Dictyostelium discoideum cDNA Clone SFC584

Sequence SFC584

CATCATCATC ATCAACAACA ACAACAACAA CCAATAACTA CAACCACTAC
AACCACTACA ACAATACCAT CAACTCCACA ACCATCTCAA CAATCTATGA
CAAATAGTGG TGGTAGTAGT AGTACTAATA GTTCAATTAG TAGAAAAAAT
AAATTTGCAA AATGGAATAC CAATCCATTT ATGGAAGAAG TTATTTATAC
CAATAATAAA GTTGGTATTA ATACAACTAC ACCAACTCAA GCACTCGCTG
TAAATGGTAA TATTTTAGTA ACTGGTGAAT TATTTAAACC ATCAGATCAA
AGAATTAAAT CAAATATTCG TCTTGATAAT ACTGATCATT GGGATAAAAT
CAATCGTTTG AAAATCTATG ATTATGATCG TAAGAAAATG ATGGGTTATG
ATGATCCAAA TAATAATGGT ACCACTCAAG AGAGTACAAC TGTAAAGGAA
AAAGGTTTCT TGGCTCAAGA GGTTAAAGAA GTACTACCAA ATGCTGTTAA
AGTCGCTGGT GAAGTAAAAC TACAAAGATG GTACCACTGT TCCAAATCTT
TTGGTTGTAA ATGATCGTGT ACTATTATTG GAAAATATTG GTGCCACTCA
ACAAATTGGT AGATCCTTAA AGAAAGAGAA AGATCACATT GTAAAGATTG
ATCGTGATCT TGATCGTGTT AAAATTGAAG GTTCTCGTGA AAAACATGTT
ATTCTCACAA GAATGCAAGA TATGGTCAAT TTTATGCACT CTGAAGAGAG
TGAACGTTCA AACAATAACA ACGAAGAATC TTGTGTCTAT TGTAGTTTAA
TGGGTTTTGG TCCAGCTTGG ACAATGTTTG TTTTCGGTTT CTTTATTCCA
ATTTGTTGGA TCATTGGTAG TTTCTATCTA TTCTCTCCAA CTCGTGTCAA
ATGGGTAAGT GGTCTAATGA ATTTCGTTGC TACCATCATC TTTATTTTAG
CTCTCTCTTT GATGACTTTT TACGTTCCAG AATTGGCTGC CCTTATCATT
GCTCCTGCTT TAATTGTTAT GGGTTTTGTA GTTTGTATTC TAGTCGGTTT
CTTTAGACAA AGAAATAGAG AAAAGAAACG TTATCTCCGT GAAAGAATTA
AGTTAATGCA AGCTGAGGTT ACAAAAATTG GCGACCATGT TAGAGCTTTA
GAGTNATACA ACCAACATCA AGCAAAAGCA AA

Translated Amino Acid Sequence SFC584

iiiinnnnnnq*lqplqplqqyhqlhnhlnnl*qivvvvvvlivqlvekinlqngipihl
wkklfipiiklvliqlhqlkhsl*mvif**lvnylnhqikelnqifvliiliigiksiv*
ksmimivrk*wvmmiqiimvplkrvql*rkkvswlkrlkkyyqmllkslvk*NYKDGTTV
PNLLVVNDRVLLLENIGATQQIGRSLKKEKDHIVKIDRDLDRVKIEGSREKHVILTRMQD
MVNFMHSEESERSNNNNEESCVYCSLMGFGPAWTMFVFGFFIPICWIIGSFYLFSPTRVK
WVSGLMNFVATIIFILALSLMTFYVPELAALIIAPALIVMGFVVCILVGFFRQRNREKKR
YLRERIKLMQAEVTKIGDHVRALEXYNQHQAKA

Homology SFC584 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


SFC584 (SFC584Q) /CSM/SF/SFC5-D/SFC584Q.Seq.d/                       2210   0.0
SLA584 (SLA584Q) /CSM/SL/SLA5-D/SLA584Q.Seq.d/                       1368   0.0
SSA348 (SSA348Q) /CSM/SS/SSA3-B/SSA348Q.Seq.d/                        785   0.0
VHI774 (VHI774Q) /CSM/VH/VHI7-D/VHI774Q.Seq.d/                        551   e-156
AHN423 (AHN423Q) /CSM/AH/AHN4-A/AHN423Q.Seq.d/                        242   1e-62
VHQ172 (VHQ172Q) /CSM/VH/VHQ1-C/VHQ172Q.Seq.d/                        204   2e-51
VHE577 (VHE577Q) /CSM/VH/VHE5-D/VHE577Q.Seq.d/                         98   4e-19
SSL489 (SSL489Q) /CSM/SS/SSL4-D/SSL489Q.Seq.d/                         48   3e-04
SSL401 (SSL401Q) /CSM/SS/SSL4-A/SSL401Q.Seq.d/                         48   3e-04
VFH812 (VFH812Q) /CSM/VF/VFH8-A/VFH812Q.Seq.d/                         42   0.019

Homology SFC584 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ399640) Dictyostelium discoideum cDNA clone:dds6g21, 3' e...  1352   0.0    1
(AU060213) Dictyostelium discoideum slug cDNA, clone SLA584.     1174   0.0    2
(BJ388697) Dictyostelium discoideum cDNA clone:dds6g21, 5' e...   662   0.0    2
(BJ423312) Dictyostelium discoideum cDNA clone:ddv48d19, 5' ...   498   e-136  1
(AU072597) Dictyostelium discoideum slug cDNA, clone SSA348.      468   e-127  1
(BJ337372) Dictyostelium discoideum cDNA clone:dda57n06, 5' ...   188   4e-43  1
(BJ446742) Dictyostelium discoideum cDNA clone:ddv63o17, 3' ...   153   1e-42  3
(BJ355468) Dictyostelium discoideum cDNA clone:dda57n06, 3' ...   147   3e-38  2
(BJ439559) Dictyostelium discoideum cDNA clone:ddv40i19, 3' ...    62   6e-13  2
(BJ442076) Dictyostelium discoideum cDNA clone:ddv48d19, 3' ...    60   2e-12  2

Homology SFC584 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54B29) RecName: Full=Uncharacterized membrane protein DDB_G029...   323   e-159
AF038536_1(AF038536|pid:none) Homo sapiens Best's macular dystro...    79   7e-13
AK141695_1(AK141695|pid:none) Mus musculus 9 days embryo whole b...    78   1e-12
AK039649_1(AK039649|pid:none) Mus musculus adult male spinal cor...    78   1e-12
BC157942_1(BC157942|pid:none) Mus musculus gene model 98, (NCBI)...    78   1e-12
AB023171_1(AB023171|pid:none) Homo sapiens mRNA for KIAA0954 pro...    76   3e-12
(Q9Y2G1) RecName: Full=Myelin gene regulatory factor;  &AB385408...    76   3e-12
AF086762_1(AF086762|pid:none) Homo sapiens C11orf9 mRNA, complet...    76   3e-12
AK144411_1(AK144411|pid:none) Mus musculus adult male intestinal...    75   9e-12
BC148934_1(BC148934|pid:none) Bos taurus hypothetical protein LO...    74   2e-11

Homology SFC584 vs Genome