Dictyostelium discoideum cDNA Clone FCL-AB08

Size:		2.5K
3' sequence:	HS960917
5' sequence:	HS961102
Whole insert?:	*
Accession #:	*
Remarks:	*

Sequence FCL-AB08

AACTTTTAAA ACAAATAATT TAAATAAAAA AATAAAAAAA TAAAAAATAA
AAAAATGATT AATATTGAAG ATATTTCAAA ATCTTCAAAC CAAAGTGAAG
AAAAACAATT AAAAAGTACA AGTTCAAAAC CAAAATACTC ATTCGCAGCA
AAAAGTTTAT TCAAAGGTTC AAATAATATT ACACCATATT ATTTATCAAC
CAGTAATACA TTCCAATGTG TAGCATCTGA GTCAATTCAA ACATGGCTTC
TTTCAGATGA TGGTCATATC TTTACATCCA GTGGTAATTT TGTTTTAGAT
GTTTCATCAG GTGGTTATTT TGTTGAATTA GTACAACTTA ATTCAAATTC
AAAAACTCAA ATTTGGACAA TTGATACAAC AAATAATAAA ATTCAAAACC
AAGGTAATGG TAAATACCTT GATATCGACA ATTTGAATAT TTGTGTTGCA
CCTCTAAATG GAAACGCAAC TCAACAATGG ACAACTTTTA GAAGAGCACC
AATTCCAACT GGTAATTGGG GTTACTTTCA AAGCAAACAA ATGGATTCAA
ATAATAATTA TTGGGGTTTA AGTGTATTAA ATAATAGTAA ATCATATAAT
ACTAGTGTAG TAATGAATAA AGTTCAAGCA AA-------- --CCTCCAAA
GGAATTGACC GATAAGTTAT GGAATAATGG GGTTTCAAAA CAAGAATTTT
TCTGGTCAGC TTATGGTTGG AATTTAGCTA CCTCACTCAC CTATTACAAT
ATGGCAAACA AGTTTGGTAA TATCTATAAA TTAGCTTTTC CAACAATTAA
AAATTTTACA GGAGTACCAA TGCAATTTGT AATGACCAAT GATGGTGATA
ATCTTTGTAA TTTCCCAGTC AAAACTCATT TTGCAAAATT TTTTTCTATA
TATTACAGTT GTGGAGATCT TGGTCATCAT TATTTCGACA TTGCCGTAAA
TGATATTAAC GATAACAAGG TTGCAAATTT CACAGTTGAT ATTAATTTAG
AAGCTATTGA AGGAAGTTAT GTTTCAATCA AAACTGGTTC ATTAGTTGTT
CAGCCAGGTT ATGCTGTTGG TAATCCAATT TGTAATCAAG GTAGTTATTC
TCTAATGTTT TCTGCTTCAA TTTTAATTCC AATTTATAAA TCAGAATAAA
AAATAAAATT ATCGGAATAT AAAAATCAAT TTATATTCTT TTCAATTATT
AAAAATTAAA AATAAAATAA AATAAAATCC TTAATCGACT ATAAAAAAAA
AAA

Translated Amino Acid Sequence FCL-AB08

nf*nk*fk*KNKKIKNKKMINIEDISKSSNQSEEKQLKSTSSKPKYSFAAKSLFKGSNNI
TPYYLSTSNTFQCVASESIQTWLLSDDGHIFTSSGNFVLDVSSGGYFVELVQLNSNSKTQ
IWTIDTTNNKIQNQGNGKYLDIDNLNICVAPLNGNATQQWTTFRRAPIPTGNWGYFQSKQ
MDSNNNYWGLSVLNNSKSYNTSVVMNKVQA---

---PPKELTDKLWNNGVSKQEFFWSAYGWNLATSLTYYNMANKFGNIYKLAFPTIKNFTG
VPMQFVMTNDGDNLCNFPVKTHFAKFFSIYYSCGDLGHHYFDIAVNDINDNKVANFTVDI
NLEAIEGSYVSIKTGSLVVQPGYAVGNPICNQGSYSLMFSASILIPIYKSE*kiklseyk
nqfiffsiikn*k*nkikslidykkk

Homology FCL-AB08 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FCL-AB08 (FCL-AB08Q) /CSM/FCL/FCL-AB/FCL-AB08Q.Seq.d/                2006   0.0
VHL659 (VHL659Q) /CSM/VH/VHL6-C/VHL659Q.Seq.d/                       1144   0.0
VHD140 (VHD140Q) /CSM/VH/VHD1-B/VHD140Q.Seq.d/                       1144   0.0
VHC670 (VHC670Q) /CSM/VH/VHC6-C/VHC670Q.Seq.d/                       1144   0.0
VHC206 (VHC206Q) /CSM/VH/VHC2-A/VHC206Q.Seq.d/                       1144   0.0
VHI685 (VHI685Q) /CSM/VH/VHI6-D/VHI685Q.Seq.d/                       1138   0.0
VHM139 (VHM139Q) /CSM/VH/VHM1-B/VHM139Q.Seq.d/                       1128   0.0
VHJ768 (VHJ768Q) /CSM/VH/VHJ7-C/VHJ768Q.Seq.d/                       1108   0.0
SHG311 (SHG311Q) /CSM/SH/SHG3-A/SHG311Q.Seq.d/                       1090   0.0
VHB322 (VHB322Q) /CSM/VH/VHB3-A/VHB322Q.Seq.d/                       1078   0.0

Homology FCL-AB08 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AY282568) Dictyostelium discoideum calcium up-regulated pro...   488   0.0    5
(AY282572) Dictyostelium discoideum calcium up-regulated pro...   416   0.0    7
(AY282573) Dictyostelium discoideum calcium up-regulated pro...   357   0.0    7
(AY282574) Dictyostelium discoideum calcium up-regulated pro...   400   0.0    8
(AY282569) Dictyostelium discoideum calcium up-regulated pro...   400   0.0    8
(AY282571) Dictyostelium discoideum calcium up-regulated pro...   400   0.0    8
(BJ437713) Dictyostelium discoideum cDNA clone:ddv35k02, 3' ...   488   0.0    2
(BJ354103) Dictyostelium discoideum cDNA clone:dda52d18, 3' ...   488   0.0    2
(BJ442599) Dictyostelium discoideum cDNA clone:ddv50k12, 3' ...   488   0.0    2
(BJ406674) Dictyostelium discoideum cDNA clone:dds36f03, 3' ...   488   0.0    2

Homology FCL-AB08 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q7Z202) RecName: Full=Calcium up-regulated protein C;  &AY28256...   374   e-102
(Q7Z1I0) RecName: Full=Calcium up-regulated protein F;                370   e-101
AY282572_1(AY282572|pid:none) Dictyostelium discoideum calcium u...   370   e-101
AY282574_1(AY282574|pid:none) Dictyostelium discoideum calcium u...   369   e-100
(Q55FW5) RecName: Full=Calcium up-regulated protein A;                369   e-100
(Q7Z1Z9) RecName: Full=Calcium up-regulated protein G;  &AY28257...   366   1e-99
(Q54Z20) RecName: Full=Putative calcium up-regulated protein J;        64   2e-08
CP002631_1314(CP002631|pid:none) Treponema succinifaciens DSM 24...    40   0.37
GU951535_1(GU951535|pid:none) Camellia sinensis putative type 2 ...    39   0.48
AY149015_1(AY149015|pid:none) Plasmodium chabaudi chabaudi PC13A...    39   0.82

Homology FCL-AB08 vs Genome