Homology FC-BA11 vs Protein

Query= FC-BA11 (FC-BA11Q) /CSM/FC/FC-BA/FC-BA11Q.Seq.d/
         (1068 letters)

Database: nrp_B
           5,349,213 sequences; 1,732,582,204 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM920689_339(AM920689|pid:none) Xanthomonas campestris pv. campe...    81   1e-13
CP002789_4122(CP002789|pid:none) Xanthomonas campestris pv. raph...    79   4e-13
CP000050_316(CP000050|pid:none) Xanthomonas campestris pv. campe...    79   4e-13
AE008922_313(AE008922|pid:none) Xanthomonas campestris pv. campe...    79   4e-13
AM039952_339(AM039952|pid:none) Xanthomonas campestris pv. vesic...    78   1e-12
CP000937_1732(CP000937|pid:none) Francisella philomiragia subsp....    37   2.5
CP002557_900(CP002557|pid:none) Francisella cf. novicida Fx1, co...    35   5.5
AJ567914_1(AJ567914|pid:none) Mucor circinelloides partial mRNA ...    35   9.4
CP000099_2071(CP000099|pid:none) Methanosarcina barkeri str. Fus...    35   9.4

>AM920689_339(AM920689|pid:none) Xanthomonas campestris pv.
           campestris complete genome, strain B100.
          Length = 651

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 47/106 (44%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
 Frame = +2

Query: 620 GFSANDDLTVDGAPLWLKSIPADKRALV-YYTTTQYSTGSLIN-YCNLASNAVLEWPNDG 793
           G  +N DLT DGA  WL  IPAD RA V YYTT+   T    N YCN AS+ VL  P DG
Sbjct: 544 GCGSNTDLTYDGAKAWLAGIPADARAKVNYYTTSFAKTNWYTNDYCNAASDLVLNDPEDG 603

Query: 794 VVDNEHTPLEGGVYLNNFKDWFHSDGMHSPQQTTNTEYNKEMSSNS 931
            V+  +  L GGV   N     H+ GM  P Q  +   N  M++N+
Sbjct: 604 TVEQANAQLPGGVNRGNTTGQCHTTGMRDPAQYLDASRNAVMNANA 649

 Score = 52.4 bits (124), Expect = 4e-05
 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
 Frame = +1

Query: 232 PDGSKETIPMFXXXXXXXXXXXXXXFGGYINVSELGNYDLQVVYKG-SQNGNGVIRSNQH 408
           P G+  T  M               +GG    +  G +  QV+  G  Q G   +R+++H
Sbjct: 216 PQGTARTFAMADDGKHDDGAAGDGVYGGSFQPTSAGTWIAQVIVHGRDQAGQPFVRTSEH 275

Query: 409 LIPITSQYLELTGEVQSVQDGDAN-LNIYFIVNSPNQTTVDQTPVHVYSEVYGTDDDGKK 585
           ++P+    + L G   S +  D   L+I   + +  Q     T   V+ +V+GTD  GK+
Sbjct: 276 VLPVLDTSVRLLGNALSARAADGTRLSIGLPIAARGQAP---THYRVFGQVWGTDAKGKQ 332

Query: 586 VAIAWV 603
           + +AW+
Sbjct: 333 IPVAWI 338

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 2,379,672,564
Number of extensions: 41876613
Number of successful extensions: 103035
Number of sequences better than 10.0: 9
Number of HSP's gapped: 102898
Number of HSP's successfully gapped: 14
Length of query: 356
Length of database: 1,732,582,204
Length adjustment: 133
Effective length of query: 223
Effective length of database: 1,021,136,875
Effective search space: 227713523125
Effective search space used: 227713523125
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)