Dictyostelium discoideum cDNA Clone FCL-AA13

Size:		1.5K
3' sequence:	HS960914
5' sequence:	HS961102
Whole insert?:	*
Accession #:	-
Remarks:	*

Sequence FCL-AA13

CATATTTATA ATTATATCTT TTTTGTTTAA TAAAAAAGAA AGAATACCAA
CATGAGACTT TTATTGTGTT TAATTTTCTT AGTTTTTGTT TTCAATTTTG
CATTATCAAC AGTTCATTTC AAAGATACCT TTGATAACGA TTGGGAATCA
AGATGGGTTG TTAGTGATTG GCATAAAGAA GATGGTAAAT CAGGTAAATT
AGTTCATACT GCAGGTAAAT GGTTTGGTGA TGAAAATCAA AAAGGTATTC
AAACTAGTGA AGATGCTCGT TTCTACGCTG TATCAGCTAA ATTCCCAAGT
TTCAGTAACA AAGGTAAAGA TTTAGTTCTC CAATACACTG TAAAGAATGA
ACAAAAAGTT GATTGTGGTG GTTCATACAT CAAGTTATTA CCATCCAAAT
TAGATCAATC AGCATTCGAT GGTGAATCTG AATATTCCAT TATGTTTGGT
CCAGATGTTT GTGGTGCCTC AAAGAGAGTT CACGTCATTC TCAACTACAA
AGGAAAGAAC CATTTAATCA AGAAAGAAAT CAACAAAGTT GAAACCGATC
AATTAACTCA TCAATACACT TTGGTCATTT CACCAGATAA CACCTACAAG
TACTCGTCGA TAACAAAGAG ATCCAAGCAG GTAAC----- -----TCGTC
ACCGACTCTG TCGAAGAAGC TAAAGATTTC TCTGAAAAGA CCTTTGTTGC
CAACCAAGAA GCCGAAAAGA AAATGTTTGA CGACCTCGAA GCCGCCAAAG
CTGAAGAGAG AAAGAAAGCT GACGAAAAAT TAGCTGCCGA AAAAGCTGCT
GAAAAAGAAG CCGAAGAAGC TGATGAAGAA GAAGAAGAAG TCGCTGAAGA
AGATTTAGTT AAAACTGATG ACAAAAAAGA AGAAGTCAAA AAATCAACCA
AAAAAGTTGA TCATGACGAA CTTTAAATGA AATAAATAAA TAATAAAAAA
AAAACAAATA AAAAAAAACT CGTGTTAAAC TAAAAAAAAA AAAAA

Translated Amino Acid Sequence FCL-AA13

hiynyiffv**KRKNTNMRLLLCLIFLVFVFNFALSTVHFKDTFDNDWESRWVVSDWHKE
DGKSGKLVHTAGKWFGDENQKGIQTSEDARFYAVSAKFPSFSNKGKDLVLQYTVKNEQKV
DCGGSYIKLLPSKLDQSAFDGESEYSIMFGPDVCGASKRVHVILNYKGKNHLIKKEINKV
ETDQLTHQYTLVISPDNTYKYSSITKRSKQV---

---VTDSVEEAKDFSEKTFVANQEAEKKMFDDLEAAKAEERKKADEKLAAEKAAEKEAEE
ADEEEEEVAEEDLVKTDDKKEEVKKSTKKVDHDEL*mk*innkkktnkkklvln*kkkk

Homology FCL-AA13 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FCL-AA13 (FCL-AA13Q) /CSM/FCL/FCL-AA/FCL-AA13Q.Seq.d/                1526   0.0
AFN528 (AFN528Q) /CSM/AF/AFN5-B/AFN528Q.Seq.d/                       1245   0.0
AFM264 (AFM264Q) /CSM/AF/AFM2-C/AFM264Q.Seq.d/                       1245   0.0
AFK286 (AFK286Q) /CSM/AF/AFK2-D/AFK286Q.Seq.d/                       1245   0.0
AFK245 (AFK245Q) /CSM/AF/AFK2-B/AFK245Q.Seq.d/                       1245   0.0
AFJ570 (AFJ570Q) /CSM/AF/AFJ5-C/AFJ570Q.Seq.d/                       1245   0.0
AFJ522 (AFJ522Q) /CSM/AF/AFJ5-A/AFJ522Q.Seq.d/                       1245   0.0
AFG840 (AFG840Q) /CSM/AF/AFG8-B/AFG840Q.Seq.d/                       1245   0.0
AFG591 (AFG591Q) /CSM/AF/AFG5-D/AFG591Q.Seq.d/                       1245   0.0
AFE866 (AFE866Q) /CSM/AF/AFE8-C/AFE866Q.Seq.d/                       1245   0.0

Homology FCL-AA13 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU285022) Dictyostelium discoideum gamete cDNA clone:FCL-AA...  1063   0.0    2
(U36937) Dictyostelium discoideum calreticulin mRNA, complet...   991   0.0    4
(BJ416206) Dictyostelium discoideum cDNA clone:ddv25f10, 5' ...   991   0.0    3
(BJ413382) Dictyostelium discoideum cDNA clone:ddv15g11, 5' ...   991   0.0    3
(BJ413330) Dictyostelium discoideum cDNA clone:ddv15i05, 5' ...   991   0.0    3
(BJ412320) Dictyostelium discoideum cDNA clone:ddv7j22, 5' e...   991   0.0    3
(BJ412144) Dictyostelium discoideum cDNA clone:ddv7i05, 5' e...   991   0.0    3
(BJ410850) Dictyostelium discoideum cDNA clone:ddv2h06, 5' e...   991   0.0    3
(BJ409954) Dictyostelium discoideum cDNA clone:ddv10m18, 5' ...   991   0.0    3
(BJ389768) Dictyostelium discoideum cDNA clone:dds20b02, 5' ...   991   0.0    3

Homology FCL-AA13 vs Protein

Sequences producing significant alignments:                      (bits) Value


U36937_1(U36937|pid:none) Dictyostelium discoideum calreticulin ...   347   2e-95
HC747500_1(HC747500|pid:none) Sequence 4591 from Patent WO201004...   218   4e-55
AC133339_28(AC133339|pid:none) Oryza sativa chromosome 3 BAC OSJ...   218   4e-55
AK318734_1(AK318734|pid:none) Arabidopsis thaliana AT1G56340 mRN...   217   7e-55
CP002684_6164(CP002684|pid:none) Arabidopsis thaliana chromosome...   217   7e-55
HC747438_1(HC747438|pid:none) Sequence 4529 from Patent WO201004...   217   9e-55
U27698_1(U27698|pid:none) Arabidopsis thaliana calreticulin (AtC...   217   9e-55
(Q40401) RecName: Full=Calreticulin; Flags: Precursor;  &T16968(...   217   9e-55
HC747456_1(HC747456|pid:none) Sequence 4547 from Patent WO201004...   216   2e-54
BT095029_1(BT095029|pid:none) Soybean clone JCVI-FLGm-14H10 unkn...   215   3e-54

Homology FCL-AA13 vs Genome