Dictyostelium discoideum cDNA Clone FC-AK17

Size:		1.5K
3' sequence:	AK970107
5' sequence:	AK970113
Whole insert?:	*
Accession #:	-
Remarks:	-

Sequence FC-AK17

ATTAATTTGG AGATATCAAT TTAATCCAAC TGAAACACCA ACTGAAACTC
CAACTGAAAC TCCAACTCAA ACACCAACTC AAACACCAAC TGAAACTCCA
ACCCAAACTC CAACTGAAAC TCCAACTGAA ACTCCAACTG AAACTCCAAC
TGAAACTCCA ACTGAAACTC CAACTGAAAC TCCAACTGAA ACTCCAACTG
AAACTCCAAC TCAAACTCCA ACTGAAACTC CAACTGAAAC TCCAACTCAA
ACTCCAACTG AAACTCCAAC CCAAACCCCA ACACAAACAC CAACACCAAC
ACCAAACCCA GGTAATTGTA ATGTTAGTGT TACCCTAAAG GTTACTTCTC
AATGGGTTGA AAATAATCAA AACTTTATAC AAGTTGAGGC AACTATTTTC
AATTATGGTC AATCAGAAAT CACTGGTTTT TCATTCCAAT TATTTAATAT
TATCAGTATT TGGAATGTTG ATCAAACATC ATTCAATAGC TACAGTCTTC
CAATTTGGTT ACCAGCCATT CAAGTTGGTT CATCATTCAG TTTTGGTTAT
ATTCAAAAAA CTGATACGTT GTCCCACTCT CCTCCCAATC AGTTGTATGT
CAGAAATTCC AA-------- --ATATTTGA TCTTGTTAAC ATTTGGGGCG
TTGAATTATT ATCAAATAAT ACTTATCAAC TCCCAAGTTG GGTATATAGT
ATCCCAGTTG GTTCATCTCA CAATTTTGGT TATATCCAAA AATCAAACCA
TCTTTTACCA TTTATTCACA ATTACCAACT TGTCAAGTAA CTCCAACTCC
AACACCAACT CAAACTCCAA CTCAAACTCC AACTGAAACC CCAACTCCAA
CCGAAACTCC AACCGAAACT CCAACTCAAA CTCCAACTCA AACACCAACT
AATCACCAAT TCCAAGACCA ATAACTTGTT CAAAACTTGA TGATGTTCTT
AATTTCAATA GCACAGAAAC TATTTCACGT AAAGGTAGAG GTCCAACCTA
CTGTATTGAT GGCTATGGTT CAGAATGTGA AACCAACGAT GTTGATGGAA
GAATTAAATG TACAACAAAG AGCAATTTCA TGAGCTGTAA GGGTGATCAT
TTAGTTTGTA AATCAAACTA TCTTACATGT AAAGTCAATA TTTCTGAAGG
TACACCATTC CATGTTCACG ATTCTTCTTT ACAATAAAAT ATTTTAAATA
ACCTATCAAA GAAATAAATA AATTTTAAAA TTTCTTTTTT AAATTAAAAA
AAAAAAAACA AA

Translated Amino Acid Sequence FC-AK17

LIWRYQFNPTETPTETPTETPTQTPTQTPTETPTQTPTETPTETPTETPTETPTETPTET
PTETPTETPTQTPTETPTETPTQTPTETPTQTPTQTPTPTPNPGNCNVSVTLKVTSQWVE
NNQNFIQVEATIFNYGQSEITGFSFQLFNIISIWNVDQTSFNSYSLPIWLPAIQVGSSFS
FGYIQKTDTLSHSPPNQLYVRNS---

---YLILLTFGALNYYQIILINSQVGYIVSQLVHLTILVISKNQTIFYHLFTITNLSSNS
NSNTNSNSNSNSN*npnsnrnsnrnsnsnsnsntn*spiprpitcsklddvlnfnsteti
srkgrgptycidgygsecetndvdgrikcttksnfmsckgdhlvcksnyltckvnisegt
pfhvhdsslq*nilnnlskk*infkisfln*kkknk

Homology FC-AK17 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FC-AK17 (FC-AK17Q) /CSM/FC/FC-AK/FC-AK17Q.Seq.d/                      848   0.0
VSJ853 (VSJ853Q) /CSM/VS/VSJ8-C/VSJ853Q.Seq.d/                        539   e-152
VHO515 (VHO515Q) /CSM/VH/VHO5-A/VHO515Q.Seq.d/                        539   e-152
VHN694 (VHN694Q) /CSM/VH/VHN6-D/VHN694Q.Seq.d/                        539   e-152
VHJ424 (VHJ424Q) /CSM/VH/VHJ4-A/VHJ424Q.Seq.d/                        539   e-152
VHD539 (VHD539Q) /CSM/VH/VHD5-B/VHD539Q.Seq.d/                        539   e-152
VHD343 (VHD343Q) /CSM/VH/VHD3-B/VHD343Q.Seq.d/                        539   e-152
VHB222 (VHB222Q) /CSM/VH/VHB2-A/VHB222Q.Seq.d/                        539   e-152
VFJ620 (VFJ620Q) /CSM/VF/VFJ6-A/VFJ620Q.Seq.d/                        539   e-152
SHC383 (SHC383Q) /CSM/SH/SHC3-D/SHC383Q.Seq.d/                        539   e-152

Homology FC-AK17 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(U20608) Dictyostelium discoideum unknown spore germination-...   509   0.0    7
(AU284314) Dictyostelium discoideum gamete cDNA clone:FC-AK1...   549   0.0    2
(BJ439228) Dictyostelium discoideum cDNA clone:ddv39f20, 3' ...   525   0.0    3
(BJ404525) Dictyostelium discoideum cDNA clone:dds28f21, 3' ...   525   0.0    3
(BJ445644) Dictyostelium discoideum cDNA clone:ddv60m03, 3' ...   525   0.0    3
(BJ438769) Dictyostelium discoideum cDNA clone:ddv38m09, 3' ...   525   0.0    3
(BJ445244) Dictyostelium discoideum cDNA clone:ddv58k24, 3' ...   525   0.0    3
(BJ432860) Dictyostelium discoideum cDNA clone:ddv20g06, 3' ...   525   0.0    2
(BJ442228) Dictyostelium discoideum cDNA clone:ddv49p06, 3' ...   525   0.0    2
(BJ437084) Dictyostelium discoideum cDNA clone:ddv33k06, 3' ...   525   0.0    2

Homology FC-AK17 vs Protein

Sequences producing significant alignments:                      (bits) Value


T18270(T18270) hypothetical protein - slime mold (Dictyostelium ...   256   2e-66
(P22698) RecName: Full=Spore germination protein 270-11;  &B3562...    71   1e-10
AC116957_104(AC116957|pid:none) Dictyostelium discoideum chromos...    50   3e-04
BT000696_1(BT000696|pid:none) Arabidopsis thaliana clone RAFL07-...    49   6e-04
AF538680_1(AF538680|pid:none) Gossypium hirsutum endo-1,4-beta-g...    48   0.001
AC116977_84(AC116977|pid:none) Dictyostelium discoideum chromoso...    45   0.007
AC116956_44(AC116956|pid:none) Dictyostelium discoideum chromoso...    45   0.011
DQ357228_1(DQ357228|pid:none) Glycine max clone pSC8c endo-1,4-b...    43   0.033
(P54681) RecName: Full=Protein rtoA; AltName: Full=Ratio-A; Flag...    43   0.043
HB845144_1(HB845144|pid:none) Sequence 194358 from Patent EP2090...    43   0.043

Homology FC-AK17 vs Genome