Dictyostelium discoideum cDNA Clone FC-AT09

Size:		1.1K
3' sequence:	KS970506
5' sequence:	-
Whole insert?:	*
Accession #:	-
Remarks:	*

Sequence FC-AT09

---------- CCAGTAAGAC GAAAATCAGG GATTATAGTT AATGCAGGGG
AAAATGGAGT AATCTTATTA ACAAAAACAA AAGAACCAAT AGGAACACGA
TTAACAGGAG TAGTATTTAA AGAAGTACAA CGAACGGGAT TATTAAAAAA
TGTATCAATA TCAAAATATA TAATATAATG GATAATTTAC AAACCTATAA
ATTAAGATTA TTAGATAAAT ATGTATTAAA TAAATGTATG AGTTTAAATA
GAAGCAATAC AAGTACAATA GCATTAGATC ATGTAAATAT AAAAATGAAT
TATAGAAAGA AAAAAAAAGA AGTGTATCAA ATGATAGAAT TAATAACATT
ATTTGAACAA ATAACAGGAG AAAAACCATT GATAAAAAAA AAAAAAAAAA
AAAAAAAAAA AAAAAAAAAA AA

Translated Amino Acid Sequence FC-AT09

---sktkirdys*crgkwsnlinknkrtnrntinrssi*RSTTNGIIKKCINIKIYNIMD
NLQTYKLRLLDKYVLNKCMSLNRSNTSTIALDHVNIKMNYRKKKKEVYQMIELITLFEQI
TGEKPLIKKKKKKKKKKKK

Homology FC-AT09 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


MIT-GENOME (MIT-GENOMEQ) /CSM/OTHERS/MIT-GENOMEQ.Seq.d/               686   0.0
FC-AT09 (FC-AT09Q) /CSM/FC/FC-AT/FC-AT09Q.Seq.d/                      686   0.0
VSJ135 (VSJ135Q) /CSM/VS/VSJ1-B/VSJ135Q.Seq.d/                        533   e-151
VSH425 (VSH425Q) /CSM/VS/VSH4-B/VSH425Q.Seq.d/                        523   e-148
FC-AD13 (FC-AD13Q) /CSM/FC/FC-AD/FC-AD13Q.Seq.d/                      502   e-141
VSH125 (VSH125Q) /CSM/VS/VSH1-B/VSH125Q.Seq.d/                        480   e-135
FC-AB13 (FC-AB13Q) /CSM/FC/FC-AB/FC-AB13Q.Seq.d/                      436   e-121
VSC710 (VSC710Q) /CSM/VS/VSC7-A/VSC710Q.Seq.d/                        424   e-118
VSD628 (VSD628Q) /CSM/VS/VSD6-B/VSD628Q.Seq.d/                        408   e-113
FC-IC0669 (FC-IC0669Q) /CSM/FC-IC/FC-IC0669Q.Seq.d/                   234   9e-61

Homology FC-AT09 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(AB000109) Dictyostelium discoideum mitochondrial DNA, compl...   593   0.0    2
(D63523) Dictyostelium discoideum mitochondrial rpl16, rpl14...   593   0.0    2
(AU284409) Dictyostelium discoideum gamete cDNA clone:FC-AT0...   593   0.0    2
(AU269460) Dictyostelium discoideum vegetative cDNA clone:VS...   440   e-152  2
(AU267428) Dictyostelium discoideum vegetative cDNA clone:VS...   517   e-142  1
(AU284252) Dictyostelium discoideum gamete cDNA clone:FC-AD1...   377   e-137  4
(AU266943) Dictyostelium discoideum vegetative cDNA clone:VS...   347   e-128  3
(AU284232) Dictyostelium discoideum gamete cDNA clone:FC-AB1...   319   e-116  2
(AU262741) Dictyostelium discoideum vegetative cDNA clone:VS...   424   e-114  1
(AU264334) Dictyostelium discoideum vegetative cDNA clone:VS...   345   e-104  3

Homology FC-AT09 vs Protein

Sequences producing significant alignments:                      (bits) Value


(O21033) RecName: Full=60S ribosomal protein L14, mitochondrial;...    96   8e-19
DQ336395_39(DQ336395|pid:none) Dictyostelium citrinum mitochondr...    78   1e-13
AY700145_17(AY700145|pid:none) Polysphondylium pallidum mitochon...    52   1e-05
EU275726_35(EU275726|pid:none) Polysphondylium pallidum strain P...    49   9e-05
CP002244_96(CP002244|pid:none) Candidatus Tremblaya princeps PCI...    45   0.001
(Q2N9C1) RecName: Full=50S ribosomal protein L14;  &CP000157_162...    43   0.006
AP011529_1719(AP011529|pid:none) Deferribacter desulfuricans SSM...    42   0.008
(Q5FTZ3) RecName: Full=50S ribosomal protein L14;  &CP000009_354...    42   0.011
(Q1GPA9) RecName: Full=50S ribosomal protein L14;  &CP000356_278...    42   0.011
CR382132_727(CR382132|pid:none) Yarrowia lipolytica strain CLIB1...    42   0.014

Homology FC-AT09 vs Genome