Dictyostelium discoideum cDNA Clone SFE226

Sequence SFE226

---------- GCCAAACAAG GTGATAACTC TGGTGATTTA TTCTGTCAAT
CAAATTTCAA CAAAGTCCAA GGTGACACTT GTTCAGTCCA CGGTTNTTCA
TTTGTTCAAT TAGGTTCTGG TTTCCGTTAC GAATGTGCTG CTACTTTAGT
TTGCCAAGCT GGTACCTGTC AATNTCCACA AAACTCAATC CCAACTGGTG
ATTGTATGGA TATCGCCAAC TCTTGTCCAT CAGCATATGG TTCAAGTTGC
CAATGTACTT NTACCTCACA AATTATAACT GGTAAATGCA CTGCTAGTCC
ATTCAACTTG GCTTCAAATT GTCAAACCTC TGTCCAAAAC TTGGCCACAT
GTGCTATTGA ACATGAATGT CCAAGCATTG AAAATATCGA ATTAGGTCCA
GATTCATGTC TCATGAAACA CTGTAGATCT GAAATCTGTG ATAACAATAA
TTGTATTGTT CAAACAAACA CNTGTGGTGA TGCACCAGTT TACCCAGTTT
GTAACACCCC ATCATCTTCA TCTGTTATTT TGCCATCATT TGTCTTATTA
ANTGTTGCCA TTATTGCTTT ATTATTCTAA AAATTTTATT AAAAACAAAA
TAAAATTATT TAAAAAATCG A

Translated Amino Acid Sequence SFE226

---KQGDNSGDLFCQSNFNKVQGDTCSVHGXSFVQLGSGFRYECAATLVCQAGTCQXPQN
SIPTGDCMDIANSCPSAYGSSCQCTXTSQIITGKCTASPFNLASNCQTSVQNLATCAIEH
ECPSIENIELGPDSCLMKHCRSEICDNNNCIVQTNTCGDAPVYPVCNTPSSSSVILPSFV
LLXVAIIALLF*kfy*kqnkii*ki

Homology SFE226 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFI776 (VFI776Q) /CSM/VF/VFI7-D/VFI776Q.Seq.d/                       1035   0.0
SLC529 (SLC529Q) /CSM/SL/SLC5-B/SLC529Q.Seq.d/                       1035   0.0
SFE226 (SFE226Q) /CSM/SF/SFE2-B/SFE226Q.Seq.d/                       1035   0.0
SFC278 (SFC278Q) /CSM/SF/SFC2-D/SFC278Q.Seq.d/                       1035   0.0
FC-BI21 (FC-BI21Q) /CSM/FC/FC-BI/FC-BI21Q.Seq.d/                     1019   0.0
VFI528 (VFI528Q) /CSM/VF/VFI5-B/VFI528Q.Seq.d/                        950   0.0
SLB206 (SLB206Q) /CSM/SL/SLB2-A/SLB206Q.Seq.d/                        607   e-173
FC-IC1493 (FC-IC1493Q) /CSM/FC-IC/FC-IC1493Q.Seq.d/                   559   e-158
FC-IC1419 (FC-IC1419Q) /CSM/FC-IC/FC-IC1419Q.Seq.d/                   559   e-158
FC-IC0719 (FC-IC0719Q) /CSM/FC-IC/FC-IC0719Q.Seq.d/                   559   e-158

Homology SFE226 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AB079606|AB079606.1 Dictyostelium discoideum Dd-gdcA gene, c...  1035   0.0    1
AB079253|AB079253.1 Dictyostelium discoideum Dd-gdcA mRNA, c...  1035   0.0    1
AC134747|AC134747.2 Rattus norvegicus clone CH230-354L3, WOR...    44   0.58   3
AC095795|AC095795.7 Rattus norvegicus clone CH230-9F18, *** ...    44   0.90   4
AP006138|AP006138.1 Lotus corniculatus var. japonicus genomi...    30   4.1    2
AC137618|AC137618.1 Oryza sativa (japonica cultivar-group) c...    38   4.5    3
BH654517|BH654517.1 BOMJY27TR BO_2_3_KB Brassica oleracea ge...    36   8.9    2
AC142341|AC142341.1 Pan troglodytes BAC clone RP43-43C1 from...    42   8.9    1
AC092134|AC092134.4 Homo sapiens chromosome 16 clone RP11-26...    42   8.9    1
BX890602|BX890602.1 Zebrafish DNA sequence *** SEQUENCING IN...    42   8.9    1

Homology SFE226 vs Protein

Sequences producing significant alignments:                      (bits) Value


AB079253_1(AB079253|pid:none) Dictyostelium discoideum Dd-gdcA m...   371   e-101
FN650140_1114(FN650140|pid:none) Legionella longbeachae NSW150, ...    46   0.001
M33753_1(M33753|pid:none) D.melanogaster crumbs protein mRNA, co...    42   0.022
(P10040) RecName: Full=Protein crumbs; AltName: Full=95F; Flags:...    42   0.022
(Q94494) RecName: Full=Protein psiH; Flags: Precursor;  &U67940_...    40   0.063
S18188(S18188)notch protein homolog - rat                              40   0.083
AM502222_18(AM502222|pid:none) Leishmania infantum chromosome 4....    40   0.11
AB100603_1(AB100603|pid:none) Mus musculus Notch1 gene for trans...    40   0.11
AB100603_2(AB100603|pid:none) Mus musculus Notch1 gene for trans...    40   0.11
(Q01705) RecName: Full=Neurogenic locus notch homolog protein 1;...    40   0.11

Homology SFE226 vs Genome