Dictyostelium discoideum cDNA Clone FC-BA11

Size:		1.5‚j
3' sequence:	KS970621
5' sequence:	KS970630
Whole insert?:	*
Accession #:	-
Remarks:	*

Sequence FC-BA11

GAAGATTCAA CACCTCAATT GTTAATGTTG GTTCAAAATC CAAGTGATAC
TCATATCTAC TCTTATGTAT CATCATACAT TAATTTATTC ACAGGTCAAA
AAGTATCAGT TTTAGCAATG CTCCACAAGA TGTCAGAATT CATTAAAAAG
TCTTCTGCCA ATCGTCCACT CAATTGGAAA CCATCACCAA TTTTATTATC
AGATGTTTCA GCAGAGATGA TTTTAGGTTT ACCAGATGGT TCAAAAGAAA
CTATCCCAAT GTTTGATGAT GGTCTTCATG ATGATGATCA TGCAAATGAT
GGTCTTTTCG GTGGTTATAT TAATGTAAGT GAATTGGGTA ATTATGACCT
TCAAGTAGTT TACAAAGGTT CTCAAAATGG TAATGGTGTA ATTCGTTCAA
ATCAACATCT CATTCCAATA ACTTCTCAAT ATTTAGAATT AACTGGTGAA
GTTCAATCAG TTCAAGATGG TGATGCAAAT TTAAATATCT ATTTCATTGT
CAATAGTCCA AACCAAACCA CTGTTGATCA AACACCAGTA CATGTTTATT
CAGAAGTTTA TGGTACTGAT GATGATGGTA AAAAAGTTGC AATTGCTTGG
GTTGC----- -----TTTTG GTTTTTCTGC AAATGATGAT CTCACTGTTG
ATGGTGCCCC TTTATGGTTA AAATCAATTC CAGCAGATAA AAGAGCTTTA
GTTTATTATA CAACTACTCA ATATAGTACT GGTTCTTTAA TTAATTATTG
TAATTTGGCT TCCAATGCAG TCTTAGAATG GCCAAATGAT GGTGTTGTTG
ATAATGAGCA TACTCCACTC GAAGGTGGTG TATATTTAAA TAACTTTAAA
GACTGGTTTC ACTCTGATGG TATGCACTCA CCACAACAAA CTACAAATAC
TGAATATAAC AAAGAAATGA GTTCCAACTC TTTTTGGTAA ACTACTTTGT
ATTATTTTTT TTTCTCTACA ATAATTTTAA TAAAATCGAT TTATATTAAA
TTTATTTTCA CTTTAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA
AAAAAAAAAA AAAAAAAA

Translated Amino Acid Sequence FC-BA11

EDSTPQLLMLVQNPSDTHIYSYVSSYINLFTGQKVSVLAMLHKMSEFIKKSSANRPLNWK
PSPILLSDVSAEMILGLPDGSKETIPMFDDGLHDDDHANDGLFGGYINVSELGNYDLQVV
YKGSQNGNGVIRSNQHLIPITSQYLELTGEVQSVQDGDANLNIYFIVNSPNQTTVDQTPV
HVYSEVYGTDDDGKKVAIAWV---

---FGFSANDDLTVDGAPLWLKSIPADKRALVYYTTTQYSTGSLINYCNLASNAVLEWPN
DGVVDNEHTPLEGGVYLNNFKDWFHSDGMHSPQQTTNTEYNKEMSSNSFW*ttlyyfffs
tiiliksiyikfiftlkkkkkkkkkkkkkkkkk

Homology FC-BA11 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FC-BA11 (FC-BA11Q) /CSM/FC/FC-BA/FC-BA11Q.Seq.d/                     1199   0.0
VFF549 (VFF549Q) /CSM/VF/VFF5-C/VFF549Q.Seq.d/                        781   0.0
VFN239 (VFN239Q) /CSM/VF/VFN2-B/VFN239Q.Seq.d/                        710   0.0
VFA169 (VFA169Q) /CSM/VF/VFA1-C/VFA169Q.Seq.d/                        686   0.0
VSK240 (VSK240Q) /CSM/VS/VSK2-B/VSK240Q.Seq.d/                        676   0.0
VSJ105 (VSJ105Q) /CSM/VS/VSJ1-A/VSJ105Q.Seq.d/                        676   0.0
VSH672 (VSH672Q) /CSM/VS/VSH6-C/VSH672Q.Seq.d/                        676   0.0
VSE772 (VSE772Q) /CSM/VS/VSE7-C/VSE772Q.Seq.d/                        676   0.0
VHQ437 (VHQ437Q) /CSM/VH/VHQ4-B/VHQ437Q.Seq.d/                        676   0.0
VHP806 (VHP806Q) /CSM/VH/VHP8-A/VHP806Q.Seq.d/                        676   0.0

Homology FC-BA11 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AU284506) Dictyostelium discoideum gamete cDNA clone:FC-BA1...  1199   0.0    1
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...  1152   0.0    1
(Z11691) Dictyostelium discoideum mRNA for Conditioned mediu...  1144   0.0    1
(BJ410422) Dictyostelium discoideum cDNA clone:ddv12a13, 5' ...   781   0.0    1
(AU284507) Dictyostelium discoideum gamete cDNA clone:FC-BA1...   672   0.0    2
(BJ416818) Dictyostelium discoideum cDNA clone:ddv27m10, 5' ...   710   0.0    1
(BJ445671) Dictyostelium discoideum cDNA clone:ddv60b12, 3' ...   636   0.0    2
(BJ437146) Dictyostelium discoideum cDNA clone:ddv33h12, 3' ...   636   0.0    2
(BJ445677) Dictyostelium discoideum cDNA clone:ddv60c12, 3' ...   636   0.0    2
(BJ446642) Dictyostelium discoideum cDNA clone:ddv63j10, 3' ...   636   0.0    2

Homology FC-BA11 vs Protein

Sequences producing significant alignments:                      (bits) Value


AM920689_339(AM920689|pid:none) Xanthomonas campestris pv. campe...    81   1e-13
CP002789_4122(CP002789|pid:none) Xanthomonas campestris pv. raph...    79   4e-13
CP000050_316(CP000050|pid:none) Xanthomonas campestris pv. campe...    79   4e-13
AE008922_313(AE008922|pid:none) Xanthomonas campestris pv. campe...    79   4e-13
AM039952_339(AM039952|pid:none) Xanthomonas campestris pv. vesic...    78   1e-12
CP000937_1732(CP000937|pid:none) Francisella philomiragia subsp....    37   2.5
CP002557_900(CP002557|pid:none) Francisella cf. novicida Fx1, co...    35   5.5
AJ567914_1(AJ567914|pid:none) Mucor circinelloides partial mRNA ...    35   9.4
CP000099_2071(CP000099|pid:none) Methanosarcina barkeri str. Fus...    35   9.4

Homology FC-BA11 vs Genome