Dictyostelium discoideum cDNA Clone FC-AV10

Size:		0.8K
3' sequence:	
5' sequence:	970516
Whole insert?:	*
Accession #:	C24406
Remarks:	3'-A stretch

Sequence FC-AV10

AAAATGGGTC GTCGTCCAGC TAGATGCTAC AGATATTGCA AAAACAAACC
ATACATCAAA TCTAGATATT GTCGTGGTGT ACCAGATGCT AAAATCAGAA
TTTTCGATTT AGGTCGTAAG AAAGCATCAA CTGATGAATT CCCATTATGT
GTTCATCTCA TCTCCCTCGA AAAAGAACAA CTTTCATCAG AAGCCATTGA
AGCTGGTCGT ATTTCATGTA ACAAATACAT CTCAAAGACT GGTGGTAAAG
ATTCATTCCA CATGAGAGTC AGAGTTCACC CATGGCACGT ATTACGTATT
AACAAGATGC TTTCATGCGC TGGTGCAGAT AGACTTCAAA CCGGTATGAG
AGGTGCCTTC GGTAAACCAA TGGGTACTGT TGCTCGTGTT AATATTGGTC
AAATCATTTT CTCCATCAGA ACCAGAGATA ATATGTTAGC CAACGTTGTT
GAAGCTTTAC GTAGATCTTC ATACAAATTC CCAGGTCGTC AAAAGATCGT
TGTCTCAGAG AAATGGGGTT TCACCGCCTA CAATCGTGAA GCTTACCAAA
AATTAAAAGC TGACGGTCGT TTAATGAACG ATGGTGCCAA CGTTAAAGTC
ATCACCAACC ACGGTACTCT TGCTCAATAC GCCAAAGATA TCGCTGCTG-
---------T TTTAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA
AAAAAAAAAA AAAAAAAAAA ATAAAAAAAA AAAAAAAAAA AAAAAAAA

Translated Amino Acid Sequence FC-AV10

KMGRRPARCYRYCKNKPYIKSRYCRGVPDAKIRIFDLGRKKASTDEFPLCVHLISLEKEQ
LSSEAIEAGRISCNKYISKTGGKDSFHMRVRVHPWHVLRINKMLSCAGADRLQTGMRGAF
GKPMGTVARVNIGQIIFSIRTRDNMLANVVEALRRSSYKFPGRQKIVVSEKWGFTAYNRE
AYQKLKADGRLMNDGANVKVITNHGTLAQYAKDIAA---

---FKKKKKKKKKKKKKKKKKKKIKKKKKKKK

Homology FC-AV10 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FC-AV10 (FC-AV10Q) /CSM/FC/FC-AV/FC-AV10Q.Seq.d/                     1287   0.0
FC-AS07 (FC-AS07Q) /CSM/FC/FC-AS/FC-AS07Q.Seq.d/                     1279   0.0
FC-303 (FC-303Q) /CSM/CG/CG-FC/FC-303Q.Seq.d/                        1279   0.0
FC-BI12 (FC-BI12Q) /CSM/FC/FC-BI/FC-BI12Q.Seq.d/                     1243   0.0
SSH847 (SSH847Q) /CSM/SS/SSH8-B/SSH847Q.Seq.d/                       1237   0.0
VSJ723 (VSJ723Q) /CSM/VS/VSJ7-A/VSJ723Q.Seq.d/                       1189   0.0
AFB142 (AFB142Q) /CSM/AF/AFB1-B/AFB142Q.Seq.d/                       1140   0.0
VSF869 (VSF869Q) /CSM/VS/VSF8-C/VSF869Q.Seq.d/                        997   0.0
SLB744 (SLB744Q) /CSM/SL/SLB7-B/SLB744Q.Seq.d/                        829   0.0
AHJ376 (AHJ376Q) /CSM/AH/AHJ3-D/AHJ376Q.Seq.d/                        823   0.0

Homology FC-AV10 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(C24406) Dictyostelium discoideum gamete cDNA, clone FC-AV10.    1287   0.0    1
(C24336) Dictyostelium discoideum gamete cDNA, clone FC-AS07.    1279   0.0    1
(BJ340671) Dictyostelium discoideum cDNA clone:dda3c11, 3' e...  1140   0.0    1
(AU038541) Dictyostelium discoideum slug cDNA, clone SSH847.     1124   0.0    1
(AU270369) Dictyostelium discoideum vegetative cDNA clone:VS...  1110   0.0    3
(AU270368) Dictyostelium discoideum vegetative cDNA clone:VS...   850   0.0    2
(AU284720) Dictyostelium discoideum gamete cDNA clone:FC-BI1...   694   0.0    2
(AU265925) Dictyostelium discoideum vegetative cDNA clone:VS...   997   0.0    1
(BJ335341) Dictyostelium discoideum cDNA clone:dda49h19, 5' ...   823   0.0    1
(AU034102) Dictyostelium discoideum slug cDNA, clone SLB744.      573   0.0    2

Homology FC-AV10 vs Protein

Sequences producing significant alignments:                      (bits) Value


HB838406_1(HB838406|pid:none) Sequence 187620 from Patent EP2090...   336   8e-91
FB902303_1(FB902303|pid:none) Sequence 121576 from Patent WO2008...   325   1e-87
EU302535_1(EU302535|pid:none) Lineus viridis ribosomal protein r...   325   2e-87
GU084310_1(GU084310|pid:none) Manduca sexta ribosomal protein L1...   324   2e-87
BT076001_1(BT076001|pid:none) Caligus rogercresseyi clone crog-e...   324   3e-87
HQ424770_1(HQ424770|pid:none) Euphydryas aurinia ribosomal prote...   323   6e-87
HM467199_1(HM467199|pid:none) Mythimna separata QM protein mRNA,...   322   9e-87
BT121865_1(BT121865|pid:none) Lepeophtheirus salmonis Atlantic f...   322   1e-86
DQ440008_1(DQ440008|pid:none) Aedes aegypti clone AE-200A riboso...   322   2e-86
EU195426_1(EU195426|pid:none) Mucor racemosus strain PTCC 5305 p...   321   2e-86

Homology FC-AV10 vs Genome