Dictyostelium discoideum cDNA Clone FC-AH11

Size:		1252
3' sequence:	HS961121
5' sequence:	AK961206
Whole insert?:	Y
Accession #:	-
Remarks:	*

Sequence FC-AH11

GGTGAAGATG TTCAAGCTTT AGTTATTGAT AACGGTTCTG GTATGTGTAA
AGCCGGTTTT GCTGGTGATG ATGCTCCACG TGCTGTTTTC CCATCAATTG
TTGGTCGTCC AAGACACACT GGTGTTATGG TCGGTATGGG TCAAAAGGAT
TCATATGTAG GTGATGAAGC TCAATCAAAA AGAGGTATCT TAACTCTCAA
ATATCCAATT GAACATGGAA TTGTCACCAA TTGGGATGAT ATGGAAAAGA
TCTGGCATCA TACTTTCTAC AATGAACTTC GTGTTGCACC AGAAGAACAT
CCAGTTCTCT TAACCGAAGC ACCATTAAAT CCAAAAGCAA ACAGAGAAAA
GATGACTCAA ATTATGTTTG AAACTTTCAA CACTCCAGCT ATGTACGTTG
CCATTCAAGC TGTCTTATCA TTATATGCCT CTGGTCGTAC CACTGGTATC
GTTATGGATT CAGGTGATGG TGTCTCCCAC ACTGTACCAA TCTATGAAGG
TTATGCTTTA CCACATGCCA TCTTACGTTT AGATTTAGCA GGTCGTGATC
TTACTGATTA CATGATGAAA ATCTTAACTG AACGTGGTTA CTCATTCACC
ACCACCGCCG AAAGAGAAAT TGTCAGAGAT ATCAAAGAAA AATTAGCATA
CGTCGCCCTC GACTTTGAAG CTGAAATGCA AACTGCTGCC TCATCATCAG
CATTAGAGAA ATCATATGAA TTACCAGATG GTCAAGTTAT CACAATTGGT
AATGAACGTT TCCGTTGTCC AGAAGCTCTC TTCCAACCAT CATTCTTAGG
TATGGAATCA GCAGGTATTC ACGAAACCAC ATACAATTCA ATCATGAAAT
GTGATGTCGA TATTCGTAAA GATTTATATG GTAATGTTGT ATTATCAGGT
GGTACAACTA TGTTCCCAGG TATTGCAGAT CGTATGAACA AAGAATTAAC
TGCATTAGCA CCATCAACAA TGAAAATCAA AATCATTGCA CCACCAGAAC
GTAAATACTC AGTCTGGATT GGTGGATCTA TTTTAGCTTC ACTCTCAACT
TTCCAACAAA TGTGGATTTC AAAAGAAGAA TATGACGAAT CTGGTCCATC
AATTGTTCAC AGAAAATGTT TCTAAATTTA GTGATGAAAG TGCTTCTCAC
ACAAAAATTA TTATATATGT ACAATAATAA CAATAAAATA TAACTTTTTC
TTTGTATAGT CGTTGATCTT TATCCGGCCT TCAAAAAAAA AAAAAAAAAA
AA

Translated Amino Acid Sequence FC-AH11

GEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSK
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLA
GRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYE
LPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSG
GTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE
YDESGPSIVHRKCF*i***kcfshknyyictiitikynfffv*slifirpskkkkkk

Homology FC-AH11 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


FC-AH11 (FC-AH11Q) /CSM/FC/FC-AH/FC-AH11Q.Seq.d/                     2442   0.0
VFK236 (VFK236Q) /CSM/VF/VFK2-B/VFK236Q.Seq.d/                       2331   0.0
VFB424 (VFB424Q) /CSM/VF/VFB4-A/VFB424Q.Seq.d/                       2319   0.0
VFL865 (VFL865Q) /CSM/VF/VFL8-C/VFL865Q.Seq.d/                       2212   0.0
VFD343 (VFD343Q) /CSM/VF/VFD3-B/VFD343Q.Seq.d/                       1780   0.0
VFL794 (VFL794Q) /CSM/VF/VFL7-D/VFL794Q.Seq.d/                       1768   0.0
VFD357 (VFD357Q) /CSM/VF/VFD3-C/VFD357Q.Seq.d/                       1764   0.0
VFJ168 (VFJ168Q) /CSM/VF/VFJ1-C/VFJ168Q.Seq.d/                       1762   0.0
VFD511 (VFD511Q) /CSM/VF/VFD5-A/VFD511Q.Seq.d/                       1756   0.0
SFC770 (SFC770Q) /CSM/SF/SFC7-C/SFC770Q.Seq.d/                       1756   0.0

Homology FC-AH11 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


AC116956|AC116956.2 Dictyostelium discoideum chromosome 2 ma...  2442   0.0    13
X03282|X03282.1 dictyostelium discoideum gene for actin A12.     2175   0.0    1
AC115577|AC115577.2 Dictyostelium discoideum chromosome 2 ma...  1796   0.0    10
AC116986|AC116986.2 Dictyostelium discoideum chromosome 2 ma...  1788   0.0    4
AC116305|AC116305.2 Dictyostelium discoideum chromosome 2 ma...  1772   0.0    1
M14146|M14146.1 D.discoideum actin 15 gene, complete cds.        1735   0.0    2
AC115579|AC115579.2 Dictyostelium discoideum chromosome 2 ma...  1735   0.0    7
AC116957|AC116957.2 Dictyostelium discoideum chromosome 2 ma...  1661   0.0    15
X03281|X03281.1 Dictyostelium discoideum gene for actin A8.      1659   0.0    1
X03283|X03283.1 Dictyostelium discoideum gene for actin A3-S1.   1491   0.0    1

Homology FC-AH11 vs Protein

Sequences producing significant alignments:                      (bits) Value


(Q54H30) RecName: Full=Major actin; AltName: Full=Actin A1; AltN...   754   0.0
ATDO(A93223;A92871;S67999;A03004)actin - slime mold (Dictyosteli...   750   0.0
(Q553U6) RecName: Full=Putative actin-22;  &AC116305_3(AC116305|...   750   0.0
(P02576) RecName: Full=Actin, plasmodial isoform;  &ATFY(A29044;...   749   0.0
B23412(B23412)actin 12 - slime mold (Dictyostelium discoideum)        748   0.0
X03282_1(X03282|pid:none) dictyostelium discoideum gene for acti...   746   0.0
AK369759_1(AK369759|pid:none) Hordeum vulgare subsp. vulgare mRN...   740   0.0
(P07829) RecName: Full=Actin-3; AltName: Full=Actin-3-sub 1;          739   0.0
AY294154_1(AY294154|pid:none) Thecamoeba similis actin mRNA, com...   737   0.0
(P02578) RecName: Full=Actin-1;  &ATAX(A92886;A03004) &V00002_1(...   737   0.0

Homology FC-AH11 vs Genome