Dictyostelium discoideum cDNA Clone FC-BE23

Size:		2.5K
3' sequence:	KS971003
5' sequence:	KS971009
Whole insert?:	*
Accession #:	*
Remarks:	*

Sequence FC-BE23

AAAAAATGGT AAATAAAAAA TATAGTTCTG GTCAAAATGA AAATGAAAAG
TTAATGGATA GAATTGAAAA ATTAGATTTA AGTGAGTCAA ATATTTTAAA
CAATGATTTT ATTACAAATG AATTAAGATA AGTCTATCCG GAATATAACA
GAAAACCATT AAAAGGATTT AAACAATTGG TTGAAAAAGC AATGAACCAG
ATTATTAAAA ACCTTTCGTC TTGTGAATCA TCAGAGAACG AAGATGGTGA
TAATAAAATG GAAGAATCAG ATGGAGATGA TGTAGAGATA ATTTCACCAC
CACTACCACC ACCATCATCA AATATTTTAA ATGAACAATT AACATCACAA
TACAAACAAA ATATTAAAAA TACACCACCA ACAACAACAA CTACAACACC
AGCAAAAAGA AATAGAGATG AAAATATACC ATCAAATGTA AATAGTAATA
ATAATAATAA TAATAATAAT AATGCAATTA ATAGTAATAC CACAACAAAT
AATGTAAATA CACCAAACTC AAAACCAAAA AAGAAATTAA AGAATAGTTC
AAATGGTAAT AATGTATTCC AATTTTCAAA TAATAATAAT AATAATGGTA
ATAATAAAGA TA-------- --ATTACTCA CAGAAATGGA TGGTTTAGAG
AAACGTTCCG AAGTATTCAT AATTGCTGCA ACCAATAGAC CTGATATTAT
CGATGCTGCA ATGTGTAGAC CAGGTCGTCT TGATAAAATG GTTTATGTTC
CATTACCATC ACCAGAGGAA AGATGTGAAA TCCTTAAAAC TCTCACTCAT
AAGATTCCAA TTCACCAAGA TGTTGATCTA ATTAAAGTTG GTACCGATCT
TCGTTGTCAT TCATTCTCTG GTGCTGATCT TTCATTATTA GTTAAAGAAG
CAGCAAATCA TGCTATTAGT CGTGGTTTCG ATAATAACTC TACTGAACCA
GATACTGTAA CAATGGAAGA TTTCATTTTC GCTCTCTCTA AAATTAAACC
TTCCGTTTCC AGAAAAGATG AATTAATGTA TGATAAATTA AATAATGACA
TTAATAAATC TAGAGATAAA AAACCAAATA ATTCAAATAA TATTCCAATA
ACAAATAATA TCCCAATAAC CAATAATAAT AATAATATGA TAATAAATTA
AATACTCACA AA

Translated Amino Acid Sequence FC-BE23

kmvnkkyssgqneneklmdriekldlsesnilnndfitnelr*VYPEYNRKPLKGFKQLV
EKAMNQIIKNLSSCESSENEDGDNKMEESDGDDVEIISPPLPPPSSNILNEQLTSQYKQN
IKNTPPTTTTTTPAKRNRDENIPSNVNSNNNNNNNNNAINSNTTTNNVNTPNSKPKKKLK
NSSNGNNVFQFSNNNNNNGNNKD---

---LLTEMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTL
THKIPIHQDVDLIKVGTDLRCHSFSGADLSLLVKEAANHAISRGFDNNSTEPDTVTMEDF
IFALSKIKPSVSRKDELMYDKLNNDINKSRDKKPNNSNNIPITNNIPITNNNNNMIIN*i
lt

Homology FC-BE23 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FC-BE23 (FC-BE23Q) /CSM/FC/FC-BE/FC-BE23Q.Seq.d/                      878   0.0
AHM155 (AHM155Q) /CSM/AH/AHM1-C/AHM155Q.Seq.d/                        878   0.0
SHA450 (SHA450Q) /CSM/SH/SHA4-C/SHA450Q.Seq.d/                        638   0.0
VSF565 (VSF565Q) /CSM/VS/VSF5-C/VSF565Q.Seq.d/                         50   8e-05
SSG240 (SSG240Q) /CSM/SS/SSG2-B/SSG240Q.Seq.d/                         50   8e-05
SSG144 (SSG144Q) /CSM/SS/SSG1-B/SSG144Q.Seq.d/                         50   8e-05
SFJ337 (SFJ337Q) /CSM/SF/SFJ3-B/SFJ337Q.Seq.d/                         50   8e-05
SSL658 (SSL658Q) /CSM/SS/SSL6-C/SSL658Q.Seq.d/                         48   3e-04
SSG766 (SSG766Q) /CSM/SS/SSG7-C/SSG766Q.Seq.d/                         46   0.001
VHQ219 (VHQ219Q) /CSM/VH/VHQ2-A/VHQ219Q.Seq.d/                         42   0.019

Homology FC-BE23 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU284613) Dictyostelium discoideum gamete cDNA clone:FC-BE2...   813   0.0    1
(BJ355070) Dictyostelium discoideum cDNA clone:dda55m13, 3' ...   813   0.0    1
(BJ403251) Dictyostelium discoideum cDNA clone:dds24d14, 3' ...   638   e-178  1
(AU284612) Dictyostelium discoideum gamete cDNA clone:FC-BE2...   517   e-153  2
(FD414316) 1106540244104 Cryptosporidium muris (strain RN66)...    44   3e-07  3
(FD402822) 1106514403849 Cryptosporidium muris (strain RN66)...    44   3e-07  3
(FF295654) 279307886 Pea aphid whole body normalized full le...    46   1e-05  2
(EX649641) 256730679 Pea aphid whole body normalized full le...    46   1e-05  2
(EX640977) 256634708 Pea aphid whole body normalized full le...    46   1e-05  2
(FF330917) 280445218 Pea aphid whole body normalized full le...    46   1e-05  2

Homology FC-BE23 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54SY2) RecName: Full=Putative ribosome biogenesis ATPase nvl; ...   301   5e-80
AY493662_1(AY493662|pid:none) Candida albicans AAA ATPase gene, ...   148   5e-34
FM992692_197(FM992692|pid:none) Candida dubliniensis CD36 chromo...   145   4e-33
CP000499_244(CP000499|pid:none) Scheffersomyces stipitis CBS 605...   144   1e-32
HE575324_139(HE575324|pid:none) Trypanosoma congolense IL3000 an...   143   2e-32
CP001324_149(CP001324|pid:none) Micromonas sp. RCC299 chromosome...   142   4e-32
(O14325) RecName: Full=Uncharacterized AAA domain-containing pro...   140   1e-31
BC044980_1(BC044980|pid:none) Xenopus laevis hypothetical protei...   140   2e-31
HE573027_159(HE573027|pid:none) Trypanosoma vivax Y486 annotated...   136   2e-30
FR824128_19(FR824128|pid:none) Albugo laibachii Nc14, genomic co...   136   2e-30

Homology FC-BE23 vs Genome