Dictyostelium discoideum cDNA Clone FC-AK10

Size:		591
3' sequence:	AK970107
5' sequence:	-
Whole insert?:	Y
Accession #:	C23696
Remarks:	*

Sequence FC-AK10

GCCTCACTCA TTCGGTCTCC GTGCTCGTAC CAGATACTTG TTCTCTCGTG
GTTTCAGAAA CCATGGTCTC TTACAAACCA CCACCTTCTT AAGAACTTTC
CGTTTAGGTG ATTACGTTGA TATCAAAGCC ACCGGTAATG TACACAAAGG
TATGCCACAC AAATTCTACC ACGGTCGTAC CGGTCGTGTT TGGAATGTTA
CTCCACGTGC TGTTGGTGTC ATCATCAACA AACGTGTTGG TCCAAGAATC
ATTGCCAAGA AAATCCACGT CAGAACTGAA CACGTCAAAC CATCAAACTC
CATGGCTGCT CACTTAAAAC GTATCCAAGA AAACAAAAAA GCTGTCGTTG
AAGCCAAGAA AGCCGGTAAA TGGGTCGATG TTAGACGTAA CCCAGCTGCA
CCAAAGGACG GTTTCTTTGT CAACCCAAGA AACACTGAAT TCGTTGAAGT
CAAACCAGTC AAATACGAAC TTTTATTATA AATTAATTTA AAAGAGTGGT
GGCTAATATG GTTCAATCGC AATCCTTTGA TTATCCAAAT TTGTCTTATT
TAAAAAGAAA AATAAAAAAA AATATAAAAA AAAAAAAATA T

Translated Amino Acid Sequence FC-AK10

PHSFGLRARTRYLFSRGFRNHGLLQTTTFLRTFRLGDYVDIKATGNVHKGMPHKFYHGRT
GRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPSNSMAAHLKRIQENKKAVVEAKK
AGKWVDVRRNPAAPKDGFFVNPRNTEFVEVKPVKYELLL*inlkewwliwfnrnpliiqi
cli*kek*kki*kkkn

Homology FC-AK10 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VSF754 (VSF754Q) /CSM/VS/VSF7-C/VSF754Q.Seq.d/                       1092   0.0
VSB311 (VSB311Q) /CSM/VS/VSB3-A/VSB311Q.Seq.d/                       1092   0.0
VSA718 (VSA718Q) /CSM/VS/VSA7-A/VSA718Q.Seq.d/                       1092   0.0
VSA693 (VSA693Q) /CSM/VS/VSA6-D/VSA693Q.Seq.d/                       1092   0.0
VHK774 (VHK774Q) /CSM/VH/VHK7-D/VHK774Q.Seq.d/                       1092   0.0
VHH523 (VHH523Q) /CSM/VH/VHH5-A/VHH523Q.Seq.d/                       1092   0.0
VFL168 (VFL168Q) /CSM/VF/VFL1-C/VFL168Q.Seq.d/                       1092   0.0
VFJ214 (VFJ214Q) /CSM/VF/VFJ2-A/VFJ214Q.Seq.d/                       1092   0.0
FC-AK10 (FC-AK10Q) /CSM/FC/FC-AK/FC-AK10Q.Seq.d/                     1092   0.0
FC-193 (FC-193Q) /CSM/CG/CG-FC/FC-193Q.Seq.d/                        1092   0.0

Homology FC-AK10 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


BQ153144|BQ153144.1 NF031B08IR1F1063 Irradiated Medicago tru...    96   6e-16  1
BE203333|BE203333.1 EST403355 KV1 Medicago truncatula cDNA c...    96   6e-16  1
AL370150|AL370150.1 Medicago truncatula EST MtBA36A09F1 : T3...    96   6e-16  1
BE124671|BE124671.1 EST393706 GVN Medicago truncatula cDNA c...    96   6e-16  1
AJ502255|AJ502255.1 Medicago truncatula EST, clone mtgmadc12...    96   6e-16  1
AW573675|AW573675.1 EST316266 GVN Medicago truncatula cDNA c...    96   6e-16  1
BF634630|BF634630.1 NF064C11DT1F1085 Drought Medicago trunca...    96   6e-16  1
AJ498414|AJ498414.1 Medicago truncatula EST, clone mt--acc95...    96   6e-16  1
BQ154523|BQ154523.1 NF073C12IR1F1098 Irradiated Medicago tru...    96   6e-16  1
AW682908|AW682908.2 NF001G03LF1F1023 Developing leaf Medicag...    96   6e-16  1

Homology FC-AK10 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54X53) RecName: Full=60S ribosomal protein L21;                     266   4e-70
FN357335_1(FN357335|pid:none) Schistosoma mansoni genome sequenc...   153   6e-36
AY813279_1(AY813279|pid:none) Schistosoma japonicum SJCHGC00639 ...   149   9e-35
GN110337_1(GN110337|pid:none) Sequence 15118 from Patent WO20090...   148   2e-34
GN110445_1(GN110445|pid:none) Sequence 15226 from Patent WO20090...   147   3e-34
GN110339_1(GN110339|pid:none) Sequence 15120 from Patent WO20090...   147   4e-34
GN110301_1(GN110301|pid:none) Sequence 15082 from Patent WO20090...   145   1e-33
GN110441_1(GN110441|pid:none) Sequence 15222 from Patent WO20090...   145   1e-33
GN110311_1(GN110311|pid:none) Sequence 15092 from Patent WO20090...   145   1e-33
EF146128_1(EF146128|pid:none) Populus trichocarpa clone WS0115_L...   145   1e-33

Homology FC-AK10 vs Genome