Dictyostelium discoideum cDNA Clone FC-BQ22

Size:		591
3' sequence:	KS980424
5' sequence:	-
Whole insert?:	Y
Accession #:	-
Remarks:	*

Sequence FC-BQ22

ATTTTAAGAA AATGCCTCAC TCATTCGGTC TCCGTGCTCG TACCAGATAC
TTGTTCTCTC GTGGTTTCAG AAACCATGGT CTCTTACAAA CCACCACCTT
CTTAAGAACT TTCCGTTTAG GTGATTACGT TGATATCAAA GCCACCGGTA
ATGTACACAA AGGTATGCCA CACAAATTCT ACCACGGTCG TACCGGTCGT
GTTTGGAATG TTACTCCACG TGCTGTTGGT GTCATCATCA ACAAACGTGT
TGGTCCAAGA ATCATTGCCA AGAAAATCCA CGTCAGAACT GAACACGTCA
AACCATCAAA CTCCATGGCT GCTCACTTAA AACGTATCCA AGAAAACAAA
AAAGCTGTCG TTGAAGCCAA GAAAGCCGGT AAATGGGTCG ATGTTAGACG
TAACCCAGCT GCACCAACGG ACGGTTTCTT TGTCAACCCA AGAAACACTG
AATTCGTTGA AGTCAAACCA GTCAAATACG AACTTTTATT ATAAATTAAT
TTAAAAGAGT GGTGGCTAAT ATGGTTCAAT CGAAATCCTT TGATTATCCA
AATTTGTCTT ATTTAAAAAA GAAAAATAAA AAAAAATATA A

Translated Amino Acid Sequence FC-BQ22

FKKMPHSFGLRARTRYLFSRGFRNHGLLQTTTFLRTFRLGDYVDIKATGNVHKGMPHKFY
HGRTGRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPSNSMAAHLKRIQENKKAVV
EAKKAGKWVDVRRNPAAPTDGFFVNPRNTEFVEVKPVKYELLL*inlkewwliwfnrnpl
iiqicli*krkikkni

Homology FC-BQ22 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FC-BQ22 (FC-BQ22Q) /CSM/FC/FC-BQ/FC-BQ22Q.Seq.d/                     1118   0.0
VHK774 (VHK774Q) /CSM/VH/VHK7-D/VHK774Q.Seq.d/                       1102   0.0
VHH523 (VHH523Q) /CSM/VH/VHH5-A/VHH523Q.Seq.d/                       1102   0.0
VFL168 (VFL168Q) /CSM/VF/VFL1-C/VFL168Q.Seq.d/                       1102   0.0
VFJ214 (VFJ214Q) /CSM/VF/VFJ2-A/VFJ214Q.Seq.d/                       1102   0.0
FC-193 (FC-193Q) /CSM/CG/CG-FC/FC-193Q.Seq.d/                        1102   0.0
VSF754 (VSF754Q) /CSM/VS/VSF7-C/VSF754Q.Seq.d/                       1090   0.0
VSB776 (VSB776Q) /CSM/VS/VSB7-D/VSB776Q.Seq.d/                       1090   0.0
VSI403 (VSI403Q) /CSM/VS/VSI4-A/VSI403Q.Seq.d/                       1088   0.0
VSB311 (VSB311Q) /CSM/VS/VSB3-A/VSB311Q.Seq.d/                       1086   0.0

Homology FC-BQ22 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


BQ153144|BQ153144.1 NF031B08IR1F1063 Irradiated Medicago tru...    96   6e-16  1
BE203333|BE203333.1 EST403355 KV1 Medicago truncatula cDNA c...    96   6e-16  1
AL370150|AL370150.1 Medicago truncatula EST MtBA36A09F1 : T3...    96   6e-16  1
BE124671|BE124671.1 EST393706 GVN Medicago truncatula cDNA c...    96   6e-16  1
AJ502255|AJ502255.1 Medicago truncatula EST, clone mtgmadc12...    96   6e-16  1
AW573675|AW573675.1 EST316266 GVN Medicago truncatula cDNA c...    96   6e-16  1
BF634630|BF634630.1 NF064C11DT1F1085 Drought Medicago trunca...    96   6e-16  1
AJ498414|AJ498414.1 Medicago truncatula EST, clone mt--acc95...    96   6e-16  1
BQ154523|BQ154523.1 NF073C12IR1F1098 Irradiated Medicago tru...    96   6e-16  1
AJ502274|AJ502274.1 Medicago truncatula EST, clone mtgmadc12...    96   6e-16  1

Homology FC-BQ22 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54X53) RecName: Full=60S ribosomal protein L21;                     266   5e-70
FN357335_1(FN357335|pid:none) Schistosoma mansoni genome sequenc...   153   6e-36
AY813279_1(AY813279|pid:none) Schistosoma japonicum SJCHGC00639 ...   149   9e-35
GN110337_1(GN110337|pid:none) Sequence 15118 from Patent WO20090...   149   1e-34
GN110339_1(GN110339|pid:none) Sequence 15120 from Patent WO20090...   147   3e-34
GN110445_1(GN110445|pid:none) Sequence 15226 from Patent WO20090...   147   4e-34
AF475114_1(AF475114|pid:none) Triticum aestivum 60s ribosomal pr...   146   6e-34
AK354981_1(AK354981|pid:none) Hordeum vulgare subsp. vulgare mRN...   146   6e-34
GN110341_1(GN110341|pid:none) Sequence 15122 from Patent WO20090...   145   1e-33
GN110301_1(GN110301|pid:none) Sequence 15082 from Patent WO20090...   145   1e-33

Homology FC-BQ22 vs Genome