Dictyostelium discoideum cDNA Clone FC-AL11

Size:		1462
3' sequence:	HS970212
5' sequence:	HS970226
Whole insert?:	Y
Accession #:	C22969
Remarks:	Int seq: RI980930

Sequence FC-AL11

GTTTTTTTTT TACTTAATCA ATAAAAAATT AAAACAAATC AATTATAGTG
TAAACCCTTG TAAAAATTAA ATAAAAAACA TTGTATTATA TTCCACCTCA
TATTTTTTTT TTCCATATTA AAATCACCTT TTTTATATAT AATATTTTAA
AAAAAAAATA AAAAAAATAA TTAAAAATGT CAGCTTTCGA AATTGAACAT
TTAGCAAGTT GCATTACTGC TCACGCATGG AATGCTGATA GATCAAGAGT
CGCTTTATGC CCAAATAATA ATGAAGTACA CATTTATGCC AAACAAGGAA
CCTCATGGGT TGTTGAACAT GTTTTAGCTG AACATGATCA ACTTGTTACA
TCAATTGATT GGGCACCAAA AACTAATCGT ATTTTAACAT CATCACAAGA
TCGTAATGCA TACGTTTGGA CATTTAAAGA TGGTCAATGG AAACCAGTAT
TAGTATTACT TCGTATTAAT AGAGCAGCCA CTCATGTTAA ATGGTCACCA
CAAGAAAACA AATTTGCTGT TGCAACTGGT GCCAAATTGG TATGTATTTG
TTTCTTTGAA GAGGAACATG ATTGGTGGGC ATCAAATCAT ATCAAGAAGC
ATAAATCAAC CGTATTAAAG GTTGACTGGC ATCCAAACAA TTTATTATTG
GCAACCTCAT CCTCTGACTA CAAGGTTAGA GTATTCGACG CCTACATAAA
GAAAGCCGAT GGTCGTAGTG TCACTCGTCC ATACGGTGAA GTCGCTTTTG
GTGAACCAGT CTTTGAATTT GACCAATGCG CCTCATGGGT CCATGCCCTC
AAATGGTCCC CATCCGGTAG TACCTTGGCT TACTCCTCAC ACGATGGTGT
CTTTGCCGTT GCAAACTTTT CAACCAATCC ACCAACCATC GAAAAACTCA
GAGTTCGTAA TTTACCATTA CGTGATCTCC TTTACATCAC TGAAAACTCT
ATCGCCGGTG TTGGTTACGA TTGTGCTCCA CTTTTAATCA CTAATCAAAA
CGGTTGGAAA TATTCTGGTG AAATGGATAA GGCCTCTGAA GGTGGTGCTG
CCGCTGGCTC TGAAACCTCT GCTCGTAAAC TCTTCCAAAA TAAAGTAGAC
CTTGGTGAAT CAAAATCTGC CGATAAAAAG TTAACAACCG TTCATCAAAA
TTGTATTACT TCAATCGTTC CATTCAAGAG TGTAGGTGGT GTCGTCTCTG
ATTTCAGTAC CTCTGGTTTA GATGGTAACA TTGTCGTATG GCATGTAAAA
GCTCTTGAAG CTAAAAATAA ATTCAAAGTC ATTTAAATGA GATAAAAAAA
TAAAAATTTT AAATTATAAA AAAAAAAAAA AAAAAAAAAA AAACATATAT
AAAACTCATT CAACTACCTT CAATTATTTC CAAGAGTTAA ATTTTATATA
TTGAAAAAAA AGAGATTATA GTAAAAAAAT AAAAATTATA AAAAAAGTAT
TTATTAAAAA AA

Translated Amino Acid Sequence FC-AL11

ffft*sikn*nksiiv*tlvkik*ktlyyipphifffhikitffiynilkkk*kk*LKMS
AFEIEHLASCITAHAWNADRSRVALCPNNNEVHIYAKQGTSWVVEHVLAEHDQLVTSIDW
APKTNRILTSSQDRNAYVWTFKDGQWKPVLVLLRINRAATHVKWSPQENKFAVATGAKLV
CICFFEEEHDWWASNHIKKHKSTVLKVDWHPNNLLLATSSSDYKVRVFDAYIKKADGRSV
TRPYGEVAFGEPVFEFDQCASWVHALKWSPSGSTLAYSSHDGVFAVANFSTNPPTIEKLR
VRNLPLRDLLYITENSIAGVGYDCAPLLITNQNGWKYSGEMDKASEGGAAAGSETSARKL
FQNKVDLGESKSADKKLTTVHQNCITSIVPFKSVGGVVSDFSTSGLDGNIVVWHVKALEA
KNKFKVI*mr*knknfkl*kkkkkkkkhi*nsfnylqlfprvkfyilkkkrl**knknyk
ksiy*k

Homology FC-AL11 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FC-AL11 (FC-AL11Q) /CSM/FC/FC-AL/FC-AL11Q.Seq.d/                     2169   0.0
FC-208 (FC-208Q) /CSM/CG/CG-FC/FC-208Q.Seq.d/                        2169   0.0
AFD360 (AFD360Q) /CSM/AF/AFD3-C/AFD360Q.Seq.d/                       1455   0.0
VFH613 (VFH613Q) /CSM/VF/VFH6-A/VFH613Q.Seq.d/                       1405   0.0
AFJ120 (AFJ120Q) /CSM/AF/AFJ1-A/AFJ120Q.Seq.d/                       1362   0.0
VFI561 (VFI561Q) /CSM/VF/VFI5-C/VFI561Q.Seq.d/                       1356   0.0
SFI444 (SFI444Q) /CSM/SF/SFI4-B/SFI444Q.Seq.d/                       1324   0.0
CFC556 (CFC556Q) /CSM/CF/CFC5-C/CFC556Q.Seq.d/                       1285   0.0
AFM674 (AFM674Q) /CSM/AF/AFM6-D/AFM674Q.Seq.d/                       1273   0.0
VFE696 (VFE696Q) /CSM/VF/VFE6-D/VFE696Q.Seq.d/                       1257   0.0

Homology FC-AL11 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AF095930|AF095930.1 Dictyostelium discoideum p41-Arc (arpD) ...  2169   0.0    3
CB930193|CB930193.1 ri92a06.y1 Meloidogyne chitwoodi egg pAM...    54   0.006  1
AC124921|AC124921.3 Rattus norvegicus clone CH230-214L24, **...    50   0.087  1
AC094767|AC094767.3 Rattus norvegicus clone CH230-5L7, *** S...    50   0.087  1
AI087480|AI087480.1 SWAMCAC16H08SK Brugia malayi adult male ...    38   1.0    2
AI784710|AI784710.1 SWAMCAC30C09SK Brugia malayi adult male ...    38   1.1    2
AW179914|AW179914.1 SWYD25CAU05D03SK Brugia malayi young adu...    38   1.3    2
BE132434|BE132434.1 SWYACAL09G02SK Brugia malayi young adult...    38   1.3    2
AC124472|AC124472.4 Mus musculus BAC clone RP24-83E15 from c...    46   1.4    1
BX649612|BX649612.5 Zebrafish DNA sequence from clone CH211-...    46   1.4    1

Homology FC-AL11 vs Protein

Sequences producing significant alignments:                      (bits) Value


AJ720885_1(AJ720885|pid:none) Gallus gallus mRNA for hypothetica...   328   5e-88
EU868834_1(EU868834|pid:none) Sus scrofa actin related protein 2...   322   3e-86
AB170082_1(AB170082|pid:none) Macaca fascicularis brain cDNA clo...   321   6e-86
EU961854_1(EU961854|pid:none) Zea mays clone 238674 actin-relate...   321   6e-86
(Q92747) RecName: Full=Actin-related protein 2/3 complex subunit...   321   6e-86
BC071519_1(BC071519|pid:none) Danio rerio zgc:86896, mRNA (cDNA ...   321   8e-86
BC155744_1(BC155744|pid:none) Danio rerio zgc:86896, mRNA (cDNA ...   321   8e-86
BC073411_1(BC073411|pid:none) Xenopus laevis MGC80877 protein, m...   320   1e-85
(Q1JP79) RecName: Full=Actin-related protein 2/3 complex subunit...   320   1e-85
EU868833_1(EU868833|pid:none) Sus scrofa actin related protein 2...   320   2e-85

Homology FC-AL11 vs Genome