<List of Series> <Series: FC-BT> <Clone: FC-BT04> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>

Dictyostelium discoideum cDNA Clone FC-BT04

Dictyostelium discoideum cDNA Project Home
Size:		1.8K
3' sequence:	CY980512
5' sequence:	KS980518
Whole insert?:	*
Accession #:	*
Remarks:	*

Sequence FC-BT04

AAATAGTGCT ACCTTTATAA AATATATGGA CTTATCAGAT TCAGGTCCTA
TATTTTTTAG AACTATTACA AATCCATTCA TATATTTTTA CAATGATACA
AATATTAATA AGATTTCCAT TACTTGTAAA AATGAAATTT TTGGTTCAAA
TTCTATACCA CCACAATTAT TATCATTTTC TTCCTCAACA AGCCAATTGG
ATGTTGGATT AATCAATAAA GTTGATTTTG ATTTTGATTC ATTTGATGAT
TTAGGTATTA AAGAAAATCA ATTCCCAATT GTTTATCTTT CAACAAGAAA
ATATGAAACC ATTCAATGTA TTTCAAGGAA CACTTCAATT TTTGATAAAT
CTACAAGATT TAGATGTTCA ATTGAAATTC CAATTGGATT TGGATATCCA
AATGGAATTT TATTATCAGT GTATGGTTTT ATAAATAATG GTGGTTATTT
TAGTGGTTTT TGTTCACAAC AATTACTTGA AATGAATTTT TCAAATTTTA
TCTCAACTAA TGGCACATTT ACACTTGATC AACCATATAT TAAAAGTTCA
AATAAAATTT CAAATCTTGG AGGTAATTTA TGGATTTTTG GTAGAGGTTT
TGGAGTGAAT TGTACTGTTT GGGTAAGATA TATTGATGAT ATTGGTTTTA
ATCAATGTGT A--------- -GAATGAATC CATCATCAAT TAAATATACA
GTTAATATTA CAAGTTATTC ATTCGCTCAA AATCTTAACC ATCTTCAATT
GATTATGTCT GCATCATTAC AATCCTCTAA AACTGATGAT ATATGCTCTT
CAAAATTATT TGGTAATACT AGCGATGGCG ATAATTCAAA CTTTATGAAA
CTAAAAGTAA ATGATCATTC AGTATATGGT AGATTTATTA AACGTGCTAT
TGTTGATAAT AAAATTATCT CTGTCGATAA TAGTATTTTA GATGATTCAA
TAAATCCAGA TTCAAATTCT CATAAATCTG AAACATTTAT TGGTATCTCA
ATTCCATTTT ATAGTGATAG TGTATTGGTT GATCCTGATT TCTCTCTCCT
TATCGATAAT AGTCCCGCAT CTTCAAATGA TGAAAATTCA ATTTGTGCAT
CCTCTTCCTC AAAATTATCA AAAGTACAAA TTGCTGGTAT TATAATAGGT
TCGGTTGGTT TTACTGCTGT GGCCATAATT TCAACTATTT ACATTATTAG
AAAAAGAAAA GAACAACAAA CAATTATAAA CAAAATGAAG AGAGTTAGCC
AATCAGTGAA TTAGCCATCA AAAAATAAAA AAATAAAAAA AAAAATAAAA
AAAAAAATAA AAAATAAAAA AAATAAAAAA AAAAATAA

Translated Amino Acid Sequence FC-BT04

<All Frames> 
NSATFIKYMDLSDSGPIFFRTITNPFIYFYNDTNINKISITCKNEIFGSNSIPPQLLSFS
SSTSQLDVGLINKVDFDFDSFDDLGIKENQFPIVYLSTRKYETIQCISRNTSIFDKSTRF
RCSIEIPIGFGYPNGILLSVYGFINNGGYFSGFCSQQLLEMNFSNFISTNGTFTLDQPYI
KSSNKISNLGGNLWIFGRGFGVNCTVWVRYIDDIGFNQCV---

---MNPSSIKYTVNITSYSFAQNLNHLQLIMSASLQSSKTDDICSSKLFGNTSDGDNSNF
MKLKVNDHSVYGRFIKRAIVDNKIISVDNSILDDSINPDSNSHKSETFIGISIPFYSDSV
LVDPDFSLLIDNSPASSNDENSICASSSSKLSKVQIAGIIIGSVGFTAVAIISTIYIIRK
RKEQQTIINKMKRVSQSVN*psknkkikkkikkkiknkknkkkn


Homology FC-BT04 vs CSM-cDNA

<more CSM info> 
Sequences producing significant alignments:                      (bits) Value


FC-BT04 (FC-BT04Q) /CSM/FC/FC-BT/FC-BT04Q.Seq.d/                     2456   0.0
FC-BS23 (FC-BS23Q) /CSM/FC/FC-BS/FC-BS23Q.Seq.d/                     1201   0.0
VSF830 (VSF830Q) /CSM/VS/VSF8-B/VSF830Q.Seq.d/                         62   2e-08
SSD185 (SSD185Q) /CSM/SS/SSD1-D/SSD185Q.Seq.d/                         62   2e-08
VHM435 (VHM435Q) /CSM/VH/VHM4-B/VHM435Q.Seq.d/                         56   1e-06
CHN237 (CHN237Q) /CSM/CH/CHN2-B/CHN237Q.Seq.d/                         56   1e-06
SHC204 (SHC204Q) /CSM/SH/SHC2-A/SHC204Q.Seq.d/                         50   9e-05
CHL276 (CHL276Q) /CSM/CH/CHL2-D/CHL276Q.Seq.d/                         50   9e-05
CHG664 (CHG664Q) /CSM/CH/CHG6-C/CHG664Q.Seq.d/                         50   9e-05
AFJ808 (AFJ808Q) /CSM/AF/AFJ8-A/AFJ808Q.Seq.d/                         48   4e-04


Homology FC-BT04 vs DNA

<more DNA info> 
Sequences producing significant alignments:                  (bits) Value  N


(AU285008) Dictyostelium discoideum gamete cDNA clone:FC-BT0...  1310   0.0    1
(AU285002) Dictyostelium discoideum gamete cDNA clone:FC-BS2...  1201   0.0    1
(AU285009) Dictyostelium discoideum gamete cDNA clone:FC-BT0...  1183   0.0    1
(AU285003) Dictyostelium discoideum gamete cDNA clone:FC-BS2...  1096   0.0    2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    46   2e-13  20
(BJ440639) Dictyostelium discoideum cDNA clone:ddv44f07, 3' ...    40   5e-13  5
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    56   6e-11  14
(AF466305) Dictyostelium discoideum ABC transporter AbcB2 (a...    42   1e-10  7
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572...    60   2e-08  13
(AU072014) Dictyostelium discoideum slug cDNA, clone SSD185.       62   4e-08  2


Homology FC-BT04 vs Protein

<more Protein info> 
Sequences producing significant alignments:                      (bits) Value


AC116984_63(AC116984|pid:none) Dictyostelium discoideum chromoso...   221   7e-56
AC116984_70(AC116984|pid:none) Dictyostelium discoideum chromoso...   215   4e-54
AC116984_67(AC116984|pid:none) Dictyostelium discoideum chromoso...   213   2e-53
AC116984_134(AC116984|pid:none) Dictyostelium discoideum chromos...   208   7e-52
AC115680_4(AC115680|pid:none) Dictyostelium discoideum chromosom...   201   8e-50
AC115612_9(AC115612|pid:none) Dictyostelium discoideum chromosom...   189   4e-46
AC116100_9(AC116100|pid:none) Dictyostelium discoideum chromosom...   182   3e-44
AC117075_93(AC117075|pid:none) Dictyostelium discoideum chromoso...   174   1e-41
AC116957_18(AC116957|pid:none) Dictyostelium discoideum chromoso...   170   2e-40
AC117072_39(AC117072|pid:none) Dictyostelium discoideum chromoso...   149   5e-34


Homology FC-BT04 vs Genome

<more Genome info> 





<List of Series> <Series: FC-BT> <Clone: FC-BT04> <SEQ> <Translated> <CSM> <DNA> <Protein> <Genome> <PSORT> <MOTIF>





Dictyostelium discoideum cDNA Project Home