Homology FC-BS17 vs Protein
Query= FC-BS17 (FC-BS17Q) /CSM/FC/FC-BS/FC-BS17Q.Seq.d/
(735 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54ZW5) RecName: Full=40S ribosomal protein S3a; 403 e-111
AC116977_69(AC116977|pid:none) Dictyostelium discoideum chromoso... 402 e-111
EU683898_1(EU683898|pid:none) Chironomus riparius ribosomal prot... 223 1e-56
(A7S3J7) RecName: Full=40S ribosomal protein S3a; 220 6e-56
DQ252485_1(DQ252485|pid:none) Solanum tuberosum clone 048H05 cyc... 217 5e-55
DQ268849_1(DQ268849|pid:none) Solanum tuberosum clone 155F06 cyc... 217 5e-55
DQ241862_1(DQ241862|pid:none) Solanum tuberosum clone 027B03 40S... 215 2e-54
(B3S6Y0) RecName: Full=40S ribosomal protein S3a; 215 2e-54
AY603568_1(AY603568|pid:none) Culicoides sonorensis clone CsRPS3... 214 3e-54
(P49395) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 214 4e-54
DQ252490_1(DQ252490|pid:none) Solanum tuberosum clone 059D09 cyc... 214 4e-54
(P49397) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 214 4e-54
(Q9MBB3) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 213 6e-54
(Q4KTD9) RecName: Full=40S ribosomal protein S3a; &AY857460_1(A... 213 8e-54
EU124994_1(EU124994|pid:none) Eurythoe complanata ribosomal prot... 212 1e-53
(A5B4K1) RecName: Full=40S ribosomal protein S3a-1; &AM446364_1... 212 2e-53
EF082968_1(EF082968|pid:none) Picea sitchensis clone WS02910_B19... 211 3e-53
AP004001_29(AP004001|pid:none) Oryza sativa Japonica Group genom... 211 4e-53
AP008218_722(AP008218|pid:none) Oryza sativa (japonica cultivar-... 210 5e-53
EF065683_1(EF065683|pid:none) Cymbidium hybrid cultivar RPS3 mRN... 209 9e-53
(B0CY45) RecName: Full=40S ribosomal protein S1; 209 1e-52
(A8NX92) RecName: Full=40S ribosomal protein S1; 209 1e-52
CS559986_1(CS559986|pid:none) Sequence 573 from Patent WO2006032... 209 1e-52
BT065729_1(BT065729|pid:none) Zea mays full-length cDNA clone ZM... 209 1e-52
(Q1HRR3) RecName: Full=40S ribosomal protein S3a; &DQ440031_1(D... 208 2e-52
(Q5G5C4) RecName: Full=40S ribosomal protein S3a; &AY850276_1(A... 208 2e-52
CS559752_1(CS559752|pid:none) Sequence 339 from Patent WO2006032... 208 3e-52
(B0WN96) RecName: Full=40S ribosomal protein S3a; 208 3e-52
EU139170_1(EU139170|pid:none) Flustra foliacea putative 40S ribo... 207 3e-52
BC066926_1(BC066926|pid:none) Homo sapiens ribosomal protein S3A... 207 3e-52
L13802_1(L13802|pid:none) Homo sapiens (clone 03) liver expessed... 207 3e-52
AB171328_1(AB171328|pid:none) Macaca fascicularis brain cDNA clo... 207 3e-52
(P61247) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 207 3e-52
(P61246) RecName: Full=40S ribosomal protein S3a; Flags: Fragmen... 207 3e-52
CS559904_1(CS559904|pid:none) Sequence 491 from Patent WO2006032... 207 4e-52
JC5250(JC5250;PC4306;A41974;S45052)ribosomal protein S3a, cytoso... 207 4e-52
(Q6DV02) RecName: Full=40S ribosomal protein S3a; 207 4e-52
CS560132_1(CS560132|pid:none) Sequence 719 from Patent WO2006032... 207 4e-52
CS559646_1(CS559646|pid:none) Sequence 233 from Patent WO2006032... 207 4e-52
(P97351) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 207 4e-52
BT034241_1(BT034241|pid:none) Zea mays full-length cDNA clone ZM... 207 4e-52
BT053090_1(BT053090|pid:none) Medicago truncatula clone MTYFL_FM... 207 6e-52
(A7L6A0) RecName: Full=40S ribosomal protein S3a; &EF675773_1(E... 206 7e-52
(Q4T8S6) RecName: Full=40S ribosomal protein S3a; 206 7e-52
EZ114811_1(EZ114811|pid:none) TSA: Ochlerotatus triseriatus OT-1... 206 7e-52
CS559766_1(CS559766|pid:none) Sequence 353 from Patent WO2006032... 206 1e-51
EF147866_1(EF147866|pid:none) Populus trichocarpa clone WS0125_I... 206 1e-51
(Q6EV04) RecName: Full=40S ribosomal protein S3a; &AJ783867_1(A... 206 1e-51
EU961149_1(EU961149|pid:none) Zea mays clone 232905 40S ribosoma... 206 1e-51
(Q42262) RecName: Full=40S ribosomal protein S3a-2; &AJ001342_1... 206 1e-51
(Q4R4Z6) RecName: Full=40S ribosomal protein S3a; &AB169748_1(A... 206 1e-51
AK003158_1(AK003158|pid:none) Mus musculus 18-day embryo whole b... 206 1e-51
GU589367_1(GU589367|pid:none) Ictalurus punctatus clone CBCZ5309... 206 1e-51
AF052503_1(AF052503|pid:none) Oryza sativa S-phase-specific ribo... 206 1e-51
HH969481_1(HH969481|pid:none) Sequence 291 from Patent EP1641930. 205 2e-51
(A8HS48) RecName: Full=40S ribosomal protein S3a; 205 2e-51
AF402811_1(AF402811|pid:none) Ictalurus punctatus 40S ribosomal ... 205 2e-51
BT097342_1(BT097342|pid:none) Soybean clone JCVI-FLGm-21L16 unkn... 205 2e-51
(B5DGL6) RecName: Full=40S ribosomal protein S3a; &BT043775_1(B... 205 2e-51
EF145218_1(EF145218|pid:none) Populus trichocarpa clone WS01121_... 204 3e-51
(Q6PBY1) RecName: Full=40S ribosomal protein S3a; &AY648734_1(A... 204 3e-51
CS559810_1(CS559810|pid:none) Sequence 397 from Patent WO2006032... 204 3e-51
BT083120_1(BT083120|pid:none) Anoplopoma fimbria clone afim-evh-... 204 3e-51
(O73813) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 204 3e-51
(Q642T2) RecName: Full=40S ribosomal protein S3a; &BC080969_1(B... 204 4e-51
DQ886750_1(DQ886750|pid:none) Argas monolakensis 40S ribosomal p... 204 4e-51
HH969694_1(HH969694|pid:none) Sequence 504 from Patent EP1641930. 204 4e-51
(B5FZS9) RecName: Full=40S ribosomal protein S3a; &DQ214670_1(D... 204 4e-51
FQ857208_7(FQ857208|pid:none) Piriformospora indica PIRI_contig_... 204 4e-51
AY550961_1(AY550961|pid:none) Sparus aurata V-Fos transformation... 204 5e-51
(Q801S3) RecName: Full=40S ribosomal protein S3a-A; &BC047260_1... 203 6e-51
HQ844972_1(HQ844972|pid:none) Fenneropenaeus merguiensis ribosom... 203 6e-51
D01058_1(D01058|pid:none) Catharanthus roseus cyc07 mRNA, comple... 203 6e-51
(P33444) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 203 6e-51
EU247153_1(EU247153|pid:none) Lycosa singoriensis clone LSsin618... 203 6e-51
(Q98TX2) RecName: Full=40S ribosomal protein S3a; &AF321768_1(A... 203 8e-51
D26058_1(D26058|pid:none) Catharanthus roseus cyc07 gene, comple... 202 1e-50
EF444539_1(EF444539|pid:none) Pteromalus puparum ribosomal prote... 202 1e-50
(A6YPJ8) RecName: Full=40S ribosomal protein S3a; &EF639009_1(E... 202 1e-50
AM048925_1(AM048925|pid:none) Timarcha balearica mRNA for riboso... 202 1e-50
JP593133_1(JP593133|pid:none) TSA: Triatoma rubida Triru-107 mRN... 202 1e-50
HP429362_1(HP429362|pid:none) TSA: Triatoma matogrossensis Tm-94... 202 1e-50
HP429361_1(HP429361|pid:none) TSA: Triatoma matogrossensis Tm-94... 202 1e-50
(P49198) RecName: Full=40S ribosomal protein S3a; &L31645_1(L31... 202 1e-50
(B8PIG4) RecName: Full=40S ribosomal protein S1; 202 1e-50
CS559692_1(CS559692|pid:none) Sequence 279 from Patent WO2006032... 202 1e-50
HH969564_1(HH969564|pid:none) Sequence 374 from Patent EP1641930. 202 1e-50
(A8E604) RecName: Full=40S ribosomal protein S3a-B; &BC153786_1... 202 2e-50
FJ268645_1(FJ268645|pid:none) Sus scrofa ribosomal protein S3A m... 202 2e-50
(O43999) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 201 2e-50
(P0CQ58) RecName: Full=40S ribosomal protein S1; &(P0CQ59) RecN... 201 2e-50
HH969516_1(HH969516|pid:none) Sequence 326 from Patent EP1641930. 200 5e-50
(Q4PM31) RecName: Full=40S ribosomal protein S3a; &DQ066297_1(D... 200 5e-50
(Q9CAV0) RecName: Full=40S ribosomal protein S3a-1; &AC009465_2... 200 5e-50
AY849388_1(AY849388|pid:none) Vitis vinifera cultivar Riesling c... 200 5e-50
CS559714_1(CS559714|pid:none) Sequence 301 from Patent WO2006032... 200 5e-50
JO844904_1(JO844904|pid:none) TSA: Amblyomma maculatum Am-10635 ... 200 7e-50
BT093927_1(BT093927|pid:none) Soybean clone JCVI-FLGm-17N24 unkn... 200 7e-50
(P49396) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 199 2e-49
(Q56FG9) RecName: Full=40S ribosomal protein S3a; &AY961531_1(A... 198 3e-49
(P52813) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 197 3e-49
BT092794_1(BT092794|pid:none) Soybean clone JCVI-FLGm-11D2 unkno... 197 3e-49
(B6DDU1) RecName: Full=40S ribosomal protein S3a; &EU934301_1(E... 197 4e-49
AM048964_1(AM048964|pid:none) Georissus sp. APV-2005 mRNA for ri... 196 1e-48
AK365720_1(AK365720|pid:none) Hordeum vulgare subsp. vulgare mRN... 196 1e-48
AY752836_1(AY752836|pid:none) Culicoides sonorensis clone CsRPS3... 195 2e-48
GQ229194_1(GQ229194|pid:none) Actias selene s3a protein mRNA, co... 195 2e-48
(A9USH8) RecName: Full=40S ribosomal protein S3a; 195 2e-48
GQ452008_1(GQ452008|pid:none) Heliconius melpomene ribosomal pro... 195 2e-48
(A8QD49) RecName: Full=40S ribosomal protein S1; 194 5e-48
FP929138_913(FP929138|pid:none) Leptosphaeria maculans JN3 lm_Su... 194 5e-48
(A5JSW9) RecName: Full=40S ribosomal protein S3a; &EF565369_1(E... 193 6e-48
GU084308_1(GU084308|pid:none) Manduca sexta ribosomal protein S3... 193 6e-48
JF811439_1(JF811439|pid:none) Biston betularia 40S ribosomal pro... 193 8e-48
AF542188_1(AF542188|pid:none) Triticum aestivum cyc07 mRNA, comp... 192 1e-47
(B6HFE0) RecName: Full=40S ribosomal protein S1; &AM920435_44(A... 192 1e-47
(A1CZL7) RecName: Full=40S ribosomal protein S1; &(B0Y356) RecN... 192 1e-47
(P48154) RecName: Full=40S ribosomal protein S3a; &S43584(S4358... 192 1e-47
(Q64FN2) RecName: Full=40S ribosomal protein S3a; &AY705974_1(A... 192 2e-47
AK365175_1(AK365175|pid:none) Hordeum vulgare subsp. vulgare mRN... 192 2e-47
FJ599971_1(FJ599971|pid:none) Pfiesteria piscicida clone Ppi+Rho... 192 2e-47
CP001330_369(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 191 2e-47
(C5GS07) RecName: Full=40S ribosomal protein S1; &(C5JZ38) RecN... 191 3e-47
(B8NSD4) RecName: Full=40S ribosomal protein S1; &(Q2UTI8) RecN... 191 3e-47
(Q4P4C2) RecName: Full=40S ribosomal protein S1; &FQ311436_156(... 191 4e-47
(C6HGN3) RecName: Full=40S ribosomal protein S1; 191 4e-47
(C7YTD6) RecName: Full=40S ribosomal protein S1; 191 4e-47
CP003003_590(CP003003|pid:none) Myceliophthora thermophila ATCC ... 190 5e-47
(Q5AS60) RecName: Full=40S ribosomal protein S1; 190 5e-47
(B4MEW8) RecName: Full=40S ribosomal protein S3a; 190 7e-47
(Q871N9) RecName: Full=40S ribosomal protein S1; AltName: Full=C... 189 1e-46
BT083412_1(BT083412|pid:none) Drosophila melanogaster LD08549 fu... 189 1e-46
(B3P9W1) RecName: Full=40S ribosomal protein S3a; &(P55830) Rec... 189 1e-46
(B4JZQ9) RecName: Full=40S ribosomal protein S3a; 189 2e-46
FR824084_20(FR824084|pid:none) Albugo laibachii Nc14, genomic co... 189 2e-46
CP003009_629(CP003009|pid:none) Thielavia terrestris NRRL 8126 c... 188 2e-46
(A4R1I7) RecName: Full=40S ribosomal protein S1; 188 2e-46
(B4NHI4) RecName: Full=40S ribosomal protein S3a; 187 5e-46
(B2CAZ2) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 187 6e-46
(A7E4H3) RecName: Full=40S ribosomal protein S1; 187 6e-46
(A3LX67) RecName: Full=40S ribosomal protein S1-B; &CP000500_19... 186 8e-46
(B9W790) RecName: Full=40S ribosomal protein S1; &(P0CC07) RecN... 186 8e-46
EF634853_1(EF634853|pid:none) Koerneria sp. RS1982 small subunit... 186 1e-45
(O94438) RecName: Full=40S ribosomal protein S1-B; AltName: Full... 185 2e-45
EF634852_1(EF634852|pid:none) Pristionchus sp. 15 RS5229 small s... 185 2e-45
EF634838_1(EF634838|pid:none) Pristionchus entomophagus small su... 185 2e-45
EF634835_1(EF634835|pid:none) Pristionchus pacificus small subun... 184 3e-45
HE605203_1029(HE605203|pid:none) Candida parapsilosis strain CDC... 184 3e-45
EF634845_1(EF634845|pid:none) Pristionchus pauli small subunit r... 184 4e-45
(C4XZU6) RecName: Full=40S ribosomal protein S1-B; 183 7e-45
EF634847_1(EF634847|pid:none) Pristionchus sp. 10 RS5133 small s... 183 9e-45
S49366(S49366) ribosomal protein S0.e.B, cytosolic - yeast (Cand... 182 1e-44
EZ423732_1(EZ423732|pid:none) TSA: Glossina morsitans morsitans ... 182 1e-44
EF634843_1(EF634843|pid:none) Pristionchus sp. 6 RS5101 small su... 182 1e-44
FN984786_1(FN984786|pid:none) Microcosmus squamiger mRNA for sma... 182 2e-44
(A7A1W1) RecName: Full=40S ribosomal protein S1-A; &(B3RHV0) Re... 182 2e-44
(Q9XEG7) RecName: Full=40S ribosomal protein S3a; &AF093109_1(A... 182 2e-44
FN393080_266(FN393080|pid:none) Saccharomyces cerevisiae EC1118 ... 181 3e-44
(A6ZM02) RecName: Full=40S ribosomal protein S1-B; &(B3LLJ2) Re... 181 3e-44
(Q756Y3) RecName: Full=40S ribosomal protein S1; &AE016818_485(... 181 3e-44
GU373028_1(GU373028|pid:none) Amphidinium carterae strain CCMP13... 181 3e-44
EF634836_1(EF634836|pid:none) Pristionchus maupasi small subunit... 181 4e-44
FN315293_1(FN315293|pid:none) Schistosoma japonicum isolate Anhu... 180 6e-44
(Q4MYZ4) RecName: Full=40S ribosomal protein S3a; 180 6e-44
GU130130_1(GU130130|pid:none) Bursaphelenchus xylophilus 40S rib... 180 7e-44
FJ774870_1(FJ774870|pid:none) Scylla paramamosain S3Ae ribosomal... 179 1e-43
(C4R853) RecName: Full=40S ribosomal protein S1; &FN392322_546(... 179 1e-43
(A5DVF8) RecName: Full=40S ribosomal protein S1; 179 1e-43
(B6JWF7) RecName: Full=40S ribosomal protein S1; 178 2e-43
(Q09781) RecName: Full=40S ribosomal protein S1-A; AltName: Full... 178 2e-43
(A3LUW5) RecName: Full=40S ribosomal protein S1-A; &CP000499_73... 178 3e-43
CP002497_147(CP002497|pid:none) Eremothecium cymbalariae DBVPG#7... 177 4e-43
(Q4UB86) RecName: Full=40S ribosomal protein S3a; &CR940352_673... 177 4e-43
(Q6BSE4) RecName: Full=40S ribosomal protein S1-A; &CR382136_40... 177 6e-43
EU124932_1(EU124932|pid:none) Arenicola marina ribosomal protein... 176 1e-42
AK296121_1(AK296121|pid:none) Homo sapiens cDNA FLJ51870 complet... 175 2e-42
EU558333_1(EU558333|pid:none) Phoronis muelleri putative 40S rib... 173 9e-42
(O97313) RecName: Full=40S ribosomal protein S3a; &AL034559_37(... 172 2e-41
(A5K7J8) RecName: Full=40S ribosomal protein S3a; 171 3e-41
AE014135_5(AE014135|pid:none) Drosophila melanogaster chromosome... 170 8e-41
AY232076_1(AY232076|pid:none) Drosophila yakuba clone yak-ad_RpS... 169 1e-40
(Q23DE3) RecName: Full=40S ribosomal protein S3a; 167 6e-40
AY383658_1(AY383658|pid:none) Rattus norvegicus LRRGT00003 mRNA,... 166 1e-39
EF085220_1(EF085220|pid:none) Picea sitchensis clone WS0273_M24 ... 161 3e-38
CP000882_96(CP000882|pid:none) Hemiselmis andersenii chromosome ... 150 6e-35
FJ384979_1(FJ384979|pid:none) Bombina orientalis ribosomal prote... 150 8e-35
AB533220_1(AB533220|pid:none) Taenia taeniaeformis mRNA for Tt6 ... 148 2e-34
AY914942_1(AY914942|pid:none) Schistosoma japonicum SJCHGC01276 ... 148 3e-34
(Q4DZ41) RecName: Full=40S ribosomal protein S3a-2; 147 5e-34
AB099017_1(AB099017|pid:none) Bos taurus mRNA for similar to rib... 145 2e-33
FN357545_8(FN357545|pid:none) Schistosoma mansoni genome sequenc... 145 3e-33
HE575323_324(HE575323|pid:none) Trypanosoma congolense IL3000 an... 144 3e-33
(A4HM77) RecName: Full=40S ribosomal protein S3a; &AM494971_43(... 144 4e-33
(A4IAU0) RecName: Full=40S ribosomal protein S3a-1; &AM502253_4... 143 8e-33
(A4IAU1) RecName: Full=40S ribosomal protein S3a-2; &(Q4FX73) R... 143 8e-33
AM849484_1(AM849484|pid:none) Pomphorhynchus laevis partial mRNA... 135 3e-30
BT055335_1(BT055335|pid:none) Zea mays full-length cDNA clone ZM... 130 9e-29
AE014135_6(AE014135|pid:none) Drosophila melanogaster chromosome... 127 6e-28
AM048963_1(AM048963|pid:none) Eucinetus sp. APV-2005 partial mRN... 120 5e-26
AB098918_1(AB098918|pid:none) Bos taurus mRNA for similar to rib... 117 4e-25
AB098785_1(AB098785|pid:none) Bos taurus mRNA for similar to rib... 117 8e-25
CP002174_74(CP002174|pid:none) Cryptomonas paramecium strain CCA... 116 1e-24
EZ000612_1(EZ000612|pid:none) TSA: Culex tarsalis Ctar-83 40S ri... 114 5e-24
(Q9AW90) RecName: Full=40S ribosomal protein S3a; &AJ010592_18(... 112 2e-23
AX884862_1(AX884862|pid:none) Sequence 725 from Patent EP1033401. 112 2e-23
(C4VBI8) RecName: Full=40S ribosomal protein S1; 107 8e-22
CP001946_20(CP001946|pid:none) Encephalitozoon intestinalis ATCC... 100 7e-20
FP565867_1(FP565867|pid:none) Brachiola algerae, 40S ribosomal p... 99 2e-19
CS560138_1(CS560138|pid:none) Sequence 725 from Patent WO2006032... 91 8e-17
FJ478025_1(FJ478025|pid:none) Rimicaris exoculata ribosomal prot... 90 1e-16
CP003117_1559(CP003117|pid:none) Methanosaeta harundinacea 6Ac, ... 89 2e-16
CP000300_2165(CP000300|pid:none) Methanococcoides burtonii DSM 6... 87 8e-16
(Q8TVD1) RecName: Full=30S ribosomal protein S3Ae; &AE009439_14... 87 1e-15
CP001899_2419(CP001899|pid:none) Ferroglobus placidus DSM 10642,... 85 3e-15
(A3MVE0) RecName: Full=30S ribosomal protein S3Ae; &CP000561_11... 85 4e-15
CP002565_2768(CP002565|pid:none) Methanosaeta concilii GP-6, com... 84 9e-15
(Q46AN4) RecName: Full=30S ribosomal protein S3Ae; &CP000099_20... 83 2e-14
CP001688_2093(CP001688|pid:none) Halomicrobium mukohataei DSM 12... 83 2e-14
CP002100_1937(CP002100|pid:none) Vulcanisaeta distributa DSM 144... 82 4e-14
(Q8Q0F2) RecName: Full=30S ribosomal protein S3Ae; &AE008384_18... 81 6e-14
AK318918_1(AK318918|pid:none) Arabidopsis thaliana AT4G34670 mRN... 80 1e-13
(Q8TKI9) RecName: Full=30S ribosomal protein S3Ae; 79 2e-13
(Q8TZE1) RecName: Full=30S ribosomal protein S3Ae; &AE009950_20... 79 2e-13
CP002737_661(CP002737|pid:none) Methanotorris igneus Kol 5, comp... 79 2e-13
CP002838_1077(CP002838|pid:none) Pyrolobus fumarii 1A, complete ... 79 3e-13
AE010299_3329(AE010299|pid:none) Methanosarcina acetivorans str.... 79 3e-13
(Q8ZT21) RecName: Full=30S ribosomal protein S3Ae; &AE009441_24... 78 4e-13
(Q5V296) RecName: Full=30S ribosomal protein S3Ae; &AY596297_12... 77 9e-13
(O57803) RecName: Full=30S ribosomal protein S3Ae; &A71225(A712... 77 1e-12
CP001787_541(CP001787|pid:none) Methanocaldococcus vulcanius M7,... 76 2e-12
CP002051_1555(CP002051|pid:none) Staphylothermus hellenicus DSM ... 75 3e-12
CP002101_1379(CP002101|pid:none) Methanosalsum zhilinae DSM 4017... 75 3e-12
CP002069_207(CP002069|pid:none) Methanohalobium evestigatum Z-73... 75 3e-12
AJ248283_68(AJ248283|pid:none) Pyrococcus abyssi GE5 complete ge... 75 3e-12
(Q9V2K7) RecName: Full=30S ribosomal protein S3Ae; 75 3e-12
CP001696_1374(CP001696|pid:none) Methanocaldococcus fervens AG86... 74 7e-12
(Q9YCV8) RecName: Full=30S ribosomal protein S3Ae; &BA000002_77... 74 7e-12
D64422(D64422)ribosomal protein S3a - Methanococcus jannaschii 74 1e-11
(P54059) RecName: Full=30S ribosomal protein S3Ae; &L77117_1002... 74 1e-11
(Q4JB17) RecName: Full=30S ribosomal protein S3Ae; &CP000077_58... 73 2e-11
(B7XMD2) RecName: Full=40S ribosomal protein S1; 72 3e-11
AM114193_868(AM114193|pid:none) Uncultured methanogenic archaeon... 71 5e-11
(C3MQ36) RecName: Full=30S ribosomal protein S3Ae; &(C3MVF4) Re... 71 6e-11
DQ118403_36(DQ118403|pid:none) Uncultured euryarchaeote Alv-FOS1... 70 8e-11
CP000493_413(CP000493|pid:none) Hyperthermus butylicus DSM 5456,... 70 8e-11
CP002792_1300(CP002792|pid:none) Methanothermococcus okinawensis... 70 8e-11
(Q975F8) RecName: Full=30S ribosomal protein S3Ae; &BA000023_50... 70 1e-10
(Q18HQ7) RecName: Full=30S ribosomal protein S3Ae; &AM180088_14... 70 1e-10
(Q5JGM4) RecName: Full=30S ribosomal protein S3Ae; &AP006878_12... 70 1e-10
AP011837_39(AP011837|pid:none) Candidatus Caldiarchaeum subterra... 70 1e-10
CP002372_897(CP002372|pid:none) Thermococcus barophilus MP, comp... 69 2e-10
(C5A552) RecName: Full=30S ribosomal protein S3Ae; &CP001398_86... 69 2e-10
CP000743_747(CP000743|pid:none) Methanococcus aeolicus Nankai-3,... 69 2e-10
CP001939_1326(CP001939|pid:none) Thermosphaera aggregans DSM 114... 69 2e-10
(A6USE4) RecName: Full=30S ribosomal protein S3Ae; &CP000742_15... 69 3e-10
(C6A3X6) RecName: Full=30S ribosomal protein S3Ae; &CP001463_12... 68 4e-10
CP002098_1054(CP002098|pid:none) Ignisphaera aggregans DSM 17230... 68 5e-10
AY550075_1(AY550075|pid:none) Sus scrofa 40S ribosomal protein S... 67 7e-10
CP000852_1724(CP000852|pid:none) Caldivirga maquilingensis IC-16... 67 9e-10
CP002278_131(CP002278|pid:none) Methanothermus fervidus DSM 2088... 67 9e-10
CP002920_508(CP002920|pid:none) Thermococcus sp. 4557, complete ... 66 2e-09
CP001860_1385(CP001860|pid:none) Haloterrigena turkmenica DSM 55... 66 2e-09
CP001932_2366(CP001932|pid:none) Natrialba magadii ATCC 43099, c... 66 2e-09
CP002656_1980(CP002656|pid:none) Metallosphaera cuprina Ar-4, co... 65 3e-09
EF089401_14(EF089401|pid:none) Uncultured marine bacterium HF10_... 65 3e-09
(A9A7B4) RecName: Full=30S ribosomal protein S3Ae; &CP000867_21... 65 3e-09
(B8GFN8) RecName: Full=30S ribosomal protein S3Ae; &CP001338_25... 65 3e-09
CP001690_2047(CP001690|pid:none) Halogeometricum borinquense DSM... 65 5e-09
CP002839_2141(CP002839|pid:none) Halopiger xanaduensis SH-6, com... 65 5e-09
CP002057_909(CP002057|pid:none) Methanococcus voltae A3, complet... 65 5e-09
CP001710_176(CP001710|pid:none) Methanothermobacter marburgensis... 64 6e-09
CP002913_572(CP002913|pid:none) Methanococcus maripaludis X1, co... 64 1e-08
CP000866_1508(CP000866|pid:none) Nitrosopumilus maritimus SCM1, ... 63 1e-08
CP002009_1363(CP002009|pid:none) Methanocaldococcus infernus ME,... 63 1e-08
CP001719_460(CP001719|pid:none) Methanobrevibacter ruminantium M... 62 3e-08
(A5UKY8) RecName: Full=30S ribosomal protein S3Ae; &CP000678_66... 62 3e-08
CP002988_318(CP002988|pid:none) Halophilic archaeon DL31, comple... 62 4e-08
(A8AAU3) RecName: Full=30S ribosomal protein S3Ae; &CP000816_86... 61 5e-08
EF558552_7(EF558552|pid:none) Halorubrum sp. TP009 clone 4 seque... 60 9e-08
(B9LTT6) RecName: Full=30S ribosomal protein S3Ae; &CP001365_61... 60 9e-08
(A7IAJ1) RecName: Full=30S ribosomal protein S3Ae; &CP000780_22... 59 2e-07
(Q2FS35) RecName: Full=30S ribosomal protein S3Ae; &CP000254_24... 58 6e-07
(A3CSL0) RecName: Full=30S ribosomal protein S3Ae; &CP000562_42... 58 6e-07
EU016635_21(EU016635|pid:none) Uncultured Group I marine crenarc... 57 1e-06
HM229999_1(HM229999|pid:none) Candidatus Nitrososphaera gargensi... 53 1e-05
CP000968_1366(CP000968|pid:none) Candidatus Korarchaeum cryptofi... 53 1e-05
EU016664_12(EU016664|pid:none) Uncultured marine microorganism H... 51 5e-05
DQ158857_52(DQ158857|pid:none) Bigelowiella natans nucleomorph c... 50 9e-05
EF576486_1(EF576486|pid:none) Oryza sativa (indica cultivar-grou... 50 2e-04
(A2SQ57) RecName: Full=30S ribosomal protein S3Ae; &CP000559_28... 49 2e-04
S62679(S62679)ribosomal protein S3a, cytosolic - Emericella nidu... 49 2e-04
CR860858_1(CR860858|pid:none) Pongo abelii mRNA; cDNA DKFZp469E1... 47 0.001
AK220818_1(AK220818|pid:none) Arabidopsis thaliana mRNA for 40S ... 46 0.002
DQ675535_1(DQ675535|pid:none) Diaphorina citri clone WHDc0001 ri... 46 0.002
AB098832_1(AB098832|pid:none) Bos taurus mRNA for similar to rib... 46 0.002
AY909417_1(AY909417|pid:none) Siniperca chuatsi clone C175 40S r... 45 0.003
AF117889_1(AF117889|pid:none) Avena fatua 40S ribosomal protein ... 45 0.005
Z18417_1(Z18417|pid:none) Arabidopsis thaliana transcribed seque... 43 0.018
GU131153_1(GU131153|pid:none) Plutella xylostella ribosomal prot... 42 0.031
GU942967_1(GU942967|pid:none) Uncultured archaeon MedDCM-OCT-S05... 39 0.20
CP002638_3104(CP002638|pid:none) Verrucosispora maris AB-18-032,... 32 0.31
EU963400_1(EU963400|pid:none) Zea mays clone 261912 unknown mRNA. 36 1.7
AB027994_1(AB027994|pid:none) Schizosaccharomyces pombe gene for... 36 1.7
CP001708_825(CP001708|pid:none) Anaerococcus prevotii DSM 20548,... 35 5.0
AF097331_1(AF097331|pid:none) Trypanosoma brucei rhodesiense lyt... 34 6.5
CP001134_30(CP001134|pid:none) Vibrio fischeri MJ11 plasmid pMJ1... 34 6.5
CP003117_501(CP003117|pid:none) Methanosaeta harundinacea 6Ac, c... 34 6.5
CP001841_302(CP001841|pid:none) Treponema azotonutricium ZAS-9, ... 34 6.5
>(Q54ZW5) RecName: Full=40S ribosomal protein S3a;
Length = 273
Score = 403 bits (1036), Expect = e-111
Identities = 208/208 (100%), Positives = 208/208 (100%)
Frame = +3
Query: 12 NRTQGTKLASDGLKGRVYEVSLADMKDDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSD 191
NRTQGTKLASDGLKGRVYEVSLADMKDDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSD
Sbjct: 48 NRTQGTKLASDGLKGRVYEVSLADMKDDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSD 107
Query: 192 KLRSLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKM 371
KLRSLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKM
Sbjct: 108 KLRSLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKM 167
Query: 372 VDILTETVSSNDLKTVVDYLIGVSLNGVTTNASGFAPTLAEKIRIEGSSIFPIHNVFIRK 551
VDILTETVSSNDLKTVVDYLIGVSLNGVTTNASGFAPTLAEKIRIEGSSIFPIHNVFIRK
Sbjct: 168 VDILTETVSSNDLKTVVDYLIGVSLNGVTTNASGFAPTLAEKIRIEGSSIFPIHNVFIRK 227
Query: 552 VKVLKTPKVDAAKLSELYASSATSTIAP 635
VKVLKTPKVDAAKLSELYASSATSTIAP
Sbjct: 228 VKVLKTPKVDAAKLSELYASSATSTIAP 255
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,613,266,202
Number of extensions: 30046273
Number of successful extensions: 68351
Number of sequences better than 10.0: 308
Number of HSP's gapped: 67974
Number of HSP's successfully gapped: 309
Length of query: 245
Length of database: 1,732,582,204
Length adjustment: 128
Effective length of query: 117
Effective length of database: 1,047,882,940
Effective search space: 122602303980
Effective search space used: 122602303980
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
Dictyostelium discoideum cDNA Project Home