Dictyostelium discoideum cDNA Clone SFE454

Sequence SFE454

AAATAATAAT AAAAATTAGA TTAAAATGAG ACTATATTTA TTATCGCTAA
TATTAGTGTT TTATGCTAGT GTATCAAGTG CTTCACTTGA TAGTGTAAAT
TTTGGTAGAG GCGGTGGCTG GGGAAGTGGA AACCAAGGTG TACTTTGTGG
AACACATTAT TGTCCACCAG GTTCAACTTG TGAAAGTAAA CATGGTCACT
ATATTTGTAG ACCAGGTGGT TTAATAACTG CTCCAAGTGG TGGTGATAGT
GGTGGTATTT GGACAGGTGG TGATAAACAT AAAAAAGATT GTGGTGGCAC
AGGATGTTGT AAAGAAGGTC AATATTGTNC CAAACTTGAT GGAAAAGAAC
AATGTGTATA TTATCCAGAT GACAAAGGTC CACAATGTGG TGGTTCATTC
TG-------- --TGCTAAAC CAGTTCAACA TAACGCCCAA CAACAACATG
CCAAACCAGC TCAACATGCC GCTCAACAAC AACATGCCAA ACCAGCTCAA
CATGTCGCTC AACAACAACA ACAACAACAC GCCAAACCAG GCTGCTCATA
CTGCTGCCAA ACCAGTTCAA CATAATGCCC AACAACAACA TGCTAAACCA
GCTGCTCATA CTGCTGCCAA ACCAGTTCAA CACAATGCTG CTCAACAACA
TGCTAAACCA GCTGCCCATG GCGCCAAACC AGCTGTTAAT GCTGCCAGAC
CAGTTCAACA CAATGCTGCT CAACAACATG CTAAACCAGC TGCTCATACT
GCTGCCAAAC CAGTTCAACA CAATGCTGCT CAACAACATG CTAAACCAGC
TGCCAAACCA GCCAAATTAA CCAATGCCCA AAAATTACAA CAAGAACACC
AAAGACAAGA AGCTCTCGCA AAACAACAAG CTCGTATTAG ACAACAAAAT
CTTGTCAAAC AAGCTGCCCA AAAGAAACAA ACCTCTCAAC GTGCTGCCTC
TAAAAATCAA GCTAGACCAG CAACTCAAAA GAGAAATTAA ATTTATTATT
TAGTATAATT ATACAATTGA AAAATTATAA ATTGAGATTT CTTTTTGTTG
GTGATAGGTA TTCAATAGAT ACACGAACTT TCAAATCATT TTTCAATTTC
TTTTATTTAC CAATTGTTAA AACTCATTTT ATTTTATTTT TATCTCTTAC
ATATCTCTTT TTCTATTAAT AATAAA

Translated Amino Acid Sequence SFE454

nnnkn*IKMRLYLLSLILVFYASVSSASLDSVNFGRGGGWGSGNQGVLCGTHYCPPGSTC
ESKHGHYICRPGGLITAPSGGDSGGIWTGGDKHKKDCGGTGCCKEGQYCXKLDGKEQCVY
YPDDKGPQCGGSF---

---LNQFNITPNNNMPNQLNMPLNNNMPNQLNMSLNNNNNNTPNQAAHTAAKPVQHNAQQ
QHAKPAAHTAAKPVQHNAAQQHAKPAAHGAKPAVNAARPVQHNAAQQHAKPAAHTAAKPV
QHNAAQQHAKPAAKPAKLTNAQKLQQEHQRQEALAKQQARIRQQNLVKQAAQKKQTSQRA
ASKNQARPATQKRN*iyylv*lyn*kiin*dffllvigiq*ihelsnhfsisfiyqllkl
ilfyfyllhisfsinnk

Homology SFE454 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SFE454 (SFE454Q) /CSM/SF/SFE4-C/SFE454Q.Seq.d/                       1181   0.0
SLB726 (SLB726Q) /CSM/SL/SLB7-B/SLB726Q.Seq.d/                       1166   0.0
SHJ113 (SHJ113Q) /CSM/SH/SHJ1-A/SHJ113Q.Seq.d/                       1166   0.0
SFJ571 (SFJ571Q) /CSM/SF/SFJ5-C/SFJ571Q.Seq.d/                       1166   0.0
SFH246 (SFH246Q) /CSM/SF/SFH2-B/SFH246Q.Seq.d/                       1166   0.0
SFB772 (SFB772Q) /CSM/SF/SFB7-C/SFB772Q.Seq.d/                       1166   0.0
CFJ772 (CFJ772Q) /CSM/CF/CFJ7-C/CFJ772Q.Seq.d/                       1166   0.0
CFJ668 (CFJ668Q) /CSM/CF/CFJ6-C/CFJ668Q.Seq.d/                       1166   0.0
CFI839 (CFI839Q) /CSM/CF/CFI8-B/CFI839Q.Seq.d/                       1166   0.0
CFC463 (CFC463Q) /CSM/CF/CFC4-C/CFC463Q.Seq.d/                       1166   0.0

Homology SFE454 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC117075|AC117075.2 Dictyostelium discoideum chromosome 2 ma...  1160   0.0    16
X57149|X57149.1 D.discoideum EB4 gene for prespore vesicle p...   898   0.0    9
M11028|M11028.1 Slime mold (D.discoideum) prespore EB4 gene.      206   5e-72  5
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma...    36   1e-09  20
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma...    34   1e-06  18
AC117176|AC117176.2 Dictyostelium discoideum chromosome 2 ma...    36   2e-06  13
AE014840|AE014840.1 Plasmodium falciparum 3D7 chromosome 11 ...    40   7e-05  14
AL161660|AL161660.11 Human DNA sequence *** SEQUENCING CANCE...    46   1e-04  2
AC005140|AC005140.8 Plasmodium falciparum chromosome 12 clon...    36   3e-04  16
AC116977|AC116977.2 Dictyostelium discoideum chromosome 2 ma...    32   3e-04  15

Homology SFE454 vs Protein

Sequences producing significant alignments:                      (bits) Value


S28358(S28358;S20090) prespore vesicle protein - slime mold (Dic...   212   3e-53
(P08798) RecName: Full=Prespore vesicle protein;          Short=...   212   3e-53
FN392319_558(FN392319|pid:none) Pichia pastoris GS115 chromosome...    39   0.57
CP001635_1549(CP001635|pid:none) Variovorax paradoxus S110 chrom...    38   0.97
(Q54G96) RecName: Full=Uncharacterized protein DDB_G0290301;           38   0.97
FQ670204_749(FQ670204|pid:none) Haemophilus influenzae F3047 gen...    38   1.3
CP002277_187(CP002277|pid:none) Haemophilus influenzae R2866, co...    38   1.3
U32470_3(U32470|pid:none) Haemophilus influenzae tolQRAB gene cl...    38   1.3
AE017194_2199(AE017194|pid:none) Bacillus cereus ATCC 10987, com...    37   1.7
AP008207_3128(AP008207|pid:none) Oryza sativa (japonica cultivar...    37   2.2

Homology SFE454 vs Genome