q.Seq.d/                       1396   0.0
VFF386 (VFF386Q) /CSM/VF/VFF3-D/VFF386Q.Seq.d/                       1394   0.0
CFK162 (CFK162Q) /CSM/CF/CFK1-C/CFK162Q.Seq.d/                       1340   0.0
VFO205 (VFO205Q) /CSM/VF/VFO2-A/VFO205Q.Seq.d/                       1316   0.0
SSL638 (SSL638Q) /CSM/SS/SSL6-B/SSL638Q.Seq.d/                       1316   0.0
CFB626 (CFB626Q) /CSM/CF/CFB6-B/CFB626Q.Seq.d/                       1308   0.0
SFC780 (SFC780Q) /CSM/SF/SFC7-D/SFC780Q.Seq.d/                       1306   0.0
AFD569 (AFD569Q) /CSM/AF/AFD5-C/AFD569Q.Seq.d/                       1306   0.0
AFI789 (AFI789Q) /CSM/AF/AFI7-D/AFI789Q.Seq.d/                       1300   0.0

Homology SFE710 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


BU582405|BU582405.1 PL N82 P.lunula ZAP-cDNA library Pyrocys...    68   8e-21  5
AJ297966|AJ297966.1 Dictyostelium discoideum mRNA for SHK1 p...    46   1e-14  5
AC116960|AC116960.2 Dictyostelium discoideum chromosome 2 ma...    38   6e-06  14
AC116988|AC116988.2 Dictyostelium discoideum chromosome 2 ma...    40   2e-04  15
AC115584|AC115584.2 Dictyostelium discoideum chromosome 2 ma...    38   0.005  7
AE014841|AE014841.1 Plasmodium falciparum 3D7 chromosome 11 ...    34   0.006  15
AP006628|AP006628.1 Onion yellows phytoplasma DNA, complete ...    38   0.012  22
AL929352|AL929352.1 Plasmodium falciparum strain 3D7, chromo...    34   0.018  15
AE014820|AE014820.1 Plasmodium falciparum 3D7 chromosome 14 ...    44   0.019  14
CA838176|CA838176.1 MCT013F12_166283 Ice plant Lambda Uni-Za...    52   0.021  1

Homology SFE710 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54Y55) RecName: Full=Dual specificity protein kinase shkC;    ...   476   e-132
(Q54RB7) RecName: Full=Dual specificity protein kinase shkA;    ...   207   1e-51
AY099792_1(AY099792|pid:none) Arabidopsis thaliana MAP kinase, p...   155   4e-36
AC012679_7(AC012679|pid:none) Arabidopsis thaliana chromosome 1 ...   154   1e-35
EF014094_1(EF014094|pid:none) Synthetic construct HA-tagged prot...   154   1e-35
AC139526_35(AC139526|pid:none) Medicago truncatula clone mth2-9b...   152   6e-35
AP005297_10(AP005297|pid:none) Oryza sativa Japonica Group genom...   150   2e-34
AP008212_700(AP008212|pid:none) Oryza sativa (japonica cultivar-...   149   5e-34
T52626(T52626) probable mitogen-activated protein kinase MAP3K d...   147   1e-33
AY075641_1(AY075641|pid:none) Arabidopsis thaliana AT5g11850/F14...   147   1e-33

Homology SFE710 vs Genome