Homology FC-AK15 vs Protein
Query= FC-AK15 (FC-AK15Q) /CSM/FC/FC-AK/FC-AK15Q.Seq.d/
(874 letters)
Database: nrp_B
5,349,213 sequences; 1,732,582,204 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54ZW5) RecName: Full=40S ribosomal protein S3a; 471 e-131
AC116977_69(AC116977|pid:none) Dictyostelium discoideum chromoso... 470 e-131
EU683898_1(EU683898|pid:none) Chironomus riparius ribosomal prot... 251 3e-65
(A7S3J7) RecName: Full=40S ribosomal protein S3a; 247 7e-64
(B3S6Y0) RecName: Full=40S ribosomal protein S3a; 245 3e-63
AY603568_1(AY603568|pid:none) Culicoides sonorensis clone CsRPS3... 244 3e-63
(P49395) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 244 4e-63
(Q4KTD9) RecName: Full=40S ribosomal protein S3a; &AY857460_1(A... 241 4e-62
(Q5G5C4) RecName: Full=40S ribosomal protein S3a; &AY850276_1(A... 239 1e-61
(Q1HRR3) RecName: Full=40S ribosomal protein S3a; &DQ440031_1(D... 239 2e-61
DQ252485_1(DQ252485|pid:none) Solanum tuberosum clone 048H05 cyc... 238 3e-61
EF082968_1(EF082968|pid:none) Picea sitchensis clone WS02910_B19... 238 4e-61
(P49397) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 237 5e-61
AP004001_29(AP004001|pid:none) Oryza sativa Japonica Group genom... 237 7e-61
(Q9MBB3) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 237 7e-61
(B0WN96) RecName: Full=40S ribosomal protein S3a; 237 7e-61
(Q6EV04) RecName: Full=40S ribosomal protein S3a; &AJ783867_1(A... 236 9e-61
DQ241862_1(DQ241862|pid:none) Solanum tuberosum clone 027B03 40S... 236 9e-61
(A8NX92) RecName: Full=40S ribosomal protein S1; 236 9e-61
EZ114811_1(EZ114811|pid:none) TSA: Ochlerotatus triseriatus OT-1... 236 1e-60
DQ252490_1(DQ252490|pid:none) Solanum tuberosum clone 059D09 cyc... 235 2e-60
(A7L6A0) RecName: Full=40S ribosomal protein S3a; &EF675773_1(E... 235 3e-60
EU139170_1(EU139170|pid:none) Flustra foliacea putative 40S ribo... 234 4e-60
(A5B4K1) RecName: Full=40S ribosomal protein S3a-1; &AM446364_1... 234 4e-60
EF065683_1(EF065683|pid:none) Cymbidium hybrid cultivar RPS3 mRN... 234 6e-60
AP008218_722(AP008218|pid:none) Oryza sativa (japonica cultivar-... 234 6e-60
EU124994_1(EU124994|pid:none) Eurythoe complanata ribosomal prot... 234 6e-60
CS559986_1(CS559986|pid:none) Sequence 573 from Patent WO2006032... 233 8e-60
BT065729_1(BT065729|pid:none) Zea mays full-length cDNA clone ZM... 233 8e-60
DQ268849_1(DQ268849|pid:none) Solanum tuberosum clone 155F06 cyc... 233 1e-59
CS559752_1(CS559752|pid:none) Sequence 339 from Patent WO2006032... 233 1e-59
(B0CY45) RecName: Full=40S ribosomal protein S1; 233 1e-59
AM048925_1(AM048925|pid:none) Timarcha balearica mRNA for riboso... 232 2e-59
CS559904_1(CS559904|pid:none) Sequence 491 from Patent WO2006032... 232 2e-59
JC5250(JC5250;PC4306;A41974;S45052)ribosomal protein S3a, cytoso... 232 2e-59
(Q42262) RecName: Full=40S ribosomal protein S3a-2; &AJ001342_1... 232 2e-59
BC066926_1(BC066926|pid:none) Homo sapiens ribosomal protein S3A... 232 2e-59
CS560132_1(CS560132|pid:none) Sequence 719 from Patent WO2006032... 232 2e-59
L13802_1(L13802|pid:none) Homo sapiens (clone 03) liver expessed... 232 2e-59
AB171328_1(AB171328|pid:none) Macaca fascicularis brain cDNA clo... 232 2e-59
(A6YPJ8) RecName: Full=40S ribosomal protein S3a; &EF639009_1(E... 232 2e-59
CS559646_1(CS559646|pid:none) Sequence 233 from Patent WO2006032... 232 2e-59
BT034241_1(BT034241|pid:none) Zea mays full-length cDNA clone ZM... 232 2e-59
(P61247) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 232 2e-59
(P61246) RecName: Full=40S ribosomal protein S3a; Flags: Fragmen... 232 2e-59
HP429362_1(HP429362|pid:none) TSA: Triatoma matogrossensis Tm-94... 232 2e-59
AF052503_1(AF052503|pid:none) Oryza sativa S-phase-specific ribo... 232 2e-59
HP429361_1(HP429361|pid:none) TSA: Triatoma matogrossensis Tm-94... 232 2e-59
EU247153_1(EU247153|pid:none) Lycosa singoriensis clone LSsin618... 232 2e-59
(Q6DV02) RecName: Full=40S ribosomal protein S3a; 231 3e-59
HH969481_1(HH969481|pid:none) Sequence 291 from Patent EP1641930. 231 3e-59
(P97351) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 231 3e-59
HQ844972_1(HQ844972|pid:none) Fenneropenaeus merguiensis ribosom... 231 4e-59
(B8PIG4) RecName: Full=40S ribosomal protein S1; 231 4e-59
EU961149_1(EU961149|pid:none) Zea mays clone 232905 40S ribosoma... 231 5e-59
DQ886750_1(DQ886750|pid:none) Argas monolakensis 40S ribosomal p... 230 6e-59
EF444539_1(EF444539|pid:none) Pteromalus puparum ribosomal prote... 230 6e-59
(A8HS48) RecName: Full=40S ribosomal protein S3a; 230 6e-59
CS559714_1(CS559714|pid:none) Sequence 301 from Patent WO2006032... 230 6e-59
EF145218_1(EF145218|pid:none) Populus trichocarpa clone WS01121_... 230 8e-59
(Q4R4Z6) RecName: Full=40S ribosomal protein S3a; &AB169748_1(A... 230 8e-59
AK003158_1(AK003158|pid:none) Mus musculus 18-day embryo whole b... 230 8e-59
(Q4T8S6) RecName: Full=40S ribosomal protein S3a; 230 8e-59
EF147866_1(EF147866|pid:none) Populus trichocarpa clone WS0125_I... 229 1e-58
BT053090_1(BT053090|pid:none) Medicago truncatula clone MTYFL_FM... 229 1e-58
(B5DGL6) RecName: Full=40S ribosomal protein S3a; &BT043775_1(B... 229 1e-58
GU589367_1(GU589367|pid:none) Ictalurus punctatus clone CBCZ5309... 229 1e-58
(P0CQ58) RecName: Full=40S ribosomal protein S1; &(P0CQ59) RecN... 229 1e-58
AF402811_1(AF402811|pid:none) Ictalurus punctatus 40S ribosomal ... 229 2e-58
FQ857208_7(FQ857208|pid:none) Piriformospora indica PIRI_contig_... 229 2e-58
(Q4PM31) RecName: Full=40S ribosomal protein S3a; &DQ066297_1(D... 228 2e-58
(B5FZS9) RecName: Full=40S ribosomal protein S3a; &DQ214670_1(D... 228 2e-58
(Q6PBY1) RecName: Full=40S ribosomal protein S3a; &AY648734_1(A... 228 3e-58
CS559810_1(CS559810|pid:none) Sequence 397 from Patent WO2006032... 228 3e-58
BT083120_1(BT083120|pid:none) Anoplopoma fimbria clone afim-evh-... 228 3e-58
(O73813) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 228 3e-58
(Q642T2) RecName: Full=40S ribosomal protein S3a; &BC080969_1(B... 228 4e-58
BT097342_1(BT097342|pid:none) Soybean clone JCVI-FLGm-21L16 unkn... 228 4e-58
(Q56FG9) RecName: Full=40S ribosomal protein S3a; &AY961531_1(A... 227 5e-58
(Q98TX2) RecName: Full=40S ribosomal protein S3a; &AF321768_1(A... 227 5e-58
(P52813) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 227 5e-58
HH969564_1(HH969564|pid:none) Sequence 374 from Patent EP1641930. 227 5e-58
AY550961_1(AY550961|pid:none) Sparus aurata V-Fos transformation... 227 5e-58
(Q801S3) RecName: Full=40S ribosomal protein S3a-A; &BC047260_1... 227 7e-58
(B6DDU1) RecName: Full=40S ribosomal protein S3a; &EU934301_1(E... 227 7e-58
GQ229194_1(GQ229194|pid:none) Actias selene s3a protein mRNA, co... 227 7e-58
GQ452008_1(GQ452008|pid:none) Heliconius melpomene ribosomal pro... 226 9e-58
HH969516_1(HH969516|pid:none) Sequence 326 from Patent EP1641930. 226 9e-58
HH969694_1(HH969694|pid:none) Sequence 504 from Patent EP1641930. 226 9e-58
D01058_1(D01058|pid:none) Catharanthus roseus cyc07 mRNA, comple... 226 9e-58
(P33444) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 226 9e-58
(P49198) RecName: Full=40S ribosomal protein S3a; &L31645_1(L31... 226 1e-57
(A9USH8) RecName: Full=40S ribosomal protein S3a; 226 1e-57
D26058_1(D26058|pid:none) Catharanthus roseus cyc07 gene, comple... 226 2e-57
(Q9CAV0) RecName: Full=40S ribosomal protein S3a-1; &AC009465_2... 226 2e-57
(O43999) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 226 2e-57
AY752836_1(AY752836|pid:none) Culicoides sonorensis clone CsRPS3... 225 2e-57
(A8E604) RecName: Full=40S ribosomal protein S3a-B; &BC153786_1... 225 2e-57
AM048964_1(AM048964|pid:none) Georissus sp. APV-2005 mRNA for ri... 225 3e-57
(A5JSW9) RecName: Full=40S ribosomal protein S3a; &EF565369_1(E... 225 3e-57
GU084308_1(GU084308|pid:none) Manduca sexta ribosomal protein S3... 225 3e-57
FJ268645_1(FJ268645|pid:none) Sus scrofa ribosomal protein S3A m... 225 3e-57
(P49396) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 224 4e-57
JF811439_1(JF811439|pid:none) Biston betularia 40S ribosomal pro... 224 4e-57
CS559692_1(CS559692|pid:none) Sequence 279 from Patent WO2006032... 224 5e-57
(Q64FN2) RecName: Full=40S ribosomal protein S3a; &AY705974_1(A... 223 8e-57
(A8QD49) RecName: Full=40S ribosomal protein S1; 223 1e-56
AK365175_1(AK365175|pid:none) Hordeum vulgare subsp. vulgare mRN... 223 1e-56
BT093927_1(BT093927|pid:none) Soybean clone JCVI-FLGm-17N24 unkn... 222 2e-56
AY849388_1(AY849388|pid:none) Vitis vinifera cultivar Riesling c... 221 5e-56
(Q4P4C2) RecName: Full=40S ribosomal protein S1; &FQ311436_156(... 220 9e-56
BT092794_1(BT092794|pid:none) Soybean clone JCVI-FLGm-11D2 unkno... 220 9e-56
AK365720_1(AK365720|pid:none) Hordeum vulgare subsp. vulgare mRN... 219 1e-55
(P48154) RecName: Full=40S ribosomal protein S3a; &S43584(S4358... 219 1e-55
AF542188_1(AF542188|pid:none) Triticum aestivum cyc07 mRNA, comp... 219 1e-55
FR824084_20(FR824084|pid:none) Albugo laibachii Nc14, genomic co... 219 2e-55
CP001330_369(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 218 4e-55
(C7YTD6) RecName: Full=40S ribosomal protein S1; 217 6e-55
(B4MEW8) RecName: Full=40S ribosomal protein S3a; 217 7e-55
EF634853_1(EF634853|pid:none) Koerneria sp. RS1982 small subunit... 217 7e-55
EF634852_1(EF634852|pid:none) Pristionchus sp. 15 RS5229 small s... 216 1e-54
EF634838_1(EF634838|pid:none) Pristionchus entomophagus small su... 216 1e-54
BT083412_1(BT083412|pid:none) Drosophila melanogaster LD08549 fu... 216 1e-54
(Q5AS60) RecName: Full=40S ribosomal protein S1; 216 1e-54
(B3P9W1) RecName: Full=40S ribosomal protein S3a; &(P55830) Rec... 216 1e-54
CP003003_590(CP003003|pid:none) Myceliophthora thermophila ATCC ... 216 2e-54
EF634835_1(EF634835|pid:none) Pristionchus pacificus small subun... 216 2e-54
(B6HFE0) RecName: Full=40S ribosomal protein S1; &AM920435_44(A... 216 2e-54
(B4JZQ9) RecName: Full=40S ribosomal protein S3a; 215 2e-54
EF634845_1(EF634845|pid:none) Pristionchus pauli small subunit r... 215 2e-54
(B9W790) RecName: Full=40S ribosomal protein S1; &(P0CC07) RecN... 215 3e-54
EF634847_1(EF634847|pid:none) Pristionchus sp. 10 RS5133 small s... 214 5e-54
FP929138_913(FP929138|pid:none) Leptosphaeria maculans JN3 lm_Su... 214 5e-54
(B4NHI4) RecName: Full=40S ribosomal protein S3a; 214 6e-54
(A3LX67) RecName: Full=40S ribosomal protein S1-B; &CP000500_19... 213 8e-54
CP003009_629(CP003009|pid:none) Thielavia terrestris NRRL 8126 c... 213 8e-54
(A7E4H3) RecName: Full=40S ribosomal protein S1; 213 8e-54
EF634843_1(EF634843|pid:none) Pristionchus sp. 6 RS5101 small su... 213 8e-54
(A1CZL7) RecName: Full=40S ribosomal protein S1; &(B0Y356) RecN... 213 8e-54
HE605203_1029(HE605203|pid:none) Candida parapsilosis strain CDC... 213 1e-53
FJ599971_1(FJ599971|pid:none) Pfiesteria piscicida clone Ppi+Rho... 213 1e-53
(C5GS07) RecName: Full=40S ribosomal protein S1; &(C5JZ38) RecN... 212 2e-53
(Q871N9) RecName: Full=40S ribosomal protein S1; AltName: Full=C... 212 2e-53
(C6HGN3) RecName: Full=40S ribosomal protein S1; 212 2e-53
EF634836_1(EF634836|pid:none) Pristionchus maupasi small subunit... 212 2e-53
(B8NSD4) RecName: Full=40S ribosomal protein S1; &(Q2UTI8) RecN... 212 2e-53
(O94438) RecName: Full=40S ribosomal protein S1-B; AltName: Full... 211 3e-53
(A4R1I7) RecName: Full=40S ribosomal protein S1; 211 4e-53
S49366(S49366) ribosomal protein S0.e.B, cytosolic - yeast (Cand... 211 4e-53
(Q756Y3) RecName: Full=40S ribosomal protein S1; &AE016818_485(... 211 4e-53
(A7A1W1) RecName: Full=40S ribosomal protein S1-A; &(B3RHV0) Re... 210 7e-53
FN393080_266(FN393080|pid:none) Saccharomyces cerevisiae EC1118 ... 210 9e-53
CS559766_1(CS559766|pid:none) Sequence 353 from Patent WO2006032... 209 1e-52
(B2CAZ2) RecName: Full=40S ribosomal protein S3a; AltName: Full=... 209 1e-52
(A6ZM02) RecName: Full=40S ribosomal protein S1-B; &(B3LLJ2) Re... 209 1e-52
(C4XZU6) RecName: Full=40S ribosomal protein S1-B; 209 1e-52
EZ423732_1(EZ423732|pid:none) TSA: Glossina morsitans morsitans ... 209 2e-52
FJ774870_1(FJ774870|pid:none) Scylla paramamosain S3Ae ribosomal... 209 2e-52
GU130130_1(GU130130|pid:none) Bursaphelenchus xylophilus 40S rib... 209 2e-52
(C4R853) RecName: Full=40S ribosomal protein S1; &FN392322_546(... 208 3e-52
FN984786_1(FN984786|pid:none) Microcosmus squamiger mRNA for sma... 207 4e-52
CP002497_147(CP002497|pid:none) Eremothecium cymbalariae DBVPG#7... 207 4e-52
JP593133_1(JP593133|pid:none) TSA: Triatoma rubida Triru-107 mRN... 205 3e-51
(A3LUW5) RecName: Full=40S ribosomal protein S1-A; &CP000499_73... 204 4e-51
JO844904_1(JO844904|pid:none) TSA: Amblyomma maculatum Am-10635 ... 204 5e-51
GU373028_1(GU373028|pid:none) Amphidinium carterae strain CCMP13... 204 5e-51
(B6JWF7) RecName: Full=40S ribosomal protein S1; 204 6e-51
(Q09781) RecName: Full=40S ribosomal protein S1-A; AltName: Full... 203 8e-51
(Q4MYZ4) RecName: Full=40S ribosomal protein S3a; 203 8e-51
(Q6BSE4) RecName: Full=40S ribosomal protein S1-A; &CR382136_40... 203 1e-50
FN315293_1(FN315293|pid:none) Schistosoma japonicum isolate Anhu... 202 2e-50
(Q4UB86) RecName: Full=40S ribosomal protein S3a; &CR940352_673... 201 5e-50
AK296121_1(AK296121|pid:none) Homo sapiens cDNA FLJ51870 complet... 199 1e-49
(Q9XEG7) RecName: Full=40S ribosomal protein S3a; &AF093109_1(A... 199 2e-49
(A5DVF8) RecName: Full=40S ribosomal protein S1; 199 2e-49
EU558333_1(EU558333|pid:none) Phoronis muelleri putative 40S rib... 199 2e-49
AY232076_1(AY232076|pid:none) Drosophila yakuba clone yak-ad_RpS... 196 1e-48
(O97313) RecName: Full=40S ribosomal protein S3a; &AL034559_37(... 192 3e-47
(A5K7J8) RecName: Full=40S ribosomal protein S3a; 191 4e-47
(Q23DE3) RecName: Full=40S ribosomal protein S3a; 190 1e-46
EF085220_1(EF085220|pid:none) Picea sitchensis clone WS0273_M24 ... 188 4e-46
AY383658_1(AY383658|pid:none) Rattus norvegicus LRRGT00003 mRNA,... 187 8e-46
EU124932_1(EU124932|pid:none) Arenicola marina ribosomal protein... 176 1e-42
AB533220_1(AB533220|pid:none) Taenia taeniaeformis mRNA for Tt6 ... 172 2e-41
AB099017_1(AB099017|pid:none) Bos taurus mRNA for similar to rib... 170 1e-40
AE014135_5(AE014135|pid:none) Drosophila melanogaster chromosome... 170 1e-40
AY914942_1(AY914942|pid:none) Schistosoma japonicum SJCHGC01276 ... 170 1e-40
FN357545_8(FN357545|pid:none) Schistosoma mansoni genome sequenc... 169 2e-40
AM849484_1(AM849484|pid:none) Pomphorhynchus laevis partial mRNA... 163 1e-38
CP000882_96(CP000882|pid:none) Hemiselmis andersenii chromosome ... 162 2e-38
(Q4DZ41) RecName: Full=40S ribosomal protein S3a-2; 160 8e-38
(A4HM77) RecName: Full=40S ribosomal protein S3a; &AM494971_43(... 157 5e-37
(A4IAU0) RecName: Full=40S ribosomal protein S3a-1; &AM502253_4... 156 1e-36
(A4IAU1) RecName: Full=40S ribosomal protein S3a-2; &(Q4FX73) R... 156 1e-36
HE575323_324(HE575323|pid:none) Trypanosoma congolense IL3000 an... 155 3e-36
FJ384979_1(FJ384979|pid:none) Bombina orientalis ribosomal prote... 150 1e-34
BT055335_1(BT055335|pid:none) Zea mays full-length cDNA clone ZM... 130 1e-28
AE014135_6(AE014135|pid:none) Drosophila melanogaster chromosome... 127 8e-28
(C4VBI8) RecName: Full=40S ribosomal protein S1; 125 2e-27
FP565867_1(FP565867|pid:none) Brachiola algerae, 40S ribosomal p... 123 1e-26
CP002174_74(CP002174|pid:none) Cryptomonas paramecium strain CCA... 122 2e-26
AM048963_1(AM048963|pid:none) Eucinetus sp. APV-2005 partial mRN... 120 7e-26
AB098918_1(AB098918|pid:none) Bos taurus mRNA for similar to rib... 117 6e-25
AB098785_1(AB098785|pid:none) Bos taurus mRNA for similar to rib... 117 1e-24
EZ000612_1(EZ000612|pid:none) TSA: Culex tarsalis Ctar-83 40S ri... 114 7e-24
(Q9AW90) RecName: Full=40S ribosomal protein S3a; &AJ010592_18(... 114 9e-24
AX884862_1(AX884862|pid:none) Sequence 725 from Patent EP1033401. 112 3e-23
CP001946_20(CP001946|pid:none) Encephalitozoon intestinalis ATCC... 112 3e-23
CS560138_1(CS560138|pid:none) Sequence 725 from Patent WO2006032... 110 1e-22
CP003117_1559(CP003117|pid:none) Methanosaeta harundinacea 6Ac, ... 99 3e-19
CP000300_2165(CP000300|pid:none) Methanococcoides burtonii DSM 6... 98 6e-19
(Q8TVD1) RecName: Full=30S ribosomal protein S3Ae; &AE009439_14... 96 3e-18
CP001899_2419(CP001899|pid:none) Ferroglobus placidus DSM 10642,... 96 3e-18
(A3MVE0) RecName: Full=30S ribosomal protein S3Ae; &CP000561_11... 92 3e-17
CP001688_2093(CP001688|pid:none) Halomicrobium mukohataei DSM 12... 91 6e-17
CP002565_2768(CP002565|pid:none) Methanosaeta concilii GP-6, com... 91 8e-17
(Q46AN4) RecName: Full=30S ribosomal protein S3Ae; &CP000099_20... 90 1e-16
(Q8TZE1) RecName: Full=30S ribosomal protein S3Ae; &AE009950_20... 90 1e-16
FJ478025_1(FJ478025|pid:none) Rimicaris exoculata ribosomal prot... 90 2e-16
(Q5V296) RecName: Full=30S ribosomal protein S3Ae; &AY596297_12... 88 5e-16
(O57803) RecName: Full=30S ribosomal protein S3Ae; &A71225(A712... 88 7e-16
CP002100_1937(CP002100|pid:none) Vulcanisaeta distributa DSM 144... 87 9e-16
(Q8Q0F2) RecName: Full=30S ribosomal protein S3Ae; &AE008384_18... 87 1e-15
(Q8TKI9) RecName: Full=30S ribosomal protein S3Ae; 87 1e-15
AJ248283_68(AJ248283|pid:none) Pyrococcus abyssi GE5 complete ge... 86 2e-15
(Q9V2K7) RecName: Full=30S ribosomal protein S3Ae; 86 2e-15
CP002069_207(CP002069|pid:none) Methanohalobium evestigatum Z-73... 86 3e-15
(Q8ZT21) RecName: Full=30S ribosomal protein S3Ae; &AE009441_24... 85 6e-15
(Q5JGM4) RecName: Full=30S ribosomal protein S3Ae; &AP006878_12... 84 1e-14
CP002372_897(CP002372|pid:none) Thermococcus barophilus MP, comp... 83 2e-14
(C5A552) RecName: Full=30S ribosomal protein S3Ae; &CP001398_86... 83 2e-14
CP001787_541(CP001787|pid:none) Methanocaldococcus vulcanius M7,... 82 3e-14
(Q4JB17) RecName: Full=30S ribosomal protein S3Ae; &CP000077_58... 82 3e-14
CP002838_1077(CP002838|pid:none) Pyrolobus fumarii 1A, complete ... 82 3e-14
AM114193_868(AM114193|pid:none) Uncultured methanogenic archaeon... 82 4e-14
CP002101_1379(CP002101|pid:none) Methanosalsum zhilinae DSM 4017... 81 6e-14
(C6A3X6) RecName: Full=30S ribosomal protein S3Ae; &CP001463_12... 81 6e-14
CP002920_508(CP002920|pid:none) Thermococcus sp. 4557, complete ... 81 8e-14
(Q9YCV8) RecName: Full=30S ribosomal protein S3Ae; &BA000002_77... 81 8e-14
CP002737_661(CP002737|pid:none) Methanotorris igneus Kol 5, comp... 80 1e-13
CP002051_1555(CP002051|pid:none) Staphylothermus hellenicus DSM ... 80 1e-13
D64422(D64422)ribosomal protein S3a - Methanococcus jannaschii 80 1e-13
(P54059) RecName: Full=30S ribosomal protein S3Ae; &L77117_1002... 80 1e-13
DQ118403_36(DQ118403|pid:none) Uncultured euryarchaeote Alv-FOS1... 80 2e-13
CP001696_1374(CP001696|pid:none) Methanocaldococcus fervens AG86... 80 2e-13
CP002278_131(CP002278|pid:none) Methanothermus fervidus DSM 2088... 80 2e-13
AK318918_1(AK318918|pid:none) Arabidopsis thaliana AT4G34670 mRN... 80 2e-13
CP001710_176(CP001710|pid:none) Methanothermobacter marburgensis... 79 2e-13
CP000743_747(CP000743|pid:none) Methanococcus aeolicus Nankai-3,... 79 4e-13
AE010299_3329(AE010299|pid:none) Methanosarcina acetivorans str.... 79 4e-13
CP001939_1326(CP001939|pid:none) Thermosphaera aggregans DSM 114... 78 5e-13
(C3MQ36) RecName: Full=30S ribosomal protein S3Ae; &(C3MVF4) Re... 78 7e-13
CP002792_1300(CP002792|pid:none) Methanothermococcus okinawensis... 77 9e-13
CP001860_1385(CP001860|pid:none) Haloterrigena turkmenica DSM 55... 77 2e-12
CP001932_2366(CP001932|pid:none) Natrialba magadii ATCC 43099, c... 77 2e-12
(A6USE4) RecName: Full=30S ribosomal protein S3Ae; &CP000742_15... 77 2e-12
(Q975F8) RecName: Full=30S ribosomal protein S3Ae; &BA000023_50... 75 3e-12
(Q18HQ7) RecName: Full=30S ribosomal protein S3Ae; &AM180088_14... 75 3e-12
CP000493_413(CP000493|pid:none) Hyperthermus butylicus DSM 5456,... 75 3e-12
CP002839_2141(CP002839|pid:none) Halopiger xanaduensis SH-6, com... 75 5e-12
(A5UKY8) RecName: Full=30S ribosomal protein S3Ae; &CP000678_66... 75 5e-12
CP000866_1508(CP000866|pid:none) Nitrosopumilus maritimus SCM1, ... 74 8e-12
(B8GFN8) RecName: Full=30S ribosomal protein S3Ae; &CP001338_25... 74 8e-12
GU131153_1(GU131153|pid:none) Plutella xylostella ribosomal prot... 74 1e-11
CP002057_909(CP002057|pid:none) Methanococcus voltae A3, complet... 74 1e-11
EF089401_14(EF089401|pid:none) Uncultured marine bacterium HF10_... 73 2e-11
CP001719_460(CP001719|pid:none) Methanobrevibacter ruminantium M... 72 3e-11
(A9A7B4) RecName: Full=30S ribosomal protein S3Ae; &CP000867_21... 72 3e-11
(B7XMD2) RecName: Full=40S ribosomal protein S1; 72 4e-11
CP001690_2047(CP001690|pid:none) Halogeometricum borinquense DSM... 72 4e-11
CP002913_572(CP002913|pid:none) Methanococcus maripaludis X1, co... 71 7e-11
CP002988_318(CP002988|pid:none) Halophilic archaeon DL31, comple... 71 7e-11
CR860858_1(CR860858|pid:none) Pongo abelii mRNA; cDNA DKFZp469E1... 71 8e-11
CP002009_1363(CP002009|pid:none) Methanocaldococcus infernus ME,... 70 2e-10
AP011837_39(AP011837|pid:none) Candidatus Caldiarchaeum subterra... 70 2e-10
CP002098_1054(CP002098|pid:none) Ignisphaera aggregans DSM 17230... 69 3e-10
(B9LTT6) RecName: Full=30S ribosomal protein S3Ae; &CP001365_61... 69 3e-10
EF558552_7(EF558552|pid:none) Halorubrum sp. TP009 clone 4 seque... 69 4e-10
CP002656_1980(CP002656|pid:none) Metallosphaera cuprina Ar-4, co... 69 4e-10
AY550075_1(AY550075|pid:none) Sus scrofa 40S ribosomal protein S... 67 9e-10
CP000852_1724(CP000852|pid:none) Caldivirga maquilingensis IC-16... 67 1e-09
(A8AAU3) RecName: Full=30S ribosomal protein S3Ae; &CP000816_86... 66 2e-09
(A3CSL0) RecName: Full=30S ribosomal protein S3Ae; &CP000562_42... 66 3e-09
(Q2FS35) RecName: Full=30S ribosomal protein S3Ae; &CP000254_24... 63 2e-08
HM229999_1(HM229999|pid:none) Candidatus Nitrososphaera gargensi... 62 5e-08
AB027994_1(AB027994|pid:none) Schizosaccharomyces pombe gene for... 61 7e-08
(A7IAJ1) RecName: Full=30S ribosomal protein S3Ae; &CP000780_22... 61 9e-08
EU963400_1(EU963400|pid:none) Zea mays clone 261912 unknown mRNA. 61 9e-08
S62679(S62679)ribosomal protein S3a, cytosolic - Emericella nidu... 59 3e-07
EU016664_12(EU016664|pid:none) Uncultured marine microorganism H... 57 1e-06
EU016635_21(EU016635|pid:none) Uncultured Group I marine crenarc... 57 2e-06
DQ158857_52(DQ158857|pid:none) Bigelowiella natans nucleomorph c... 56 3e-06
(A2SQ57) RecName: Full=30S ribosomal protein S3Ae; &CP000559_28... 55 4e-06
CP000968_1366(CP000968|pid:none) Candidatus Korarchaeum cryptofi... 53 2e-05
EF576486_1(EF576486|pid:none) Oryza sativa (indica cultivar-grou... 50 2e-04
AK220818_1(AK220818|pid:none) Arabidopsis thaliana mRNA for 40S ... 46 0.002
DQ675535_1(DQ675535|pid:none) Diaphorina citri clone WHDc0001 ri... 46 0.003
AB098832_1(AB098832|pid:none) Bos taurus mRNA for similar to rib... 46 0.003
AY909417_1(AY909417|pid:none) Siniperca chuatsi clone C175 40S r... 45 0.004
EU971458_1(EU971458|pid:none) Zea mays clone 365353 unknown mRNA. 45 0.007
AF117889_1(AF117889|pid:none) Avena fatua 40S ribosomal protein ... 45 0.007
Z18417_1(Z18417|pid:none) Arabidopsis thaliana transcribed seque... 43 0.025
GU784915_1(GU784915|pid:none) Volvox carteri f. nagariensis fema... 41 0.072
DQ214673_1(DQ214673|pid:none) Taeniopygia guttata clone 0061P000... 39 0.27
GU942967_1(GU942967|pid:none) Uncultured archaeon MedDCM-OCT-S05... 39 0.27
CP002638_3104(CP002638|pid:none) Verrucosispora maris AB-18-032,... 32 0.42
CP001708_825(CP001708|pid:none) Anaerococcus prevotii DSM 20548,... 35 6.7
AF097331_1(AF097331|pid:none) Trypanosoma brucei rhodesiense lyt... 34 8.8
CP001134_30(CP001134|pid:none) Vibrio fischeri MJ11 plasmid pMJ1... 34 8.8
CP003117_501(CP003117|pid:none) Methanosaeta harundinacea 6Ac, c... 34 8.8
CP001841_302(CP001841|pid:none) Treponema azotonutricium ZAS-9, ... 34 8.8
>(Q54ZW5) RecName: Full=40S ribosomal protein S3a;
Length = 273
Score = 471 bits (1212), Expect = e-131
Identities = 240/240 (100%), Positives = 240/240 (100%)
Frame = +3
Query: 36 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMKDD 215
VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMKDD
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMKDD 75
Query: 216 ESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLR 395
ESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLR
Sbjct: 76 ESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDGYFLR 135
Query: 396 VFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTVVDYLIGVSLNGV 575
VFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTVVDYLIGVSLNGV
Sbjct: 136 VFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTVVDYLIGVSLNGV 195
Query: 576 TTNASGFAPTLAEKIRIEGSSIFPIHNVFIRKVKVLKTPKVDAAKLSELYASSATSTIAP 755
TTNASGFAPTLAEKIRIEGSSIFPIHNVFIRKVKVLKTPKVDAAKLSELYASSATSTIAP
Sbjct: 196 TTNASGFAPTLAEKIRIEGSSIFPIHNVFIRKVKVLKTPKVDAAKLSELYASSATSTIAP 255
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5349213
Number of Hits to DB: 1,968,823,673
Number of extensions: 37895664
Number of successful extensions: 95207
Number of sequences better than 10.0: 311
Number of HSP's gapped: 94616
Number of HSP's successfully gapped: 312
Length of query: 291
Length of database: 1,732,582,204
Length adjustment: 131
Effective length of query: 160
Effective length of database: 1,031,835,301
Effective search space: 165093648160
Effective search space used: 165093648160
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
Dictyostelium discoideum cDNA Project Home