Dictyostelium discoideum cDNA Clone FC-BC01

Size:		1.8K
3' sequence:	KS970702
5' sequence:	KS970704
Whole insert?:	*
Accession #:	C25776
Remarks:	*

Sequence FC-BC01

GGAAGGAGAT ATAAAATATA AAAGAAGAAA AAAAATGGAT GTTAATCAAA
TTAGAAAAAC TTTTATCGAT TTTTTTAGAG AGAAATATGA ACATACATTT
GTTCCATCAT CAGCAGTAAT TCCACATGAT GATCCAACTT TATTATTTGC
AAATGCAGGT ATGAATCAAT TTAAACCAAT CTTTTTAGGA CAAGTTAATC
CAAAATCAGA ACAAGCAAAA TTGAAGAGAG CAGTCAATAG TCAAAAATGT
ATTCGTGCAG GTGGTAAACA TAATGATTTG GATGATGTAG GTAAGGATAC
TTATCATCAC ACCTTCTTTG AGATGTTGGG TAATTGGTCA TTTGGCAATT
ACTTTAAGAA GGAGGCAATC ACTTGGGCAT GGGAATTATT GACAGAGGTA
TACAAATTAG ATAAAGAACG TTTATATGTC ACTTACTTTA GAGGTGACCC
AGAGAAAGGA TTGGAAGCAG ATCTCGAAGC AAAGAACCTT TGGTTGCAAT
ATTTACCAGA GGAACGTGTG CTCCCATTCG GTATGAAAGA GAACTTTTGG
GAGATGGGTG AC-------- --TTCGTATG AATTTGGTTG AAACTTTGAA
GGAAGTTCAA GCACTCCAAA GAAAACAAGT CAAAGAACAA GAAACCATCT
TGGCTCAACA AGCTCAAACC TATTTAGAGA AAACCTCTGA AGAATTGGCT
AAATCTCAAC CAAAGGTTTT CGTAGATTTA GTAAACTTCA ATTCAAATAC
TCCTTTAATC ACTGAAACCA TTAAAAAAAT TCAAACTAAA TCACCAATGA
CTGCAATCAT GTTAATTAGT CCAGATGAAG AAAAAGGTAA AGTTACTTGC
ATTGGTATCG TTCCAAAAGA TTCTGAAATC TCAAAAACTT TAACTGCAAA
TGCTTGGGTT GTAAAGGTTA CCGAAGTTTT AGGTGGTAAA GGTGGTGGTA
AAGTTGATGT TGCTCAAGGT GTTGGTTCTA AATTAGATAA AATCGATGAA
GCTATTCTCG TTTCAAGAGA ATTTGCAAAT GCAAACTGAT TCAAATTATC
TTTATAAAAA TAAAATAAAA TAAAAAAAAT AATAAAAA

Translated Amino Acid Sequence FC-BC01

EGDIKYKRRKKMDVNQIRKTFIDFFREKYEHTFVPSSAVIPHDDPTLLFANAGMNQFKPI
FLGQVNPKSEQAKLKRAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGNYFKK
EAITWAWELLTEVYKLDKERLYVTYFRGDPEKGLEADLEAKNLWLQYLPEERVLPFGMKE
NFWEMGD---

---RMNLVETLKEVQALQRKQVKEQETILAQQAQTYLEKTSEELAKSQPKVFVDLVNFNS
NTPLITETIKKIQTKSPMTAIMLISPDEEKGKVTCIGIVPKDSEISKTLTANAWVVKVTE
VLGGKGGGKVDVAQGVGSKLDKIDEAILVSREFANAN*fklsl*k*nkikkiik

Homology FC-BC01 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FC-BC01 (FC-BC01Q) /CSM/FC/FC-BC/FC-BC01Q.Seq.d/                     1897   0.0
FC-402 (FC-402Q) /CSM/CG/CG-FC/FC-402Q.Seq.d/                        1025   0.0
VHI681 (VHI681Q) /CSM/VH/VHI6-D/VHI681Q.Seq.d/                       1001   0.0
SHK820 (SHK820Q) /CSM/SH/SHK8-A/SHK820Q.Seq.d/                       1001   0.0
SHA174 (SHA174Q) /CSM/SH/SHA1-D/SHA174Q.Seq.d/                       1001   0.0
AHI582 (AHI582Q) /CSM/AH/AHI5-D/AHI582Q.Seq.d/                       1001   0.0
AHD666 (AHD666Q) /CSM/AH/AHD6-C/AHD666Q.Seq.d/                       1001   0.0
VHD392 (VHD392Q) /CSM/VH/VHD3-D/VHD392Q.Seq.d/                        995   0.0
AHA407 (AHA407Q) /CSM/AH/AHA4-A/AHA407Q.Seq.d/                        995   0.0
SHK406 (SHK406Q) /CSM/SH/SHK4-A/SHK406Q.Seq.d/                        985   0.0

Homology FC-BC01 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AF188717) Dictyostelium discoideum alanyl-tRNA synthetase (...   963   0.0    5
(C25775) Dictyostelium discoideum gamete cDNA, clone FC-BC01.     963   0.0    3
(BJ397108) Dictyostelium discoideum cDNA clone:dds45h06, 5' ...   955   0.0    3
(BJ332266) Dictyostelium discoideum cDNA clone:dda38c18, 5' ...   955   0.0    3
(BJ423300) Dictyostelium discoideum cDNA clone:ddv48a22, 5' ...   955   0.0    3
(BJ335055) Dictyostelium discoideum cDNA clone:dda48c21, 5' ...   955   0.0    3
(BJ391666) Dictyostelium discoideum cDNA clone:dds24c19, 5' ...   955   0.0    3
(BJ330331) Dictyostelium discoideum cDNA clone:dda31n02, 5' ...   955   0.0    2
(BJ419982) Dictyostelium discoideum cDNA clone:ddv37h23, 5' ...   955   0.0    2
(BJ331551) Dictyostelium discoideum cDNA clone:dda35i23, 5' ...   936   0.0    3

Homology FC-BC01 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54Y20) RecName: Full=Alanyl-tRNA synthetase, cytoplasmic;     ...   370   e-101
CP001330_129(CP001330|pid:none) Micromonas sp. RCC299 chromosome...   279   2e-73
CP000497_274(CP000497|pid:none) Scheffersomyces stipitis CBS 605...   277   6e-73
BX842632_19(BX842632|pid:none) Neurospora crassa DNA linkage gro...   276   1e-72
CR954204_497(CR954204|pid:none) Ostreococcus tauri strain OTTH05...   276   1e-72
CP003010_1146(CP003010|pid:none) Thielavia terrestris NRRL 8126 ...   272   3e-71
(P36428) RecName: Full=Alanyl-tRNA synthetase;          EC=6.1.1...   270   8e-71
AM502240_136(AM502240|pid:none) Leishmania infantum chromosome 2...   270   8e-71
AC007980_17(AC007980|pid:none) Arabidopsis thaliana chromosome I...   270   8e-71
(Q5A8K2) RecName: Full=Alanyl-tRNA synthetase;          EC=6.1.1...   270   1e-70

Homology FC-BC01 vs Genome